RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 NEIL2Q969S2 332 aa8.97□□□□□ -0.97
GTF3C2-202ENST00000359541 TRIM43Q96BQ3 446 aaPredicted RBP8.97□□□□□ -0.97
GTF3C2-202ENST00000359541 PHF12Q96QT6 1004 aa8.97□□□□□ -0.97
GTF3C2-202ENST00000359541 DPEP2Q9H4A9 486 aa8.97□□□□□ -0.97
GTF3C2-202ENST00000359541 SLC27A6Q9Y2P4 619 aa8.97□□□□□ -0.97
GTF3C2-202ENST00000359541 TMEM202A6NGA9 273 aa8.96□□□□□ -0.97
GTF3C2-202ENST00000359541 GABRR3A8MPY1 467 aa8.96□□□□□ -0.97
GTF3C2-202ENST00000359541 NDUFS2O75306 463 aa8.96□□□□□ -0.97
GTF3C2-202ENST00000359541 JRKO75564 520 aa8.96□□□□□ -0.97
GTF3C2-202ENST00000359541 CYP4B1P13584 511 aa8.96□□□□□ -0.97
GTF3C2-202ENST00000359541 PTPN6P29350 595 aa8.96□□□□□ -0.97
GTF3C2-202ENST00000359541 FCHO2Q0JRZ9 810 aa8.96□□□□□ -0.97
GTF3C2-202ENST00000359541 NFATC3Q12968 1075 aa8.96□□□□□ -0.97
GTF3C2-202ENST00000359541 ELOAQ14241 798 aaKnown RBP8.96□□□□□ -0.97
GTF3C2-202ENST00000359541 RGNQ15493 299 aa8.96□□□□□ -0.97
GTF3C2-202ENST00000359541 MOGQ16653 247 aa8.96□□□□□ -0.97
GTF3C2-202ENST00000359541 FAM46CQ5VWP2 391 aa8.96□□□□□ -0.97
GTF3C2-202ENST00000359541 ANKRD26P1Q6NSI1 321 aa8.96□□□□□ -0.97
GTF3C2-202ENST00000359541 OR10Q1Q8NGQ4 319 aa8.96□□□□□ -0.97
GTF3C2-202ENST00000359541 ZNF480Q8WV37 535 aa8.96□□□□□ -0.97
GTF3C2-202ENST00000359541 ZNF566Q969W8 418 aa8.96□□□□□ -0.97
GTF3C2-202ENST00000359541 DOHHQ9BU89 302 aa8.96□□□□□ -0.97
GTF3C2-202ENST00000359541 NLNQ9BYT8 704 aa8.96□□□□□ -0.97
GTF3C2-202ENST00000359541 GPN2Q9H9Y4 310 aaPredicted RBP8.96□□□□□ -0.97
GTF3C2-202ENST00000359541 MBD1Q9UIS9 605 aaPredicted RBP8.96□□□□□ -0.97
GTF3C2-202ENST00000359541 GPR34Q9UPC5 381 aa8.96□□□□□ -0.97
GTF3C2-202ENST00000359541 PIPSLA2A3N6 862 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 SYNDIG1LA6NDD5 238 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 ANKDD1BA6NHY2 528 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 RGS10O43665 173 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 ATE1O95260 518 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 CTSLP07711 333 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 PIGAP37287 484 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 FPGSQ05932 587 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 PRAMEF14Q5SWL7 426 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 PRAMEF13Q5VWM6 474 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 TMEM215Q68D42 235 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 GALNT18Q6P9A2 607 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 IKBIPQ70UQ0 350 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 PIWIL3Q7Z3Z3 882 aaKnown RBP8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 TSPYL5Q86VY4 417 aaPredicted RBP8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 ZC3H7AQ8IWR0 971 aaKnown RBP8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 RNF175Q8N4F7 328 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 SMG7Q92540 1137 aaKnown RBP8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 PPP1R14BQ96C90 147 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 VWCEQ96DN2 955 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 EPYCQ99645 322 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 ARPC5LQ9BPX5 153 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 PCBD2Q9H0N5 130 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 PALMDQ9NP74 551 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 ATP6V1HQ9UI12 483 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 B4GAT1O43505 415 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 POP7O75817 140 aaKnown RBP8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 CD22P20273 847 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 SERPINB1P30740 379 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 MNX1P50219 401 aaPredicted RBP8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 GALK1P51570 392 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 ISL1P61371 349 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 NTHL1P78549 312 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 CDK5R2Q13319 367 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 ZNF630Q2M218 657 aaPredicted RBP8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 HNRNPA1L2Q32P51 320 aaKnown RBP8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 ZNF697Q5TEC3 545 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 NXPE4Q6UWF7 544 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 CCDC81Q6ZN84 652 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 C17orf64Q86WR6 236 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 RASGRP3Q8IV61 690 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 SIX5Q8N196 739 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 DEPDC4Q8N2C3 294 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 GIPC3Q8TF64 312 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 MYLIPQ8WY64 445 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 RAB7BQ96AH8 199 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 COQ8BQ96D53 544 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 HHIPQ96QV1 700 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 SLC35A5Q9BS91 424 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 LHPPQ9H008 270 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 MTG2Q9H4K7 406 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 DMRT3Q9NQL9 472 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 UTS2RQ9UKP6 389 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 ABCG2Q9UNQ0 655 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 GMEB1Q9Y692 573 aa8.96□□□□□ -0.98
GTF3C2-202ENST00000359541 SCN8AQ9UQD0 1980 aa8.95□□□□□ -0.98
GTF3C2-202ENST00000359541 ATRXP46100 2492 aa8.95□□□□□ -0.98
GTF3C2-202ENST00000359541 KRT87PA6NCN2 255 aa8.95□□□□□ -0.98
GTF3C2-202ENST00000359541 TNFRSF11BO00300 401 aa8.95□□□□□ -0.98
GTF3C2-202ENST00000359541 DPM1O60762 260 aa8.95□□□□□ -0.98
GTF3C2-202ENST00000359541 PRAMEF4O60810 478 aa8.95□□□□□ -0.98
GTF3C2-202ENST00000359541 MOSPD3O75425 235 aa8.95□□□□□ -0.98
GTF3C2-202ENST00000359541 C6P13671 934 aa8.95□□□□□ -0.98
GTF3C2-202ENST00000359541 ANXA8P13928 327 aa8.95□□□□□ -0.98
GTF3C2-202ENST00000359541 CEBPBP17676 345 aa8.95□□□□□ -0.98
GTF3C2-202ENST00000359541 IDSP22304 550 aa8.95□□□□□ -0.98
GTF3C2-202ENST00000359541 PDHA2P29803 388 aa8.95□□□□□ -0.98
GTF3C2-202ENST00000359541 MAPK10P53779 464 aa8.95□□□□□ -0.98
GTF3C2-202ENST00000359541 WNT3P56703 355 aa8.95□□□□□ -0.98
GTF3C2-202ENST00000359541 CNTN1Q12860 1018 aa8.95□□□□□ -0.98
GTF3C2-202ENST00000359541 RPA4Q13156 261 aa8.95□□□□□ -0.98
GTF3C2-202ENST00000359541 RAPSNQ13702 412 aa8.95□□□□□ -0.98
GTF3C2-202ENST00000359541 TCEA2Q15560 299 aa8.95□□□□□ -0.98
GTF3C2-202ENST00000359541 ZXDCQ2QGD7 858 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms