RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 CD53P19397 219 aa14.83□□□□□ -0.04
COL5A1-201ENST00000371817 MASP1P48740 699 aa14.83□□□□□ -0.04
COL5A1-201ENST00000371817 HTD2P86397 168 aa14.83□□□□□ -0.04
COL5A1-201ENST00000371817 PEA15Q15121 130 aa14.83□□□□□ -0.04
COL5A1-201ENST00000371817 WASH2PQ6VEQ5 465 aa14.83□□□□□ -0.04
COL5A1-201ENST00000371817 OR13J1Q8NGT2 312 aa14.83□□□□□ -0.04
COL5A1-201ENST00000371817 BCL7BQ9BQE9 202 aa14.83□□□□□ -0.04
COL5A1-201ENST00000371817 DUXAA6NLW8 204 aa14.83□□□□□ -0.04
COL5A1-201ENST00000371817 RECQL4O94761 1208 aa14.83□□□□□ -0.04
COL5A1-201ENST00000371817 EFNA1P20827 205 aaPredicted RBP14.83□□□□□ -0.04
COL5A1-201ENST00000371817 NFKB2Q00653 900 aa14.83□□□□□ -0.04
COL5A1-201ENST00000371817 NPLQ9BXD5 320 aaPredicted RBP14.83□□□□□ -0.04
COL5A1-201ENST00000371817 TMEM100Q9NV29 134 aa14.83□□□□□ -0.04
COL5A1-201ENST00000371817 EVA1BQ9NVM1 165 aa14.83□□□□□ -0.04
COL5A1-201ENST00000371817 SAGE1Q9NXZ1 904 aa14.83□□□□□ -0.04
COL5A1-201ENST00000371817 FRMPD1Q5SYB0 1578 aa14.83□□□□□ -0.04
COL5A1-201ENST00000371817 INPPL1O15357 1258 aa14.83□□□□□ -0.04
COL5A1-201ENST00000371817 GSK3BP49841 420 aa14.83□□□□□ -0.04
COL5A1-201ENST00000371817 POU4F3Q15319 338 aa14.83□□□□□ -0.04
COL5A1-201ENST00000371817 TMEM198Q66K66 360 aa14.83□□□□□ -0.04
COL5A1-201ENST00000371817 MUS81Q96NY9 551 aa14.83□□□□□ -0.04
COL5A1-201ENST00000371817 CACNG6Q9BXT2 260 aa14.83□□□□□ -0.04
COL5A1-201ENST00000371817 C1QTNF3-AMACRE9PGA6 284 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 PNPP00491 289 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 PRKCGP05129 697 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 DGKGP49619 791 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 FABP6P51161 128 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 FBXO16Q8IX29 292 aaPredicted RBP14.82□□□□□ -0.04
COL5A1-201ENST00000371817 SAMD14Q8IZD0 417 aaPredicted RBP14.82□□□□□ -0.04
COL5A1-201ENST00000371817 TMEM151AQ8N4L1 468 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 ZBTB45Q96K62 511 aaPredicted RBP14.82□□□□□ -0.04
COL5A1-201ENST00000371817 SENP8Q96LD8 212 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 ACBD6Q9BR61 282 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 GON7Q9BXV9 100 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 SLC6A16Q9GZN6 736 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 PCBD2Q9H0N5 130 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 LHX5Q9H2C1 402 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 CCDC85CA6NKD9 419 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 FMO6PO60774 539 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 PTPN9P43378 593 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 PARP15Q460N3 678 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 TMEM41BQ5BJD5 291 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 NIPA1Q7RTP0 329 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 FAM151AQ8WW52 585 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 ALPK1Q96QP1 1244 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 TSSK6Q9BXA6 273 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 NLKQ9UBE8 527 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 H3BRB1 525 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 CAPN5O15484 640 aaPredicted RBP14.82□□□□□ -0.04
COL5A1-201ENST00000371817 FOXD2O60548 495 aaPredicted RBP14.82□□□□□ -0.04
COL5A1-201ENST00000371817 MMP8P22894 467 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 CD34P28906 385 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 PGM5Q15124 567 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 SEC23AQ15436 765 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 TUT1Q9H6E5 874 aaKnown RBP14.82□□□□□ -0.04
COL5A1-201ENST00000371817 HECW2Q9P2P5 1572 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 MYO3AQ8NEV4 1616 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 OTOL1A6NHN0 477 aaPredicted RBP14.82□□□□□ -0.04
COL5A1-201ENST00000371817 CH25HO95992 272 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 CHRM1P11229 460 aaPredicted RBP14.82□□□□□ -0.04
COL5A1-201ENST00000371817 CELP19835 753 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 RAB30Q15771 203 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 TLDC1Q6P9B6 456 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 PLD5Q8N7P1 536 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 OR1J4Q8NGS1 313 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 MFSD3Q96ES6 412 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 MYO19Q96H55 970 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 MTERF1Q99551 399 aaKnown RBP14.82□□□□□ -0.04
COL5A1-201ENST00000371817 CTPS2Q9NRF8 586 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 ZFP57Q9NU63 452 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 FBXW2Q9UKT8 454 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 TCAF1Q9Y4C2 921 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 PTCH2Q9Y6C5 1203 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 OTOFQ9HC10 1997 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 TRAV19A0A0A6YYK7 116 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 JUNDP17535 347 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 IL4RP24394 825 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 PTP4A2Q12974 167 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 TMEM205Q6UW68 189 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 ZNF705AQ6ZN79 300 aaPredicted RBP14.82□□□□□ -0.04
COL5A1-201ENST00000371817 PMEPA1Q969W9 287 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 EIF2B3Q9NR50 452 aaKnown RBP14.82□□□□□ -0.04
COL5A1-201ENST00000371817 TBC1D3BA6NDS4 549 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 PRAMEF2O60811 474 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 MAP2K4P45985 399 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 CDK3Q00526 305 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 TUSC3Q13454 348 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 NRROSQ86YC3 692 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 CSPG4P5Q96PW8 444 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 OSER1Q9NX31 292 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 UNC13BO14795 1591 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 UBFD1O14562 309 aaKnown RBP14.82□□□□□ -0.04
COL5A1-201ENST00000371817 ZNF136P52737 540 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 SPIN4Q56A73 249 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 LDB1Q86U70 411 aaPredicted RBP14.82□□□□□ -0.04
COL5A1-201ENST00000371817 DCP2Q8IU60 420 aaKnown RBP14.82□□□□□ -0.04
COL5A1-201ENST00000371817 OR2AP1Q8NGE2 309 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 NINJ1Q92982 152 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 CENPMQ9NSP4 180 aa14.82□□□□□ -0.04
COL5A1-201ENST00000371817 TEX10Q9NXF1 929 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms