RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 SCIMPQ6UWF3 145 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 PHLDB2Q86SQ0 1253 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 DEPDC4Q8N2C3 294 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 RAB42Q8N4Z0 105 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 MORN4Q8NDC4 146 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 ABHD11Q8NFV4 315 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 NEIL3Q8TAT5 605 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 PAQR8Q8TEZ7 354 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 SMPDL3AQ92484 453 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 CDKN2AIPNLQ96HQ2 116 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 Q96MF0 132 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 LPAR4Q99677 370 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 WDR83Q9BRX9 315 aaKnown RBP5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 ADAM19Q9H013 955 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 PCBD2Q9H0N5 130 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 PRDM9Q9NQV7 894 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 SPRR3Q9UBC9 169 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 TRIM10Q9UDY6 481 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 ARL5AQ9Y689 179 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 DOCK7Q96N67 2140 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 PSTPIP1O43586 416 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 AKT1P31749 480 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 GMPRP36959 345 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 UBE2HP62256 183 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 LOXL1Q08397 574 aaPredicted RBP5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 KEAP1Q14145 624 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 TYSND1Q2T9J0 566 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 SFT2D3Q587I9 215 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 TBCELQ5QJ74 424 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 PAPD4Q6PIY7 484 aaKnown RBP5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 MTERF4Q7Z6M4 381 aaKnown RBP5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 NKAPQ8N5F7 415 aaKnown RBP5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 MFSD9Q8NBP5 474 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 B3GNT7Q8NFL0 401 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 OR51Q1Q8NH59 317 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 NUBPLQ8TB37 319 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 TMEM125Q96AQ2 219 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 SPATA13Q96N96 652 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 AMBRA1Q9C0C7 1298 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 BPIFA1Q9NP55 256 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 ZNHIT6Q9NWK9 470 aaKnown RBP5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 PSD3Q9NYI0 1048 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 ASF1AQ9Y294 204 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 ATG4BQ9Y4P1 393 aa5.54□□□□□ -1.52
CDC42SE2-201ENST00000360515 MEGF8Q7Z7M0 2845 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 PINLYPA6NC86 204 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 ERI2A8K979 691 aaKnown RBP5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 CES2O00748 559 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 P2RX6O15547 441 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 CDH16O75309 829 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 ZFAND5O76080 213 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 CNOT4O95628 575 aaKnown RBP5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 SPTBP11277 2137 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 ALAS2P22557 587 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 CHMP24386 653 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 PPM1FP49593 454 aaPredicted RBP5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 ARFIP1P53367 373 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 TERF1P54274 439 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 VLDLRP98155 873 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 TFDP2Q14188 446 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 E2F2Q14209 437 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 SLC10A1Q14973 349 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 PIGGQ5H8A4 983 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 CEP128Q6ZU80 1094 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 CCDC71Q8IV32 467 aaPredicted RBP5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 PIANPQ8IYJ0 282 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 KATNAL2Q8IYT4 538 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 TAB3Q8N5C8 712 aaPredicted RBP5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 ZNF611Q8N823 705 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 RAPGEF5Q92565 580 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 VMP1Q96GC9 406 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 PITHD1Q9GZP4 211 aaPredicted RBP5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 CDCP1Q9H5V8 836 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 HAUS4Q9H6D7 363 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 ISM1B1AKI9 464 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 KCNK1O00180 336 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 SMAPO00193 183 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 GPR39O43194 453 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 HERC3Q15034 1050 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 NOMO1Q15155 1222 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 BTBD16Q32M84 506 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 P3H1Q32P28 736 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 WLSQ5T9L3 541 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 ICE2Q659A1 982 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 E4F1Q66K89 784 aaPredicted RBP5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 GK5Q6ZS86 529 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 SH2D5Q6ZV89 423 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 BBS12Q6ZW61 710 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 PDSS2Q86YH6 399 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 CNPY4Q8N129 248 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 TMEM251Q8N6I4 163 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 KCTD6Q8NC69 237 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 NAXEQ8NCW5 288 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 PSD4Q8NDX1 1056 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 SGMS2Q8NHU3 365 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 CPLX3Q8WVH0 158 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 ACBD3Q9H3P7 528 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 CNIH4Q9P003 139 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 TRPC4Q9UBN4 977 aa5.53□□□□□ -1.52
CDC42SE2-201ENST00000360515 CRLS1Q9UJA2 301 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms