RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 ADNP2Q6IQ32 1131 aa13.03□□□□□ -0.32
LDB3-202ENST00000361373 SMARCD3Q6STE5 483 aa13.03□□□□□ -0.32
LDB3-202ENST00000361373 SLC36A4Q6YBV0 504 aa13.03□□□□□ -0.32
LDB3-202ENST00000361373 OR52E4Q8NGH9 312 aa13.03□□□□□ -0.32
LDB3-202ENST00000361373 OR5AK3PQ8NH89 298 aa13.03□□□□□ -0.32
LDB3-202ENST00000361373 YIPF4Q9BSR8 244 aa13.03□□□□□ -0.32
LDB3-202ENST00000361373 TRIM8Q9BZR9 551 aa13.03□□□□□ -0.32
LDB3-202ENST00000361373 PCDHAC1Q9H158 963 aa13.03□□□□□ -0.32
LDB3-202ENST00000361373 ALKBH4Q9NXW9 302 aa13.03□□□□□ -0.32
LDB3-202ENST00000361373 PEX16Q9Y5Y5 336 aa13.03□□□□□ -0.32
LDB3-202ENST00000361373 ADAMTS4O75173 837 aa13.02□□□□□ -0.32
LDB3-202ENST00000361373 FGF3P11487 239 aaPredicted RBP13.02□□□□□ -0.32
LDB3-202ENST00000361373 GP1BBP13224 206 aa13.02□□□□□ -0.32
LDB3-202ENST00000361373 RPS3P23396 243 aaKnown RBP eCLIP13.02□□□□□ -0.32
LDB3-202ENST00000361373 CD70P32970 193 aa13.02□□□□□ -0.32
LDB3-202ENST00000361373 RHDQ02161 417 aa13.02□□□□□ -0.32
LDB3-202ENST00000361373 CREB5Q02930 508 aa13.02□□□□□ -0.32
LDB3-202ENST00000361373 MERTKQ12866 999 aa13.02□□□□□ -0.32
LDB3-202ENST00000361373 FAM26DQ5JW98 314 aa13.02□□□□□ -0.32
LDB3-202ENST00000361373 RBM48Q5RL73 367 aaKnown RBP13.02□□□□□ -0.32
LDB3-202ENST00000361373 GPR153Q6NV75 609 aa13.02□□□□□ -0.32
LDB3-202ENST00000361373 TMEM125Q96AQ2 219 aa13.02□□□□□ -0.32
LDB3-202ENST00000361373 C17orf62Q9BQA9 187 aa13.02□□□□□ -0.32
LDB3-202ENST00000361373 KLRF1Q9NZS2 232 aa13.02□□□□□ -0.32
LDB3-202ENST00000361373 NFS1Q9Y697 457 aa13.02□□□□□ -0.32
LDB3-202ENST00000361373 A0A1W2PQ72 361 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 DRGXA6NNA5 263 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 A8MU76 341 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 TPST2O60704 377 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 CREG1O75629 220 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 ARHGEF15O94989 841 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 PLGP00747 810 aaPredicted RBP13.02□□□□□ -0.33
LDB3-202ENST00000361373 LINGO3P0C6S8 592 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 MATN1P21941 496 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 GBX2P52951 348 aaPredicted RBP13.02□□□□□ -0.33
LDB3-202ENST00000361373 SLC7A9P82251 487 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 IQCHQ86VS3 1027 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 AMIGO1Q86WK6 493 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 OR8J3Q8NGG0 315 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 BBS10Q8TAM1 723 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 ZNF483Q8TF39 744 aaPredicted RBP13.02□□□□□ -0.33
LDB3-202ENST00000361373 CANT1Q8WVQ1 401 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 ZSWIM3Q96MP5 696 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 PRTFDC1Q9NRG1 225 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 GJD2Q9UKL4 321 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 AHSA1O95433 338 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 SEMA4FO95754 770 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 ALDOAP04075 364 aaKnown RBP13.02□□□□□ -0.33
LDB3-202ENST00000361373 ITGB1P05556 798 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 DRD2P14416 443 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 TIA1P31483 386 aaKnown RBP eCLIP13.02□□□□□ -0.33
LDB3-202ENST00000361373 BMP8BP34820 402 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 WNT7BP56706 349 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 FAM189A2Q15884 450 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 ATG9BQ674R7 924 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 CXorf57Q6NSI4 855 aaKnown RBP13.02□□□□□ -0.33
LDB3-202ENST00000361373 METTL2BQ6P1Q9 378 aaKnown RBP13.02□□□□□ -0.33
LDB3-202ENST00000361373 BMP8AQ7Z5Y6 402 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 SIX5Q8N196 739 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 NPWQ8N729 165 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 PDCD10Q9BUL8 212 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 DSN1Q9H410 356 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 MTHFD1P11586 935 aaKnown RBP13.02□□□□□ -0.33
LDB3-202ENST00000361373 CBX5P45973 191 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 PLGLB1Q02325 96 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 MVKQ03426 396 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 ZNF550Q7Z398 422 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 SMPDL3BQ92485 455 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 FAM3CQ92520 227 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 ZUFSPQ96AP4 578 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 G6PC3Q9BUM1 346 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 MCUBQ9NWR8 336 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 MYH13Q9UKX3 1938 aa13.02□□□□□ -0.33
LDB3-202ENST00000361373 C1orf226A1L170 272 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 E7ENX8 843 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 EI24O14681 340 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 TP53I11O14683 189 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 SLC35E2BP0CK96 405 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 RNH1P13489 461 aaKnown RBP13.01□□□□□ -0.33
LDB3-202ENST00000361373 LIN52Q52LA3 116 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 ALKBH2Q6NS38 261 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 PLD6Q8N2A8 252 aaKnown RBP13.01□□□□□ -0.33
LDB3-202ENST00000361373 Q8N9G6 341 aaPredicted RBP13.01□□□□□ -0.33
LDB3-202ENST00000361373 KLF16Q9BXK1 252 aaPredicted RBP13.01□□□□□ -0.33
LDB3-202ENST00000361373 TPK1Q9H3S4 243 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 PIGUQ9H490 435 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 TIMMDC1Q9NPL8 285 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 AK1P00568 194 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 SYPP08247 313 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 GNALP38405 381 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 EIF2B2P49770 351 aaKnown RBP13.01□□□□□ -0.33
LDB3-202ENST00000361373 SEPHS1P49903 392 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 GMFBP60983 142 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 MAPK14Q16539 360 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 PSAPL1Q6NUJ1 521 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 ASPNQ9BXN1 380 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 CXorf21Q9HAI6 301 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 GPN1Q9HCN4 374 aaPredicted RBP13.01□□□□□ -0.33
LDB3-202ENST00000361373 ING4Q9UNL4 249 aa13.01□□□□□ -0.33
LDB3-202ENST00000361373 A0A096LPI6 279 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms