RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 FITM1A5D6W6 292 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 C1QTNF9BB2RNN3 333 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 H0YIV9 168 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 H3BQF6 201 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 ITM2AO43736 263 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 CLEC3AO75596 197 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 LYPLA1O75608 230 aaPredicted RBP13.23□□□□□ -0.29
TPM3-211ENST00000368531 ESRRBO95718 433 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 HSPA4LO95757 839 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 B3GALT4O96024 378 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 SERPINE1P05121 402 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 HBQ1P09105 142 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 C1QTNF9P0C862 333 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 ZNF888P0CJ79 500 aaPredicted RBP13.23□□□□□ -0.29
TPM3-211ENST00000368531 CHN1P15882 459 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 NR1D1P20393 614 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 SERPINB3P29508 390 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 ARSFP54793 590 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 FOXA1P55317 472 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 PKNOX1P55347 436 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 RPS13P62277 151 aaKnown RBP13.23□□□□□ -0.29
TPM3-211ENST00000368531 IFT88Q13099 833 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 STX3Q13277 289 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 PWP1Q13610 501 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 RCN2Q14257 317 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 SLC9A5Q14940 896 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 TGIF1Q15583 401 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 NDUFA9Q16795 377 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 MUM1Q2TAK8 710 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 SCIMPQ6UWF3 145 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 C6orf15Q6UXA7 325 aaPredicted RBP13.23□□□□□ -0.29
TPM3-211ENST00000368531 NT5CQ8TCD5 201 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 ZNF473Q8WTR7 871 aaKnown RBP13.23□□□□□ -0.29
TPM3-211ENST00000368531 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.23□□□□□ -0.29
TPM3-211ENST00000368531 MR1Q95460 341 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 REPS1Q96D71 796 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 C10orf90Q96M02 699 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 ZNF578Q96N58 590 aaPredicted RBP13.23□□□□□ -0.29
TPM3-211ENST00000368531 F2RL3Q96RI0 385 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 HBEGFQ99075 208 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 RHBGQ9H310 441 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 ELOVL6Q9H5J4 265 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 CCDC86Q9H6F5 360 aaKnown RBP13.23□□□□□ -0.29
TPM3-211ENST00000368531 AKIRIN1Q9H9L7 192 aaPredicted RBP13.23□□□□□ -0.29
TPM3-211ENST00000368531 TNFRSF12AQ9NP84 129 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 FARSBQ9NSD9 589 aaKnown RBP13.23□□□□□ -0.29
TPM3-211ENST00000368531 SRPK3Q9UPE1 567 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 TMEM184BQ9Y519 407 aaPredicted RBP13.23□□□□□ -0.29
TPM3-211ENST00000368531 MAU2Q9Y6X3 613 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 CCDC88CQ9P219 2028 aa13.23□□□□□ -0.29
TPM3-211ENST00000368531 SCN2AQ99250 2005 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 A0A0A6YYC8 382 aaPredicted RBP13.22□□□□□ -0.29
TPM3-211ENST00000368531 MAGEB17A8MXT2 336 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 STMND1H3BQB6 276 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 I3L1I5 382 aaPredicted RBP13.22□□□□□ -0.29
TPM3-211ENST00000368531 MEN1O00255 615 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 SAP18O00422 153 aaKnown RBP13.22□□□□□ -0.29
TPM3-211ENST00000368531 MANBAO00462 879 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 DSCR3O14972 297 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 RAD1O60671 282 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 DLGAP3O95886 979 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 PDYNP01213 254 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 KLK3P07288 261 aaPredicted RBP13.22□□□□□ -0.29
TPM3-211ENST00000368531 SERPINA6P08185 405 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 IL1RNP18510 177 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 HNRNPH1P31943 449 aaKnown RBP13.22□□□□□ -0.29
TPM3-211ENST00000368531 ARRB2P32121 409 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 OR1D4P47884 311 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 RAB8AP61006 207 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 ABCE1P61221 599 aaKnown RBP13.22□□□□□ -0.29
TPM3-211ENST00000368531 PHEXP78562 749 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 HYAL2Q12891 473 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 GGTA1PQ4G0N0 100 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 FRG2Q64ET8 278 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 CLEC6AQ6EIG7 209 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 LCN10Q6JVE6 187 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 RHBDD2Q6NTF9 364 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 TMEM214Q6NUQ4 689 aaKnown RBP13.22□□□□□ -0.29
TPM3-211ENST00000368531 FAM199XQ6PEV8 388 aaPredicted RBP13.22□□□□□ -0.29
TPM3-211ENST00000368531 ATG14Q6ZNE5 492 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 PRSS41Q7RTY9 318 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 CUZD1Q86UP6 607 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 OR9A4Q8NGU2 314 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 WDR20Q8TBZ3 569 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 DYDC1Q8WWB3 177 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 SELENOMQ8WWX9 145 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 FGF11Q92914 225 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 MMABQ96EY8 250 aaPredicted RBP13.22□□□□□ -0.29
TPM3-211ENST00000368531 MAGEB10Q96LZ2 347 aaPredicted RBP13.22□□□□□ -0.29
TPM3-211ENST00000368531 FRG2BQ96QU4 278 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 YIPF2Q9BWQ6 316 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 SPRY4Q9C004 299 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 B3GNT4Q9C0J1 378 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 AICDAQ9GZX7 198 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 OR51B5Q9H339 312 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 EML4Q9HC35 981 aaKnown RBP13.22□□□□□ -0.29
TPM3-211ENST00000368531 MED4Q9NPJ6 270 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 DMRT3Q9NQL9 472 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 INTS9Q9NV88 658 aaKnown RBP13.22□□□□□ -0.29
TPM3-211ENST00000368531 SNX6Q9UNH7 406 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms