RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 KLHL21Q9UJP4 597 aa18.39■□□□□ 0.53
CMTM3-201ENST00000361909 B8ZZF3 427 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 ACSL4O60488 711 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 ALPPP05187 535 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 PRPS2P11908 318 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 ALDH9A1P49189 494 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 KCNQ1P51787 676 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 CLDN8P56748 225 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 RAP1GAP2Q684P5 730 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 TESCQ96BS2 214 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 KLF16Q9BXK1 252 aaPredicted RBP18.38■□□□□ 0.53
CMTM3-201ENST00000361909 CDCA4Q9BXL8 241 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 NIPAL2Q9H841 368 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 AASDHPPTQ9NRN7 309 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 ERVK13-1Q9NX77 482 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 CCDC182A6NF36 153 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 FADS2P1A8MWK0 482 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 GLUD1P00367 558 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 LRG1P02750 347 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 ESR1P03372 595 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 TACR2P21452 398 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 HLA-DMAP28067 261 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 PTPN6P29350 595 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 VLDLRP98155 873 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 ZNF235Q14590 738 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 NADSYN1Q6IA69 706 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 ZNF605Q86T29 641 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 RDH10Q8IZV5 341 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 VWA5B2Q8N398 1253 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 FAM181AQ8N9Y4 354 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 KREMEN2Q8NCW0 462 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 NUDT8Q8WV74 236 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 TRIB3Q96RU7 358 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 HBEGFQ99075 208 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 SPATA9Q9BWV2 254 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 SLC29A3Q9BZD2 475 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 IL21Q9HBE4 155 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 PRELID1Q9Y255 219 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 PCDHGB3Q9Y5G1 929 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 V9GYH0 126 aa18.38■□□□□ 0.53
CMTM3-201ENST00000361909 A0A0U1RQS6 177 aa18.37■□□□□ 0.53
CMTM3-201ENST00000361909 MYCLP1P12525 358 aaPredicted RBP18.37■□□□□ 0.53
CMTM3-201ENST00000361909 VMACQ2NL98 169 aa18.37■□□□□ 0.53
CMTM3-201ENST00000361909 CTSL3PQ5NE16 218 aa18.37■□□□□ 0.53
CMTM3-201ENST00000361909 TMPRSS11AQ6ZMR5 421 aa18.37■□□□□ 0.53
CMTM3-201ENST00000361909 STK40Q8N2I9 435 aa18.37■□□□□ 0.53
CMTM3-201ENST00000361909 POF1BQ8WVV4 589 aa18.37■□□□□ 0.53
CMTM3-201ENST00000361909 IGSF8Q969P0 613 aa18.37■□□□□ 0.53
CMTM3-201ENST00000361909 PLSCR3Q9NRY6 295 aa18.37■□□□□ 0.53
CMTM3-201ENST00000361909 CNOT2Q9NZN8 540 aaKnown RBP18.37■□□□□ 0.53
CMTM3-201ENST00000361909 MTCL1Q9Y4B5 1905 aaKnown RBP18.37■□□□□ 0.53
CMTM3-201ENST00000361909 EFCAB10A6NFE3 127 aa18.37■□□□□ 0.53
CMTM3-201ENST00000361909 C2orf81A6NN90 581 aa18.37■□□□□ 0.53
CMTM3-201ENST00000361909 A8MVJ9 347 aa18.37■□□□□ 0.53
CMTM3-201ENST00000361909 E5RI56 91 aa18.37■□□□□ 0.53
CMTM3-201ENST00000361909 F5H5T6 163 aa18.37■□□□□ 0.53
CMTM3-201ENST00000361909 hCG_2039718K7EN88 272 aa18.37■□□□□ 0.53
CMTM3-201ENST00000361909 AP3D1O14617 1153 aa18.37■□□□□ 0.53
CMTM3-201ENST00000361909 SEC14L5O43304 696 aa18.37■□□□□ 0.53
CMTM3-201ENST00000361909 NIPSNAP2O75323 286 aa18.37■□□□□ 0.53
CMTM3-201ENST00000361909 ULK1O75385 1050 aa18.37■□□□□ 0.53
CMTM3-201ENST00000361909 STC2O76061 302 aa18.37■□□□□ 0.53
CMTM3-201ENST00000361909 OLFM2O95897 454 aa18.37■□□□□ 0.53
CMTM3-201ENST00000361909 ITGB6P18564 788 aa18.37■□□□□ 0.53
CMTM3-201ENST00000361909 KDELR2P33947 212 aa18.37■□□□□ 0.53
CMTM3-201ENST00000361909 OR3A3P47888 321 aa18.37■□□□□ 0.53
CMTM3-201ENST00000361909 MAPKAPK2P49137 400 aa18.37■□□□□ 0.53
CMTM3-201ENST00000361909 YBEYP58557 167 aaPredicted RBP18.37■□□□□ 0.53
CMTM3-201ENST00000361909 RPS14P62263 151 aaKnown RBP18.37■□□□□ 0.53
CMTM3-201ENST00000361909 KRTCAP2Q8N6L1 136 aa18.37■□□□□ 0.53
CMTM3-201ENST00000361909 RPRD1AQ96P16 312 aaPredicted RBP18.37■□□□□ 0.53
CMTM3-201ENST00000361909 NEDD4LQ96PU5 975 aa18.37■□□□□ 0.53
CMTM3-201ENST00000361909 ZNF334Q9HCZ1 680 aaPredicted RBP18.37■□□□□ 0.53
CMTM3-201ENST00000361909 SLC6A13Q9NSD5 602 aa18.37■□□□□ 0.53
CMTM3-201ENST00000361909 C2orf78A6NCI8 922 aa18.36■□□□□ 0.53
CMTM3-201ENST00000361909 ZSCAN5BA6NJL1 495 aa18.36■□□□□ 0.53
CMTM3-201ENST00000361909 LATS1O95835 1130 aa18.36■□□□□ 0.53
CMTM3-201ENST00000361909 PTHP01270 115 aa18.36■□□□□ 0.53
CMTM3-201ENST00000361909 DNTTP04053 509 aa18.36■□□□□ 0.53
CMTM3-201ENST00000361909 C8AP07357 584 aa18.36■□□□□ 0.53
CMTM3-201ENST00000361909 MAPK1P28482 360 aa18.36■□□□□ 0.53
CMTM3-201ENST00000361909 HTR2BP41595 481 aa18.36■□□□□ 0.53
CMTM3-201ENST00000361909 IL12RB1P42701 662 aa18.36■□□□□ 0.53
CMTM3-201ENST00000361909 AP2S1P53680 142 aaPredicted RBP18.36■□□□□ 0.53
CMTM3-201ENST00000361909 VEZF1Q14119 521 aa18.36■□□□□ 0.53
CMTM3-201ENST00000361909 ALFQ53S48 1182 aa18.36■□□□□ 0.53
CMTM3-201ENST00000361909 LRRC66Q68CR7 880 aa18.36■□□□□ 0.53
CMTM3-201ENST00000361909 SUSD1Q6UWL2 747 aa18.36■□□□□ 0.53
CMTM3-201ENST00000361909 IDO2Q6ZQW0 420 aa18.36■□□□□ 0.53
CMTM3-201ENST00000361909 EFHBQ8N7U6 833 aa18.36■□□□□ 0.53
CMTM3-201ENST00000361909 UBTD2Q8WUN7 234 aa18.36■□□□□ 0.53
CMTM3-201ENST00000361909 NELL1Q92832 810 aa18.36■□□□□ 0.53
CMTM3-201ENST00000361909 UBE2FQ969M7 185 aa18.36■□□□□ 0.53
CMTM3-201ENST00000361909 HSH2DQ96JZ2 352 aa18.36■□□□□ 0.53
CMTM3-201ENST00000361909 SRRQ9GZT4 340 aa18.36■□□□□ 0.53
CMTM3-201ENST00000361909 ATP13A2Q9NQ11 1180 aa18.36■□□□□ 0.53
CMTM3-201ENST00000361909 POFUT2Q9Y2G5 429 aa18.36■□□□□ 0.53
CMTM3-201ENST00000361909 BOLA1Q9Y3E2 137 aa18.36■□□□□ 0.53
CMTM3-201ENST00000361909 ARIH1Q9Y4X5 557 aaPredicted RBP18.36■□□□□ 0.53
CMTM3-201ENST00000361909 OBSL1O75147 1896 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms