RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 ANGPTL8Q6UXH0 198 aa18■□□□□ 0.47
USP49-202ENST00000373010 GET4Q7L5D6 327 aaPredicted RBP18■□□□□ 0.47
USP49-202ENST00000373010 CIDECQ96AQ7 238 aaPredicted RBP18■□□□□ 0.47
USP49-202ENST00000373010 ACAT2Q9BWD1 397 aa18■□□□□ 0.47
USP49-202ENST00000373010 RIBC2Q9H4K1 309 aa18■□□□□ 0.47
USP49-202ENST00000373010 SLC23A2Q9UGH3 650 aa18■□□□□ 0.47
USP49-202ENST00000373010 RAPGEFL1Q9UHV5 662 aa18■□□□□ 0.47
USP49-202ENST00000373010 ATP6V1HQ9UI12 483 aa18■□□□□ 0.47
USP49-202ENST00000373010 HCN2Q9UL51 889 aa18■□□□□ 0.47
USP49-202ENST00000373010 GPR34Q9UPC5 381 aa18■□□□□ 0.47
USP49-202ENST00000373010 DENND4AQ7Z401 1863 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 BCKDKO14874 412 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 MATN1P21941 496 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 HBA1P69905 142 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 RAPSNQ13702 412 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 VEZF1Q14119 521 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 COX20Q5RI15 118 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 EP400NLQ6ZTU2 488 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 HORMAD1Q86X24 394 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 CPA6Q8N4T0 437 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 OR13F1Q8NGS4 319 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 MYOCQ99972 504 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 GABARAPL1Q9H0R8 117 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 DPEP2Q9H4A9 486 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 PRSS16Q9NQE7 514 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 BAG5Q9UL15 447 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 TDRKHQ9Y2W6 561 aaKnown RBP17.99■□□□□ 0.47
USP49-202ENST00000373010 KIF26AQ9ULI4 1882 aaPredicted RBP17.99■□□□□ 0.47
USP49-202ENST00000373010 RNASET2O00584 256 aaKnown RBP17.99■□□□□ 0.47
USP49-202ENST00000373010 SLC16A6O15403 523 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 VEGFDO43915 354 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 C6orf47O95873 294 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 FSHRP23945 695 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 C2orf80Q0P641 193 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 BIRC2Q13490 618 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 SIM2Q14190 667 aaPredicted RBP17.99■□□□□ 0.47
USP49-202ENST00000373010 SKIV2LQ15477 1246 aaKnown RBP17.99■□□□□ 0.47
USP49-202ENST00000373010 PRSS53Q2L4Q9 553 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 RFX4Q33E94 735 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 SPARTQ8N0X7 666 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 PIK3C3Q8NEB9 887 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 CNIH3Q8TBE1 160 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 C16orf78Q8WTQ4 265 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 TBC1D20Q96BZ9 403 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 SORBS1Q9BX66 1292 aaKnown RBP17.99■□□□□ 0.47
USP49-202ENST00000373010 ASPSCR1Q9BZE9 553 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 TM7SF3Q9NS93 570 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 GPATCH2Q9NW75 528 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 PDP1Q9P0J1 537 aaPredicted RBP17.99■□□□□ 0.47
USP49-202ENST00000373010 AASSQ9UDR5 926 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 FAF1Q9UNN5 650 aaPredicted RBP17.99■□□□□ 0.47
USP49-202ENST00000373010 MAPRE3Q9UPY8 281 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 CFAP20Q9Y6A4 193 aaKnown RBP17.99■□□□□ 0.47
USP49-202ENST00000373010 COL4A3Q01955 1670 aa17.99■□□□□ 0.47
USP49-202ENST00000373010 DOCK9Q9BZ29 2069 aa17.98■□□□□ 0.47
USP49-202ENST00000373010 PCCBP05166 539 aa17.98■□□□□ 0.47
USP49-202ENST00000373010 KLK1P06870 262 aa17.98■□□□□ 0.47
USP49-202ENST00000373010 JUNBP17275 347 aaPredicted RBP17.98■□□□□ 0.47
USP49-202ENST00000373010 DNAJA1P31689 397 aaKnown RBP17.98■□□□□ 0.47
USP49-202ENST00000373010 CCR3P51677 355 aa17.98■□□□□ 0.47
USP49-202ENST00000373010 TAS2R50P59544 299 aa17.98■□□□□ 0.47
USP49-202ENST00000373010 MPEG1Q2M385 716 aa17.98■□□□□ 0.47
USP49-202ENST00000373010 ZC3H12BQ5HYM0 836 aaKnown RBP17.98■□□□□ 0.47
USP49-202ENST00000373010 PRAMEF14Q5SWL7 426 aa17.98■□□□□ 0.47
USP49-202ENST00000373010 PRAMEF13Q5VWM6 474 aa17.98■□□□□ 0.47
USP49-202ENST00000373010 HEATR4Q86WZ0 1026 aa17.98■□□□□ 0.47
USP49-202ENST00000373010 ZNF420Q8TAQ5 688 aaPredicted RBP17.98■□□□□ 0.47
USP49-202ENST00000373010 DOK1Q99704 481 aa17.98■□□□□ 0.47
USP49-202ENST00000373010 TUBA1CQ9BQE3 449 aa17.98■□□□□ 0.47
USP49-202ENST00000373010 LGR4Q9BXB1 951 aa17.98■□□□□ 0.47
USP49-202ENST00000373010 BHLHE41Q9C0J9 482 aaPredicted RBP17.98■□□□□ 0.47
USP49-202ENST00000373010 EHD1Q9H4M9 534 aa17.98■□□□□ 0.47
USP49-202ENST00000373010 SAMHD1Q9Y3Z3 626 aaKnown RBP17.98■□□□□ 0.47
USP49-202ENST00000373010 GCM2O75603 506 aaPredicted RBP17.98■□□□□ 0.47
USP49-202ENST00000373010 FURINP09958 794 aa17.98■□□□□ 0.47
USP49-202ENST00000373010 ITGAMP11215 1152 aa17.98■□□□□ 0.47
USP49-202ENST00000373010 ETFAP13804 333 aa17.98■□□□□ 0.47
USP49-202ENST00000373010 EN2P19622 333 aaPredicted RBP17.98■□□□□ 0.47
USP49-202ENST00000373010 FPR1P21462 350 aa17.98■□□□□ 0.47
USP49-202ENST00000373010 PPIBP23284 216 aaKnown RBP17.98■□□□□ 0.47
USP49-202ENST00000373010 OPRD1P41143 372 aa17.98■□□□□ 0.47
USP49-202ENST00000373010 CRATP43155 626 aa17.98■□□□□ 0.47
USP49-202ENST00000373010 IL5RAQ01344 420 aa17.98■□□□□ 0.47
USP49-202ENST00000373010 TANGO2Q6ICL3 276 aa17.98■□□□□ 0.47
USP49-202ENST00000373010 VN1R5Q7Z5H4 357 aa17.98■□□□□ 0.47
USP49-202ENST00000373010 KIAA1958Q8N8K9 716 aa17.98■□□□□ 0.47
USP49-202ENST00000373010 GAB3Q8WWW8 586 aa17.98■□□□□ 0.47
USP49-202ENST00000373010 LHPPQ9H008 270 aa17.98■□□□□ 0.47
USP49-202ENST00000373010 ZNF282Q9UDV7 671 aaPredicted RBP17.98■□□□□ 0.47
USP49-202ENST00000373010 ACSL6Q9UKU0 697 aa17.98■□□□□ 0.47
USP49-202ENST00000373010 ATG2AQ2TAZ0 1938 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 TRANK1O15050 2925 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 A0A1W2PPW3 197 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 IGLON5A6NGN9 336 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 C1QTNF3-AMACRE9PGA6 284 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 SLC1A7O00341 560 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 PCGF2P35227 344 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 WASP42768 502 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 STT3AP46977 705 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 ARHGDIAP52565 204 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms