RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 LMX1BO60663 402 aa3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 KHDRBS3O75525 346 aaKnown RBP3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 PRDM1O75626 825 aa3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 GRAP2O75791 330 aa3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 EML2O95834 649 aa3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 SRD5A2P31213 254 aa3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 LINC01547P58512 204 aaPredicted RBP3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 BPIFB3P59826 476 aa3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 SLC3A1Q07837 685 aa3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 TEAD2Q15562 447 aa3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 ZNF74Q16587 644 aa3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 FAM76BQ5HYJ3 339 aa3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 C9orf50Q5SZB4 431 aa3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 OR4C11Q6IEV9 310 aa3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 KIAA1161Q6NSJ0 714 aa3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 SLC25A47Q6Q0C1 308 aa3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 DHRS11Q6UWP2 260 aa3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 CEACAM20Q6UY09 585 aa3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 SLC24A5Q71RS6 500 aa3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 FCRLAQ7L513 359 aa3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 SLC26A9Q7LBE3 791 aa3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 OR10V1Q8NGI7 309 aa3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 GGHQ92820 318 aa3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 FAM46BQ96A09 425 aa3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 LGALS12Q96DT0 336 aa3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 DDX50Q9BQ39 737 aaKnown RBP3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 ATP13A3Q9H7F0 1226 aa3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 TRIM10Q9UDY6 481 aa3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 FETUBQ9UGM5 382 aa3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 TRMT6Q9UJA5 497 aaKnown RBP3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 EXOC6BQ9Y2D4 811 aa3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 PPP2R2CQ9Y2T4 447 aa3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 TMED7Q9Y3B3 224 aa3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 SPATA31D1Q6ZQQ2 1576 aa3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 ARID2Q68CP9 1835 aa3.32□□□□□ -1.88
RNU6-28P-201ENST00000362378 DOCK7Q96N67 2140 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 NPHP3Q7Z494 1330 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 A0A087WUV0 522 aaPredicted RBP3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 TRBV2A0A0J9YWF9 115 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 PCDH7O60245 1069 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 CLN5O75503 358 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 AP2A2O94973 939 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 SEC24AO95486 1093 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 IGLV2-11P01706 119 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 ABHD2P08910 425 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 MMP10P09238 476 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 SLC2A2P11168 524 aaPredicted RBP3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 IL10P22301 178 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 CDKN1AP38936 164 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 SMSP52788 366 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 CASP9P55211 416 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 KCNJ10P78508 379 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 PHEXP78562 749 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 SGCGQ13326 291 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 TSTA3Q13630 321 aaPredicted RBP3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 PTPN14Q15678 1187 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 PSRC1Q6PGN9 363 aaPredicted RBP3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 CD164L2Q6UWJ8 174 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 SH2D5Q6ZV89 423 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 TOM1L2Q6ZVM7 507 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 TRMT1LQ7Z2T5 733 aaKnown RBP3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 C5orf24Q7Z6I8 188 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 ZC3H3Q8IXZ2 948 aaKnown RBP3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 NIPA2Q8N8Q9 360 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 GATAD1Q8WUU5 269 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 SUSD6Q92537 303 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 RFT1Q96AA3 541 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 SLCO4A1Q96BD0 722 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 NXPE2Q96DL1 559 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 UHRF2Q96PU4 802 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 CTAGE1Q96RT6 745 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 NAP1L3Q99457 506 aaPredicted RBP3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 WWTR1Q9GZV5 400 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 TMEM245Q9H330 911 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 ZNF71Q9NQZ8 489 aaPredicted RBP3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 MAN2C1Q9NTJ4 1040 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 C2orf42Q9NWW7 574 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 ODF2LQ9ULJ1 636 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 KCNK6Q9Y257 313 aa3.31□□□□□ -1.88
RNU6-28P-201ENST00000362378 STK36Q9NRP7 1315 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 C2orf92A0A1B0GVN3 265 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 SYCE3A1L190 88 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 SERINC4A6NH21 518 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 PMS2P5A8MQ11 134 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 A8MVM7 634 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 C19orf81C9J6K1 198 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 BLOC1S5-TXNDC5H3BN57 136 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 CYTIPO60759 359 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 SAP30O75446 220 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 CXCL14O95715 111 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 MT-ND2P03891 347 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 PRSS56P0CW18 603 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 GAP43P17677 238 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 CYP3A5P20815 502 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 ANOS1P23352 680 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 OR3A2P47893 321 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 CLK1P49759 484 aaKnown RBP3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 DCDC1P59894 354 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 IL1RL1Q01638 556 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 LCP2Q13094 533 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms