RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 CDC20Q12834 499 aa14.33□□□□□ -0.12
SMPDL3A-201ENST00000368440 HYAL2Q12891 473 aa14.33□□□□□ -0.12
SMPDL3A-201ENST00000368440 GTF2H2Q13888 395 aa14.33□□□□□ -0.12
SMPDL3A-201ENST00000368440 E2F2Q14209 437 aa14.33□□□□□ -0.12
SMPDL3A-201ENST00000368440 GARNL3Q5VVW2 1013 aa14.33□□□□□ -0.12
SMPDL3A-201ENST00000368440 GTF2H2CQ6P1K8 395 aa14.33□□□□□ -0.12
SMPDL3A-201ENST00000368440 TMIGD1Q6UXZ0 262 aa14.33□□□□□ -0.12
SMPDL3A-201ENST00000368440 VN1R5Q7Z5H4 357 aa14.33□□□□□ -0.12
SMPDL3A-201ENST00000368440 LCA5Q86VQ0 697 aa14.33□□□□□ -0.12
SMPDL3A-201ENST00000368440 RIBC1Q8N443 379 aaPredicted RBP14.33□□□□□ -0.12
SMPDL3A-201ENST00000368440 TBC1D19Q8N5T2 526 aa14.33□□□□□ -0.12
SMPDL3A-201ENST00000368440 TLCD1Q96CP7 247 aa14.33□□□□□ -0.12
SMPDL3A-201ENST00000368440 PTCD3Q96EY7 689 aaKnown RBP14.33□□□□□ -0.12
SMPDL3A-201ENST00000368440 NSUN5Q96P11 429 aaKnown RBP14.33□□□□□ -0.12
SMPDL3A-201ENST00000368440 DRC3Q9H069 523 aa14.33□□□□□ -0.12
SMPDL3A-201ENST00000368440 ZNF304Q9HCX3 659 aa14.33□□□□□ -0.12
SMPDL3A-201ENST00000368440 COPG2Q9UBF2 871 aa14.33□□□□□ -0.12
SMPDL3A-201ENST00000368440 GPN3Q9UHW5 284 aaPredicted RBP14.33□□□□□ -0.12
SMPDL3A-201ENST00000368440 ZNF490Q9ULM2 529 aaPredicted RBP14.33□□□□□ -0.12
SMPDL3A-201ENST00000368440 ANGPTL3Q9Y5C1 460 aa14.33□□□□□ -0.12
SMPDL3A-201ENST00000368440 SEC16AO15027 2179 aa14.33□□□□□ -0.12
SMPDL3A-201ENST00000368440 C4orf51C9J302 202 aa14.32□□□□□ -0.12
SMPDL3A-201ENST00000368440 DLX3O60479 287 aa14.32□□□□□ -0.12
SMPDL3A-201ENST00000368440 GLRA3O75311 464 aa14.32□□□□□ -0.12
SMPDL3A-201ENST00000368440 WFS1O76024 890 aa14.32□□□□□ -0.12
SMPDL3A-201ENST00000368440 B3GALT4O96024 378 aa14.32□□□□□ -0.12
SMPDL3A-201ENST00000368440 KRT4P19013 534 aa14.32□□□□□ -0.12
SMPDL3A-201ENST00000368440 SYT16Q17RD7 645 aa14.32□□□□□ -0.12
SMPDL3A-201ENST00000368440 PRMT9Q6P2P2 845 aa14.32□□□□□ -0.12
SMPDL3A-201ENST00000368440 TRABD2AQ86V40 505 aa14.32□□□□□ -0.12
SMPDL3A-201ENST00000368440 PDSS2Q86YH6 399 aa14.32□□□□□ -0.12
SMPDL3A-201ENST00000368440 SRRM1Q8IYB3 904 aaKnown RBP14.32□□□□□ -0.12
SMPDL3A-201ENST00000368440 CNPY4Q8N129 248 aa14.32□□□□□ -0.12
SMPDL3A-201ENST00000368440 AMER3Q8N944 861 aa14.32□□□□□ -0.12
SMPDL3A-201ENST00000368440 OR9A4Q8NGU2 314 aa14.32□□□□□ -0.12
SMPDL3A-201ENST00000368440 NT5CQ8TCD5 201 aa14.32□□□□□ -0.12
SMPDL3A-201ENST00000368440 CREB3L4Q8TEY5 395 aa14.32□□□□□ -0.12
SMPDL3A-201ENST00000368440 COL26A1Q96A83 441 aa14.32□□□□□ -0.12
SMPDL3A-201ENST00000368440 MMABQ96EY8 250 aaPredicted RBP14.32□□□□□ -0.12
SMPDL3A-201ENST00000368440 STMN4Q9H169 189 aaPredicted RBP14.32□□□□□ -0.12
SMPDL3A-201ENST00000368440 DCDC2Q9UHG0 476 aa14.32□□□□□ -0.12
SMPDL3A-201ENST00000368440 ADAM21Q9UKJ8 722 aa14.32□□□□□ -0.12
SMPDL3A-201ENST00000368440 PCTPQ9UKL6 214 aa14.32□□□□□ -0.12
SMPDL3A-201ENST00000368440 TMCO1Q9UM00 188 aa14.32□□□□□ -0.12
SMPDL3A-201ENST00000368440 TNPO3Q9Y5L0 923 aaKnown RBP14.32□□□□□ -0.12
SMPDL3A-201ENST00000368440 ATMQ13315 3056 aa14.32□□□□□ -0.12
SMPDL3A-201ENST00000368440 CACNA1BQ00975 2339 aa14.32□□□□□ -0.12
SMPDL3A-201ENST00000368440 TBX6O95947 436 aaPredicted RBP14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 RPS17P08708 135 aaKnown RBP14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 CREB1P16220 341 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 FBLP22087 321 aaKnown RBP14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 CXCR2P25025 360 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 HNF4AP41235 474 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 CASP2P42575 452 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 MAT1AQ00266 395 aaKnown RBP14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 SLC18A2Q05940 514 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 PWP1Q13610 501 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 FAM53BQ14153 422 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 TBCCQ15814 346 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 NDUFA9Q16795 377 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 FAM219BQ5XKK7 198 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 SHISA6Q6ZSJ9 500 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 OVCH1Q7RTY7 1134 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 SYVN1Q86TM6 617 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 KRT78Q8N1N4 520 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 FKBP10Q96AY3 582 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 MVB12AQ96EY5 273 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 EFCAB11Q9BUY7 163 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 SLC6A16Q9GZN6 736 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 KLHL31Q9H511 634 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 NT5DC2Q9H857 520 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 IPPKQ9H8X2 491 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 ZBTB26Q9HCK0 441 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 PTRH2Q9Y3E5 179 aaKnown RBP14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 CDC14CA4D256 554 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 OR7A17O14581 309 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 PROCP04070 461 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 PCDH1Q08174 1060 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 NKG7Q16617 165 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 EXOC3L1Q86VI1 746 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 OR52B6Q8NGF0 335 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 TMEM237Q96Q45 408 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 SPSB2Q99619 263 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 C17orf62Q9BQA9 187 aa14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 RALYQ9UKM9 306 aaKnown RBP14.31□□□□□ -0.12
SMPDL3A-201ENST00000368440 NUP210LQ5VU65 1888 aa14.3□□□□□ -0.12
SMPDL3A-201ENST00000368440 ZNF860A6NHJ4 632 aa14.3□□□□□ -0.12
SMPDL3A-201ENST00000368440 SGK494L7N484 410 aa14.3□□□□□ -0.12
SMPDL3A-201ENST00000368440 COPEO14579 308 aa14.3□□□□□ -0.12
SMPDL3A-201ENST00000368440 UMODP07911 640 aa14.3□□□□□ -0.12
SMPDL3A-201ENST00000368440 ZNF888P0CJ79 500 aaPredicted RBP14.3□□□□□ -0.12
SMPDL3A-201ENST00000368440 TSPAN8P19075 237 aa14.3□□□□□ -0.12
SMPDL3A-201ENST00000368440 HNRNPH1P31943 449 aaKnown RBP14.3□□□□□ -0.12
SMPDL3A-201ENST00000368440 CRHR1P34998 444 aa14.3□□□□□ -0.12
SMPDL3A-201ENST00000368440 PPP2R2AP63151 447 aa14.3□□□□□ -0.12
SMPDL3A-201ENST00000368440 MC1RQ01726 317 aa14.3□□□□□ -0.12
SMPDL3A-201ENST00000368440 RGS1Q08116 209 aa14.3□□□□□ -0.12
SMPDL3A-201ENST00000368440 DSG2Q14126 1118 aa14.3□□□□□ -0.12
SMPDL3A-201ENST00000368440 UGT8Q16880 541 aa14.3□□□□□ -0.12
SMPDL3A-201ENST00000368440 CRTC2Q53ET0 693 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms