RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 TOR1BO14657 336 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 CHUKO15111 745 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 TM9SF1O15321 606 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 ZNF217O75362 1048 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 GPC4O75487 556 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 POP7O75817 140 aaKnown RBP3.45□□□□□ -1.86
MCF2-202ENST00000370573 BPGMP07738 259 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 HOXC4P09017 264 aaPredicted RBP3.45□□□□□ -1.86
MCF2-202ENST00000370573 OR56A5P0C7T3 313 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 RALBP11234 206 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 CPA3P15088 417 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 TFEBP19484 476 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 HNRNPA2B1P22626 353 aaKnown RBP3.45□□□□□ -1.86
MCF2-202ENST00000370573 ALDH3A1P30838 453 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 PRLHRP49683 370 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 GTF2A1P52655 376 aaPredicted RBP3.45□□□□□ -1.86
MCF2-202ENST00000370573 PFN3P60673 137 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 PCLAFQ15004 111 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 FAM83EQ2M2I3 478 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 BCL7AQ4VC05 210 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 TECRLQ5HYJ1 363 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 LRRC8EQ6NSJ5 796 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 KYAT3Q6YP21 454 aaKnown RBP3.45□□□□□ -1.86
MCF2-202ENST00000370573 FAM83HQ6ZRV2 1179 aaPredicted RBP3.45□□□□□ -1.86
MCF2-202ENST00000370573 PIWIL4Q7Z3Z4 852 aaKnown RBP3.45□□□□□ -1.86
MCF2-202ENST00000370573 C10orf107Q8IVU9 208 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 TRIM48Q8IWZ4 208 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 ZBTB2Q8N680 514 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 TMEM105Q8N8V8 129 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 MOCOSQ96EN8 888 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 LINGO1Q96FE5 620 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 PDLIM5Q96HC4 596 aaKnown RBP3.45□□□□□ -1.86
MCF2-202ENST00000370573 MRPL57Q9BQC6 102 aaKnown RBP3.45□□□□□ -1.86
MCF2-202ENST00000370573 NUDT16L1Q9BRJ7 211 aaKnown RBP3.45□□□□□ -1.86
MCF2-202ENST00000370573 CAPS2Q9BXY5 557 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 DERL2Q9GZP9 239 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 EPHX3Q9H6B9 360 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 ALG9Q9H6U8 611 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 WDR26Q9H7D7 661 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 SYTL2Q9HCH5 934 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.45□□□□□ -1.86
MCF2-202ENST00000370573 HS3ST3A1Q9Y663 406 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 MUC3AQ02505 3323 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 SDK1Q7Z5N4 2213 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 SLC5A10A0PJK1 596 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 NPEPPSL1A6NEC2 478 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 HMX3A6NHT5 357 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 FAM171A2A8MVW0 826 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 FPGTO14772 594 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 SCAMP1O15126 338 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 GRID2O43424 1007 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 VEGFDO43915 354 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 SLCO2B1O94956 709 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 FTH1P02794 183 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 ITGA5P08648 1049 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 FGF3P11487 239 aaPredicted RBP3.44□□□□□ -1.86
MCF2-202ENST00000370573 TAC1P20366 129 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 FPR1P21462 350 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 BGNP21810 368 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 PDHA2P29803 388 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 PBLDP30039 288 aaPredicted RBP3.44□□□□□ -1.86
MCF2-202ENST00000370573 HOXA6P31267 233 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 ARRB2P32121 409 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 MAGEA9P43362 315 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 CCR3P51677 355 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 GNGT1P63211 74 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 HSPA14Q0VDF9 509 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 SLC13A2Q13183 592 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 TSNQ15631 228 aaKnown RBP3.44□□□□□ -1.86
MCF2-202ENST00000370573 CCDC153Q494R4 210 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 PLEKHS1Q5SXH7 462 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 UGT3A1Q6NUS8 523 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 ZYG11AQ6WRX3 759 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 Q6ZSR6 202 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 OTOAQ7RTW8 1153 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 CCDC91Q7Z6B0 441 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 ABI3BPQ7Z7G0 1075 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 LCA5Q86VQ0 697 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 PROSER1Q86XN7 944 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 RASGRP3Q8IV61 690 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 SLC22A18ASQ8N1D0 253 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 DENND6BQ8NEG7 585 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 OR6Y1Q8NGX8 325 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 OR56A3Q8NH54 315 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 OR1E3Q8WZA6 343 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 ELMO1Q92556 727 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 ZNF75CPQ92670 426 aaPredicted RBP3.44□□□□□ -1.86
MCF2-202ENST00000370573 LINC00615Q96LM1 132 aaPredicted RBP3.44□□□□□ -1.86
MCF2-202ENST00000370573 ZNF317Q96PQ6 595 aaPredicted RBP3.44□□□□□ -1.86
MCF2-202ENST00000370573 PANX3Q96QZ0 392 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 ATOH8Q96SQ7 321 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 C1QTNF7Q9BXJ2 289 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 IQCGQ9H095 443 aaKnown RBP3.44□□□□□ -1.86
MCF2-202ENST00000370573 CHST8Q9H2A9 424 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 TFB2MQ9H5Q4 396 aaKnown RBP3.44□□□□□ -1.86
MCF2-202ENST00000370573 FGF22Q9HCT0 170 aa3.44□□□□□ -1.86
MCF2-202ENST00000370573 MRPL40Q9NQ50 206 aaKnown RBP3.44□□□□□ -1.86
MCF2-202ENST00000370573 PRMT8Q9NR22 394 aaPredicted RBP3.44□□□□□ -1.86
MCF2-202ENST00000370573 PHPT1Q9NRX4 125 aaPredicted RBP3.44□□□□□ -1.86
MCF2-202ENST00000370573 MRGBPQ9NV56 204 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms