RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 DAZLQ92904 295 aaKnown RBP8.39□□□□□ -1.07
SYNE1-206ENST00000367253 EPYCQ99645 322 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 NAA11Q9BSU3 229 aaPredicted RBP8.39□□□□□ -1.07
SYNE1-206ENST00000367253 HDHD5Q9BXW7 423 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 CDT1Q9H211 546 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 NINJ2Q9NZG7 142 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 RAB26Q9ULW5 256 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 GABRQQ9UN88 632 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 PCDHGA2Q9Y5H1 932 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 BACE2Q9Y5Z0 518 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 OR2AT4A6NND4 320 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 PRAMEF26H0Y7S4 382 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 PPP1R2P9O14990 202 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 HRGP04196 525 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 ITGB1P05556 798 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 DLDP09622 509 aaKnown RBP8.39□□□□□ -1.07
SYNE1-206ENST00000367253 MATN1P21941 496 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 EPHA4P54764 986 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 MELKQ14680 651 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 PRRT3Q5FWE3 981 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 FBXO48Q5FWF7 155 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 NDUFAF5Q5TEU4 345 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 BTLAQ7Z6A9 289 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 CFAP206Q8IYR0 622 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 ZNF567Q8N184 647 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 CLIP4Q8N3C7 705 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 SGTBQ96EQ0 304 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 HS6ST2Q96MM7 605 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 LENG8Q96PV6 779 aaPredicted RBP8.39□□□□□ -1.07
SYNE1-206ENST00000367253 ZNF607Q96SK3 696 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 SEMA3CQ99985 751 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 RUSC1Q9BVN2 902 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 RIOX1Q9H6W3 641 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 GLOD4Q9HC38 313 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 ABCB8Q9NUT2 735 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 PAQR5Q9NXK6 330 aaPredicted RBP8.39□□□□□ -1.07
SYNE1-206ENST00000367253 USP36Q9P275 1121 aaKnown RBP8.39□□□□□ -1.07
SYNE1-206ENST00000367253 ANGPT4Q9Y264 503 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 SAMHD1Q9Y3Z3 626 aaKnown RBP8.39□□□□□ -1.07
SYNE1-206ENST00000367253 DCDC2BA2VCK2 349 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 KLRG2A4D1S0 409 aaPredicted RBP8.38□□□□□ -1.07
SYNE1-206ENST00000367253 OR6C74A6NCV1 312 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 FADS2P1A8MWK0 482 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 GZMAP12544 262 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 HOXB9P17482 250 aaPredicted RBP8.38□□□□□ -1.07
SYNE1-206ENST00000367253 CPN2P22792 545 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 AZGP1P25311 298 aaKnown RBP8.38□□□□□ -1.07
SYNE1-206ENST00000367253 DCKP27707 260 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 ICAM3P32942 547 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 STXBP5Q5T5C0 1151 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 ZCCHC23Q6ZST2 131 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 MCATQ8IVS2 390 aaKnown RBP8.38□□□□□ -1.07
SYNE1-206ENST00000367253 ZCCHC9Q8N567 271 aaKnown RBP8.38□□□□□ -1.07
SYNE1-206ENST00000367253 TXNDC5Q8NBS9 432 aaKnown RBP8.38□□□□□ -1.07
SYNE1-206ENST00000367253 OR10T2Q8NGX3 314 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 PPP1R35Q8TAP8 253 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.38□□□□□ -1.07
SYNE1-206ENST00000367253 TAS1R2Q8TE23 839 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 SELENOMQ8WWX9 145 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 KLK6Q92876 244 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 CADM1Q9BY67 442 aaKnown RBP8.38□□□□□ -1.07
SYNE1-206ENST00000367253 DUSP16Q9BY84 665 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 NANOGQ9H9S0 305 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 CXorf21Q9HAI6 301 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 MGAT4BQ9UQ53 548 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 UBIAD1Q9Y5Z9 338 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 E7ENX8 843 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 J3QR89 54 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 RHOQP17081 205 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 GRK5P34947 590 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 CDK18Q07002 472 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 IL10RAQ13651 578 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 SLC1A5Q15758 541 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 P2RY8Q86VZ1 359 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 SLITRK4Q8IW52 837 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 MUL1Q969V5 352 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 CPNE1Q99829 537 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 LACRTQ9GZZ8 138 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 SMIM28A0A1B0GU29 152 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 CDC14CA4D256 554 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 FAM86C2PA6NEL3 165 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 DPM1O60762 260 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 CTSAP10619 480 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 LAMP2P13473 410 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 C5AR1P21730 350 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 PPIBP23284 216 aaKnown RBP8.38□□□□□ -1.07
SYNE1-206ENST00000367253 HRH2P25021 359 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 HAAOP46952 286 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 DCDC1P59894 354 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 VLDLRP98155 873 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 RFTN1Q14699 578 aaPredicted RBP8.38□□□□□ -1.07
SYNE1-206ENST00000367253 XKR6Q5GH73 641 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 UBE2UQ5VVX9 321 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 KIAA1211LQ6NV74 962 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 KCNIP4Q6PIL6 250 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 SPOCD1Q6ZMY3 1216 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 SLC34A3Q8N130 599 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 OR2T3Q8NH03 318 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 PIH1D2Q8WWB5 315 aa8.38□□□□□ -1.07
SYNE1-206ENST00000367253 ARL8BQ9NVJ2 186 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms