RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 NPLQ9BXD5 320 aaPredicted RBP13.76□□□□□ -0.21
HMGA1-203ENST00000374116 MROQ9BYG7 248 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 TPK1Q9H3S4 243 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 ALG2Q9H553 416 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 GAREM1Q9H706 876 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 CXorf21Q9HAI6 301 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 TM7SF3Q9NS93 570 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 GMPR2Q9P2T1 348 aaKnown RBP13.76□□□□□ -0.21
HMGA1-203ENST00000374116 PLEKHM1Q9Y4G2 1056 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 DHRS12A0PJE2 317 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 CFAP99D6REC4 459 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 SLC28A1O00337 649 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 RGS14O43566 566 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 WDR47O94967 919 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 CEACAM5P06731 702 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 CELA2BP08218 269 aaPredicted RBP13.76□□□□□ -0.21
HMGA1-203ENST00000374116 ALOX5P09917 674 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 EBLN1P0CF75 366 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 PSMA4P25789 261 aaKnown RBP13.76□□□□□ -0.21
HMGA1-203ENST00000374116 HTR1BP28222 390 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 CCR7P32248 378 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 BMXP51813 675 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 BNIP3Q12983 259 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 MAD2L1Q13257 205 aaPredicted RBP13.76□□□□□ -0.21
HMGA1-203ENST00000374116 ABRAXAS2Q15018 415 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 ALG11Q2TAA5 492 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 AP5B1Q2VPB7 878 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 AASDHQ4L235 1098 aaPredicted RBP13.76□□□□□ -0.21
HMGA1-203ENST00000374116 HMBOX1Q6NT76 420 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 GALNT13Q8IUC8 556 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 SPPL2CQ8IUH8 684 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 CCL4L1Q8NHW4 92 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 DNAJB14Q8TBM8 379 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 TANKQ92844 425 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 COX14Q96I36 57 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 KCTD14Q9BQ13 255 aaPredicted RBP13.76□□□□□ -0.21
HMGA1-203ENST00000374116 DCUN1D5Q9BTE7 237 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 NTMT1Q9BV86 223 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 GPR27Q9NS67 375 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 RAD18Q9NS91 495 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 TRPS1Q9UHF7 1281 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 CDC14AQ9UNH5 594 aa13.76□□□□□ -0.21
HMGA1-203ENST00000374116 PTPRZ1P23471 2315 aaPredicted RBP13.75□□□□□ -0.21
HMGA1-203ENST00000374116 PRSS38A1L453 326 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 OR2AG2A6NM03 316 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 FAM47E-STBD1D6RA91 191 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 ARPC2O15144 300 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 SGTAO43765 313 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 GFRA3O60609 400 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 GPIP06744 558 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 ENO2P09104 434 aaPredicted RBP13.75□□□□□ -0.21
HMGA1-203ENST00000374116 OR56A5P0C7T3 313 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 ZNF8P17098 575 aaPredicted RBP13.75□□□□□ -0.21
HMGA1-203ENST00000374116 JAK1P23458 1154 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 AOAHP28039 575 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 AKT1P31749 480 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 GSK3BP49841 420 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 SRP54P61011 504 aaKnown RBP13.75□□□□□ -0.21
HMGA1-203ENST00000374116 YPEL5P62699 121 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 LIPEQ05469 1076 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 NR1D2Q14995 579 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 PLA2G4EQ3MJ16 856 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 TIGD2Q4W5G0 525 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 MTX3Q5HYI7 312 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 TBCELQ5QJ74 424 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 CRTC3Q6UUV7 619 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 CYP20A1Q6UW02 462 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 PRR23CQ6ZRP0 262 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 LINC00299Q6ZSB3 139 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 IQCHQ86VS3 1027 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 NLRP8Q86W28 1048 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 GATAD2AQ86YP4 633 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 KIAA2013Q8IYS2 634 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 BEND7Q8N7W2 519 aaPredicted RBP13.75□□□□□ -0.21
HMGA1-203ENST00000374116 SLC45A3Q96JT2 553 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 WDR92Q96MX6 357 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 YTHDF1Q9BYJ9 559 aaKnown RBP13.75□□□□□ -0.21
HMGA1-203ENST00000374116 C8orf4Q9NR00 106 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 UCKL1Q9NWZ5 548 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 KLQ9UEF7 1012 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 EGFL7Q9UHF1 273 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 CCL27Q9Y4X3 112 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 LRP4O75096 1905 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 FAM186AA6NE01 2351 aa13.75□□□□□ -0.21
HMGA1-203ENST00000374116 ZNF292O60281 2723 aa13.74□□□□□ -0.21
HMGA1-203ENST00000374116 AKAP10O43572 662 aa13.74□□□□□ -0.21
HMGA1-203ENST00000374116 NUAK1O60285 661 aa13.74□□□□□ -0.21
HMGA1-203ENST00000374116 TIPRLO75663 272 aa13.74□□□□□ -0.21
HMGA1-203ENST00000374116 ANXA5P08758 320 aa13.74□□□□□ -0.21
HMGA1-203ENST00000374116 UMPSP11172 480 aa13.74□□□□□ -0.21
HMGA1-203ENST00000374116 G6PDP11413 515 aa13.74□□□□□ -0.21
HMGA1-203ENST00000374116 ATP1B2P14415 290 aaPredicted RBP13.74□□□□□ -0.21
HMGA1-203ENST00000374116 EPB42P16452 691 aa13.74□□□□□ -0.21
HMGA1-203ENST00000374116 JUNDP17535 347 aa13.74□□□□□ -0.21
HMGA1-203ENST00000374116 HTR1EP28566 365 aa13.74□□□□□ -0.21
HMGA1-203ENST00000374116 GNPDA1P46926 289 aa13.74□□□□□ -0.21
HMGA1-203ENST00000374116 KIAA1024LP59773 190 aa13.74□□□□□ -0.21
HMGA1-203ENST00000374116 TMEM115Q12893 351 aaPredicted RBP13.74□□□□□ -0.21
HMGA1-203ENST00000374116 SHBQ15464 509 aa13.74□□□□□ -0.21
HMGA1-203ENST00000374116 PARGQ86W56 976 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms