RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 AVPR1BP47901 424 aa11.77□□□□□ -0.53
MRPL55-209ENST00000366735 TDGF1P3P51864 188 aa11.77□□□□□ -0.53
MRPL55-209ENST00000366735 ADARP55265 1226 aaKnown RBP11.77□□□□□ -0.53
MRPL55-209ENST00000366735 ARF3P61204 181 aaPredicted RBP11.77□□□□□ -0.53
MRPL55-209ENST00000366735 PRTGQ2VWP7 1150 aa11.77□□□□□ -0.53
MRPL55-209ENST00000366735 TTLL9Q3SXZ7 439 aa11.77□□□□□ -0.53
MRPL55-209ENST00000366735 SP5Q6BEB4 398 aaPredicted RBP11.77□□□□□ -0.53
MRPL55-209ENST00000366735 GDF7Q7Z4P5 450 aa11.77□□□□□ -0.53
MRPL55-209ENST00000366735 ADCK2Q7Z695 626 aa11.77□□□□□ -0.53
MRPL55-209ENST00000366735 MCEMP1Q8IX19 187 aa11.77□□□□□ -0.53
MRPL55-209ENST00000366735 OR4N4Q8N0Y3 316 aa11.77□□□□□ -0.53
MRPL55-209ENST00000366735 CNPY4Q8N129 248 aa11.77□□□□□ -0.53
MRPL55-209ENST00000366735 ZNF808Q8N4W9 903 aaPredicted RBP11.77□□□□□ -0.53
MRPL55-209ENST00000366735 MCOLN3Q8TDD5 553 aa11.77□□□□□ -0.53
MRPL55-209ENST00000366735 FBF1Q8TES7 1133 aa11.77□□□□□ -0.53
MRPL55-209ENST00000366735 TCF12Q99081 682 aa11.77□□□□□ -0.53
MRPL55-209ENST00000366735 CYTH2Q99418 400 aa11.77□□□□□ -0.53
MRPL55-209ENST00000366735 TUBB6Q9BUF5 446 aa11.77□□□□□ -0.53
MRPL55-209ENST00000366735 TREX1Q9NSU2 369 aa11.77□□□□□ -0.53
MRPL55-209ENST00000366735 SEC14L3Q9UDX4 400 aa11.77□□□□□ -0.53
MRPL55-209ENST00000366735 RUVBL2Q9Y230 463 aaKnown RBP11.77□□□□□ -0.53
MRPL55-209ENST00000366735 RUVBL1Q9Y265 456 aaKnown RBP11.77□□□□□ -0.53
MRPL55-209ENST00000366735 MAD1L1Q9Y6D9 718 aa11.77□□□□□ -0.53
MRPL55-209ENST00000366735 ABCA12Q86UK0 2595 aa11.77□□□□□ -0.53
MRPL55-209ENST00000366735 SCN3AQ9NY46 2000 aa11.76□□□□□ -0.53
MRPL55-209ENST00000366735 NCOA6Q14686 2063 aaPredicted RBP11.76□□□□□ -0.53
MRPL55-209ENST00000366735 TRGV8A0A0C4DH27 118 aa11.76□□□□□ -0.53
MRPL55-209ENST00000366735 FAM237BA0A1B0GVD1 139 aa11.76□□□□□ -0.53
MRPL55-209ENST00000366735 A0A1W2PPV9 198 aa11.76□□□□□ -0.53
MRPL55-209ENST00000366735 TLDC2A0PJX2 215 aa11.76□□□□□ -0.53
MRPL55-209ENST00000366735 OR5H15A6NDH6 313 aa11.76□□□□□ -0.53
MRPL55-209ENST00000366735 MYO1CO00159 1063 aa11.76□□□□□ -0.53
MRPL55-209ENST00000366735 MATN4O95460 622 aa11.76□□□□□ -0.53
MRPL55-209ENST00000366735 C1QAP02745 245 aa11.76□□□□□ -0.53
MRPL55-209ENST00000366735 CHRM3P20309 590 aa11.76□□□□□ -0.53
MRPL55-209ENST00000366735 OGNP20774 298 aaKnown RBP11.76□□□□□ -0.53
MRPL55-209ENST00000366735 MGAT1P26572 445 aa11.76□□□□□ -0.53
MRPL55-209ENST00000366735 GCAP28676 217 aa11.76□□□□□ -0.53
MRPL55-209ENST00000366735 FMO4P31512 558 aa11.76□□□□□ -0.53
MRPL55-209ENST00000366735 SLC26A3P40879 764 aa11.76□□□□□ -0.53
MRPL55-209ENST00000366735 KCNK10P57789 538 aa11.76□□□□□ -0.53
MRPL55-209ENST00000366735 ABATP80404 500 aa11.76□□□□□ -0.53
MRPL55-209ENST00000366735 RELAQ04206 551 aa11.76□□□□□ -0.53
MRPL55-209ENST00000366735 TYSND1Q2T9J0 566 aa11.76□□□□□ -0.53
MRPL55-209ENST00000366735 CCSMST1Q4G0I0 132 aa11.76□□□□□ -0.53
MRPL55-209ENST00000366735 OXLD1Q5BKU9 147 aa11.76□□□□□ -0.53
MRPL55-209ENST00000366735 SPANXN3Q5MJ09 141 aa11.76□□□□□ -0.53
MRPL55-209ENST00000366735 ICE2Q659A1 982 aa11.76□□□□□ -0.53
MRPL55-209ENST00000366735 ZNF324BQ6AW86 544 aaPredicted RBP11.76□□□□□ -0.53
MRPL55-209ENST00000366735 BNC2Q6ZN30 1099 aaPredicted RBP11.76□□□□□ -0.53
MRPL55-209ENST00000366735 DTWD1Q8N5C7 304 aa11.76□□□□□ -0.53
MRPL55-209ENST00000366735 EPS8L3Q8TE67 593 aaKnown RBP11.76□□□□□ -0.53
MRPL55-209ENST00000366735 THAP11Q96EK4 314 aa11.76□□□□□ -0.53
MRPL55-209ENST00000366735 KIFC1Q9BW19 673 aa11.76□□□□□ -0.53
MRPL55-209ENST00000366735 ZNF700Q9H0M5 742 aa11.76□□□□□ -0.53
MRPL55-209ENST00000366735 CCDC68Q9H2F9 335 aa11.76□□□□□ -0.53
MRPL55-209ENST00000366735 MOCS1Q9NZB8 636 aa11.76□□□□□ -0.53
MRPL55-209ENST00000366735 TAC3Q9UHF0 121 aa11.76□□□□□ -0.53
MRPL55-209ENST00000366735 TSR3Q9UJK0 312 aaKnown RBP11.76□□□□□ -0.53
MRPL55-209ENST00000366735 CACNA1CQ13936 2221 aa11.76□□□□□ -0.53
MRPL55-209ENST00000366735 LOC102723996A0A087X1L8 192 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 FAM159BA6NKW6 160 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 CCL21O00585 134 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 PRAMEF2O60811 474 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 NIPSNAP2O75323 286 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 PSIP1O75475 530 aaKnown RBP11.75□□□□□ -0.53
MRPL55-209ENST00000366735 UNC5CO95185 931 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 VAPBO95292 243 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 MED26O95402 600 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 C8orf89P0DMQ9 161 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 CA7P43166 264 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 PNLIPRP1P54315 467 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 ZNF33BQ06732 778 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 PRDX1Q06830 199 aaKnown RBP11.75□□□□□ -0.53
MRPL55-209ENST00000366735 FAM53BQ14153 422 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 FASTKQ14296 549 aaKnown RBP11.75□□□□□ -0.53
MRPL55-209ENST00000366735 GBX1Q14549 363 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 ZXDCQ2QGD7 858 aaPredicted RBP11.75□□□□□ -0.53
MRPL55-209ENST00000366735 CTSL3PQ5NE16 218 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 THEMIS2Q5TEJ8 643 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 MFSD4BQ5TF39 518 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 FAAH2Q6GMR7 532 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 SUSD1Q6UWL2 747 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 NEK10Q6ZWH5 1172 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 PAQR7Q86WK9 346 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 FAM76AQ8TAV0 307 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 PSMF1Q92530 271 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 LPGAT1Q92604 370 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 ZBTB9Q96C00 473 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 CFAP36Q96G28 342 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 MAGED4Q96JG8 741 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 UNKQ9C0B0 810 aaKnown RBP11.75□□□□□ -0.53
MRPL55-209ENST00000366735 CENPHQ9H3R5 247 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 INTS10Q9NVR2 710 aaKnown RBP11.75□□□□□ -0.53
MRPL55-209ENST00000366735 SYBUQ9NX95 663 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 PLA2G3Q9NZ20 509 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 SAMD15Q9P1V8 674 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 MKL2Q9ULH7 1088 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 SOX13Q9UN79 622 aa11.75□□□□□ -0.53
MRPL55-209ENST00000366735 GTF3C1Q12789 2109 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms