RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 CRTC1Q6UUV9 634 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 SLC30A8Q8IWU4 369 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 ZNF597Q96LX8 424 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 C1QTNF1Q9BXJ1 281 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 SPHK2Q9NRA0 654 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 GMPR2Q9P2T1 348 aaKnown RBP15.79■□□□□ 0.12
SCAF1-201ENST00000360565 ERVK-18Q9QC07 812 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 NME7Q9Y5B8 376 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 TCRBV3S1A0A5B6 114 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 HHLA1C9JL84 531 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 MUSKO15146 869 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 ACOX3O15254 700 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 IGFBP4P22692 258 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 CSTF2P33240 577 aaKnown RBP eCLIP15.79■□□□□ 0.12
SCAF1-201ENST00000360565 ACTR1BP42025 376 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 SPINT3P49223 89 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 ACTR1AP61163 376 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 FAM220AQ7Z4H9 259 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 CLECL1Q8IZS7 167 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 C11orf84Q9BUA3 381 aaPredicted RBP15.79■□□□□ 0.12
SCAF1-201ENST00000360565 SRMSQ9H3Y6 488 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 MALT1Q9UDY8 824 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 KCNK6Q9Y257 313 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 HSD17B2P37059 387 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 CCT3P49368 545 aaKnown RBP15.79■□□□□ 0.12
SCAF1-201ENST00000360565 PMS2P3Q13401 168 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 KCNC3Q14003 757 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 RNASE12Q5GAN4 147 aaKnown RBP15.79■□□□□ 0.12
SCAF1-201ENST00000360565 STRCQ7RTU9 1775 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 LILRA2Q8N149 483 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 KLHL6Q8WZ60 621 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 HERVK_113Q902F9 699 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 RHBDF1Q96CC6 855 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 C11orf24Q96F05 449 aaPredicted RBP15.79■□□□□ 0.12
SCAF1-201ENST00000360565 SLC30A3Q99726 388 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 COMMD3Q9UBI1 195 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 PCDHB14Q9Y5E9 798 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 CHURC1-FNTBB4DL54 471 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 TMEM189-UBE2V1I3L0A0 370 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 CCL5P13501 91 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 RAB8AP61006 207 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 TSTQ16762 297 aaKnown RBP15.78■□□□□ 0.12
SCAF1-201ENST00000360565 ZNF805Q5CZA5 627 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 TPRG1LQ5T0D9 272 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.78■□□□□ 0.12
SCAF1-201ENST00000360565 RTL4Q6ZR62 310 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 POMGNT2Q8NAT1 580 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 CARS2Q9HA77 564 aaKnown RBP15.78■□□□□ 0.12
SCAF1-201ENST00000360565 NKIRAS2Q9NYR9 191 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 SLAMF8Q9P0V8 285 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 ZNF221Q9UK13 617 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 RNF6Q9Y252 685 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 MAN2B2Q9Y2E5 1009 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 ST14Q9Y5Y6 855 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 NHSQ6T4R5 1651 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 H7BY64 318 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 HPRP00739 348 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 MT-ND2P03891 347 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 ADAM17P78536 824 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 ZNF155Q12901 538 aaPredicted RBP15.78■□□□□ 0.12
SCAF1-201ENST00000360565 RAPSNQ13702 412 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 ZNF404Q494X3 552 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 TAS1R1Q7RTX1 841 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 IQCHQ86VS3 1027 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 TMEM25Q86YD3 366 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 CELF5Q8N6W0 485 aaKnown RBP15.78■□□□□ 0.12
SCAF1-201ENST00000360565 FAM210AQ96ND0 272 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 PRAP1Q96NZ9 151 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 UCK2Q9BZX2 261 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 SLC28A3Q9HAS3 691 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 TMEM30AQ9NV96 361 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 UTS2RQ9UKP6 389 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 FABP12A6NFH5 140 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 ADAM12O43184 909 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 ZNF8P17098 575 aaPredicted RBP15.78■□□□□ 0.12
SCAF1-201ENST00000360565 DDX6P26196 483 aaKnown RBP eCLIP15.78■□□□□ 0.12
SCAF1-201ENST00000360565 TIA1P31483 386 aaKnown RBP eCLIP15.78■□□□□ 0.12
SCAF1-201ENST00000360565 LASP1Q14847 261 aaKnown RBP15.78■□□□□ 0.12
SCAF1-201ENST00000360565 KLHL22Q53GT1 634 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 CCDC157Q569K6 752 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 KIAA1161Q6NSJ0 714 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 REEP3Q6NUK4 255 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 DCUN1D3Q8IWE4 304 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 LRRC17Q8N6Y2 441 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 CHST14Q8NCH0 376 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 PIK3R3Q92569 461 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 TAS2R9Q9NYW1 312 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 UBAP1Q9NZ09 502 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 CDK5RAP2Q96SN8 1893 aa15.78■□□□□ 0.12
SCAF1-201ENST00000360565 NPIPB15A6NHN6 443 aaPredicted RBP15.77■□□□□ 0.12
SCAF1-201ENST00000360565 GLOD5A6NK44 160 aa15.77■□□□□ 0.12
SCAF1-201ENST00000360565 TLX2O43763 284 aaPredicted RBP15.77■□□□□ 0.12
SCAF1-201ENST00000360565 ALPPP05187 535 aa15.77■□□□□ 0.12
SCAF1-201ENST00000360565 MPC1LP0DKB6 136 aa15.77■□□□□ 0.12
SCAF1-201ENST00000360565 ITPKBP27987 946 aa15.77■□□□□ 0.12
SCAF1-201ENST00000360565 COMMD2Q86X83 199 aa15.77■□□□□ 0.12
SCAF1-201ENST00000360565 HS3ST5Q8IZT8 346 aa15.77■□□□□ 0.12
SCAF1-201ENST00000360565 CENPSQ8N2Z9 138 aa15.77■□□□□ 0.12
SCAF1-201ENST00000360565 BPIFB1Q8TDL5 484 aa15.77■□□□□ 0.12
SCAF1-201ENST00000360565 FRS2Q8WU20 508 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms