RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 HOXD1Q9GZZ0 328 aa9.52□□□□□ -0.88
SCAF11-202ENST00000369367 LTBP4Q8N2S1 1624 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 ADAMTS3O15072 1205 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 CHRM1P11229 460 aaPredicted RBP9.52□□□□□ -0.89
SCAF11-202ENST00000369367 ALOX12P18054 663 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 HSD11B1P28845 292 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 IDH3AP50213 366 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 C1GALT1C1Q96EU7 318 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 LENG8Q96PV6 779 aaPredicted RBP9.52□□□□□ -0.89
SCAF11-202ENST00000369367 REEP4Q9H6H4 257 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 EHD3Q9NZN3 535 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 DNAJB9Q9UBS3 223 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 FADS3Q9Y5Q0 445 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 CASKO14936 926 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 POLR1CO15160 346 aaPredicted RBP9.52□□□□□ -0.89
SCAF11-202ENST00000369367 JUNP05412 331 aaKnown RBP9.52□□□□□ -0.89
SCAF11-202ENST00000369367 ZNF20P17024 532 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 FOLR3P41439 243 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 AP3S2P59780 193 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 CDK6Q00534 326 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 KIR2DS3Q14952 304 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 TRIM74Q86UV6 250 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 UBALD2Q8IYN6 164 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 PJA1Q8NG27 643 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 S100ZQ8WXG8 99 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 APOOQ9BUR5 198 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 LGR4Q9BXB1 951 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 PITHD1Q9GZP4 211 aaPredicted RBP9.52□□□□□ -0.89
SCAF11-202ENST00000369367 SMPD3Q9NY59 655 aaPredicted RBP9.52□□□□□ -0.89
SCAF11-202ENST00000369367 GALPQ9UBC7 116 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 MCM8Q9UJA3 840 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 BLACEA4D250 179 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 H1F0P07305 194 aaKnown RBP9.52□□□□□ -0.89
SCAF11-202ENST00000369367 ABHD18Q0P651 414 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 KIAA0895LQ68EN5 471 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 DPPA4Q7L190 304 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 FAM86B1Q8N7N1 296 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 LMO3Q8TAP4 145 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 TOE1Q96GM8 510 aaKnown RBP9.52□□□□□ -0.89
SCAF11-202ENST00000369367 DPH7Q9BTV6 452 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 DLGAP4Q9Y2H0 992 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 RPL36Q9Y3U8 105 aaKnown RBP9.52□□□□□ -0.89
SCAF11-202ENST00000369367 AQP12BA6NM10 295 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 BHMG1C9JSJ3 638 aaPredicted RBP9.52□□□□□ -0.89
SCAF11-202ENST00000369367 H3BNC9 293 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 CPNE3O75131 537 aaKnown RBP9.52□□□□□ -0.89
SCAF11-202ENST00000369367 ARCN1P48444 511 aaKnown RBP9.52□□□□□ -0.89
SCAF11-202ENST00000369367 HMGCS1Q01581 520 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 CD47Q08722 323 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 CATSPEREQ5SY80 951 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 CEACAM20Q6UY09 585 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 AMIGO2Q86SJ2 522 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 TICAM1Q8IUC6 712 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 AQP12AQ8IXF9 295 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 APCDD1Q8J025 514 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 BBS10Q8TAM1 723 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 PEBP4Q96S96 227 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 TRIM8Q9BZR9 551 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 PPP4R1LQ9P1A2 415 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 MAU2Q9Y6X3 613 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 BRINP1O60477 761 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 ZNF84P51523 738 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 SRP54P61011 504 aaKnown RBP9.52□□□□□ -0.89
SCAF11-202ENST00000369367 PLCXD2Q0VAA5 305 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 TARDBPQ13148 414 aaKnown RBP eCLIP9.52□□□□□ -0.89
SCAF11-202ENST00000369367 TXNRD3NBQ6F5E7 133 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 GPRIN1Q7Z2K8 1008 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 IPCEF1Q8WWN9 437 aaPredicted RBP9.52□□□□□ -0.89
SCAF11-202ENST00000369367 TSACCQ96A04 125 aaPredicted RBP9.52□□□□□ -0.89
SCAF11-202ENST00000369367 MGME1Q9BQP7 344 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 U3KQV3 271 aa9.52□□□□□ -0.89
SCAF11-202ENST00000369367 EDN1P05305 212 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 MATN1P21941 496 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 UQCRC2P22695 453 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 GKP32189 559 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 GBX2P52951 348 aaPredicted RBP9.51□□□□□ -0.89
SCAF11-202ENST00000369367 RCAN2Q14206 197 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 QSOX2Q6ZRP7 698 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 GALNT12Q8IXK2 581 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 FATE1Q969F0 183 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 MRGPRX2Q96LB1 330 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 HHIPQ96QV1 700 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 PHF7Q9BWX1 381 aaPredicted RBP9.51□□□□□ -0.89
SCAF11-202ENST00000369367 CHMP1AQ9HD42 196 aaPredicted RBP9.51□□□□□ -0.89
SCAF11-202ENST00000369367 SLC2A6Q9UGQ3 507 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 LINC01553A4QN01 128 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 WASH4PA8MWX3 477 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 PPM1BO75688 479 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 MT-ND5P03915 603 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 RPS9P46781 194 aaKnown RBP9.51□□□□□ -0.89
SCAF11-202ENST00000369367 XKP51811 444 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 NIPAL4Q0D2K0 466 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 CRB2Q5IJ48 1285 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 Q6ZSR6 202 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 LAPTM4BQ86VI4 370 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 OR51B5Q9H339 312 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 POLE3Q9NRF9 147 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 NLGN3Q9NZ94 848 aa9.51□□□□□ -0.89
SCAF11-202ENST00000369367 N4BP2Q86UW6 1770 aaPredicted RBP9.51□□□□□ -0.89
SCAF11-202ENST00000369367 SASH3O75995 380 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms