RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 GALNT10Q86SR1 603 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 SLC44A2Q8IWA5 706 aaPredicted RBP17.3■□□□□ 0.36
CHTOP-201ENST00000368686 OR10G2Q8NGC3 310 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 OR13C4Q8NGS5 318 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 AP3S1Q92572 193 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 MARC2Q969Z3 335 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 CREB3L1Q96BA8 519 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 C7orf34Q96L11 122 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 SPATA33Q96N06 139 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 SORCS2Q96PQ0 1159 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 ARHGAP39Q9C0H5 1083 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 UXTQ9UBK9 157 aaPredicted RBP17.3■□□□□ 0.36
CHTOP-201ENST00000368686 PLEKHB1Q9UF11 243 aaPredicted RBP17.3■□□□□ 0.36
CHTOP-201ENST00000368686 UBQLN2Q9UHD9 624 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 RIMKLBQ9ULI2 386 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 LSM2Q9Y333 95 aaKnown RBP17.3■□□□□ 0.36
CHTOP-201ENST00000368686 ZNF451Q9Y4E5 1061 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 AGRPO00253 132 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 TNFRSF11BO00300 401 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 PTX3P26022 381 aaPredicted RBP17.3■□□□□ 0.36
CHTOP-201ENST00000368686 RABGGTBP53611 331 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 CDC42P60953 191 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 RAB14P61106 215 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 UBE3AQ05086 875 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 MXD1Q05195 221 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 SLC14A1Q13336 389 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 PPIGQ13427 754 aaKnown RBP eCLIP17.3■□□□□ 0.366e-9■□□□□ 9.6
CHTOP-201ENST00000368686 SF3A2Q15428 464 aaKnown RBP17.3■□□□□ 0.36
CHTOP-201ENST00000368686 PDE12Q6L8Q7 609 aaKnown RBP17.3■□□□□ 0.36
CHTOP-201ENST00000368686 TIGD4Q8IY51 512 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 RBFAQ8N0V3 343 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 Q8N402 240 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 SLC5A8Q8N695 610 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 TOP6BLQ8N6T0 577 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 LINC01465Q8N7H1 131 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 OR7G3Q8NG95 312 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 FBXW5Q969U6 566 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 LINGO1Q96FE5 620 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 CLEC4MQ9H2X3 399 aaPredicted RBP17.3■□□□□ 0.36
CHTOP-201ENST00000368686 SCPEP1Q9HB40 452 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 WASH6PQ9NQA3 447 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 CLN6Q9NWW5 311 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 OGDHLQ9ULD0 1010 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 TMCC3Q9ULS5 477 aa17.3■□□□□ 0.36
CHTOP-201ENST00000368686 ADAMDEC1O15204 470 aa17.29■□□□□ 0.36
CHTOP-201ENST00000368686 PI15O43692 258 aa17.29■□□□□ 0.36
CHTOP-201ENST00000368686 NDUFS3O75489 264 aa17.29■□□□□ 0.36
CHTOP-201ENST00000368686 LHCGRP22888 699 aa17.29■□□□□ 0.36
CHTOP-201ENST00000368686 CDKN2CP42773 168 aa17.29■□□□□ 0.36
CHTOP-201ENST00000368686 CLCNKAP51800 687 aa17.29■□□□□ 0.36
CHTOP-201ENST00000368686 ZNF628Q5EBL2 1059 aa17.29■□□□□ 0.36
CHTOP-201ENST00000368686 MARC1Q5VT66 337 aa17.29■□□□□ 0.36
CHTOP-201ENST00000368686 BHLHA9Q7RTU4 235 aa17.29■□□□□ 0.36
CHTOP-201ENST00000368686 CTU1Q7Z7A3 348 aaKnown RBP17.29■□□□□ 0.36
CHTOP-201ENST00000368686 FAM217AQ8IXS0 508 aa17.29■□□□□ 0.36
CHTOP-201ENST00000368686 CPA6Q8N4T0 437 aa17.29■□□□□ 0.36
CHTOP-201ENST00000368686 LRRC17Q8N6Y2 441 aa17.29■□□□□ 0.36
CHTOP-201ENST00000368686 RTL3Q8N8U3 475 aaKnown RBP17.29■□□□□ 0.36
CHTOP-201ENST00000368686 PHF21AQ96BD5 680 aa17.29■□□□□ 0.36
CHTOP-201ENST00000368686 TPD52L3Q96J77 140 aa17.29■□□□□ 0.36
CHTOP-201ENST00000368686 SYNDIG1Q9H7V2 258 aa17.29■□□□□ 0.36
CHTOP-201ENST00000368686 IPPKQ9H8X2 491 aa17.29■□□□□ 0.36
CHTOP-201ENST00000368686 ZNF408Q9H9D4 720 aa17.29■□□□□ 0.36
CHTOP-201ENST00000368686 AGO3Q9H9G7 860 aaKnown RBP17.29■□□□□ 0.36
CHTOP-201ENST00000368686 ZMYM5Q9UJ78 669 aa17.29■□□□□ 0.36
CHTOP-201ENST00000368686 E9PAM4 449 aa17.28■□□□□ 0.36
CHTOP-201ENST00000368686 RFXANKO14593 260 aa17.28■□□□□ 0.36
CHTOP-201ENST00000368686 KCNK5O95279 499 aa17.28■□□□□ 0.36
CHTOP-201ENST00000368686 ODC1P11926 461 aa17.28■□□□□ 0.36
CHTOP-201ENST00000368686 ZP3P21754 424 aa17.28■□□□□ 0.36
CHTOP-201ENST00000368686 HMGB2P26583 209 aaKnown RBP17.28■□□□□ 0.36
CHTOP-201ENST00000368686 BTG1P62324 171 aa17.28■□□□□ 0.36
CHTOP-201ENST00000368686 HMGCS1Q01581 520 aa17.28■□□□□ 0.36
CHTOP-201ENST00000368686 EXOSC2Q13868 293 aaKnown RBP17.28■□□□□ 0.36
CHTOP-201ENST00000368686 SPHARQ15513 63 aa17.28■□□□□ 0.36
CHTOP-201ENST00000368686 ANKRD46Q86W74 232 aa17.28■□□□□ 0.36
CHTOP-201ENST00000368686 LURAP1LQ8IV03 231 aa17.28■□□□□ 0.36
CHTOP-201ENST00000368686 ST8SIA4Q92187 359 aa17.28■□□□□ 0.36
CHTOP-201ENST00000368686 FATE1Q969F0 183 aa17.28■□□□□ 0.36
CHTOP-201ENST00000368686 MTERF3Q96E29 417 aa17.28■□□□□ 0.36
CHTOP-201ENST00000368686 SMOQ99835 787 aa17.28■□□□□ 0.36
CHTOP-201ENST00000368686 RTP3Q9BQQ7 232 aa17.28■□□□□ 0.36
CHTOP-201ENST00000368686 PDGFCQ9NRA1 345 aa17.28■□□□□ 0.36
CHTOP-201ENST00000368686 SCML1Q9UN30 329 aa17.28■□□□□ 0.36
CHTOP-201ENST00000368686 PADI2Q9Y2J8 665 aa17.28■□□□□ 0.36
CHTOP-201ENST00000368686 ZNF175Q9Y473 711 aa17.28■□□□□ 0.36
CHTOP-201ENST00000368686 FZD6O60353 706 aa17.28■□□□□ 0.36
CHTOP-201ENST00000368686 OR1I1O60431 355 aa17.28■□□□□ 0.36
CHTOP-201ENST00000368686 PLOD3O60568 738 aa17.28■□□□□ 0.36
CHTOP-201ENST00000368686 BCKDHAP12694 445 aa17.28■□□□□ 0.36
CHTOP-201ENST00000368686 HOXB1P14653 301 aaPredicted RBP17.28■□□□□ 0.36
CHTOP-201ENST00000368686 ATF6P18850 670 aa17.28■□□□□ 0.36
CHTOP-201ENST00000368686 HK1P19367 917 aa17.28■□□□□ 0.36
CHTOP-201ENST00000368686 SDC2P34741 201 aa17.28■□□□□ 0.36
CHTOP-201ENST00000368686 HMGCS2P54868 508 aa17.28■□□□□ 0.36
CHTOP-201ENST00000368686 CLDN8P56748 225 aa17.28■□□□□ 0.36
CHTOP-201ENST00000368686 RPS14P62263 151 aaKnown RBP17.28■□□□□ 0.36
CHTOP-201ENST00000368686 PPP3R1P63098 170 aa17.28■□□□□ 0.36
CHTOP-201ENST00000368686 ZNF33BQ06732 778 aa17.28■□□□□ 0.36
CHTOP-201ENST00000368686 BTN1A1Q13410 526 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms