RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 CPNE8Q86YQ8 564 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 TEX19Q8NA77 164 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 ZNF436Q9C0F3 470 aaPredicted RBP8.51□□□□□ -1.05
COL6A6-201ENST00000358511 TRBC2A0A5B9 178 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 PCDH7O60245 1069 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 SIX3O95343 332 aaPredicted RBP8.51□□□□□ -1.05
COL6A6-201ENST00000358511 TGM6O95932 706 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 GRM5P41594 1212 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 PIGFQ07326 219 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 TMEM69Q5SWH9 247 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 ARSKQ6UWY0 536 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 CEP97Q8IW35 865 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 ZFPM1Q8IX07 1006 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 CXorf40AQ8TE69 158 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 POTEKPQ9BYX7 375 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 DERL2Q9GZP9 239 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 SLC27A6Q9Y2P4 619 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 FKBP1AP62942 108 aaKnown RBP8.51□□□□□ -1.05
COL6A6-201ENST00000358511 KCNJ8Q15842 424 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 ATAT1Q5SQI0 421 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 FKBP1CQ5VVH2 108 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 BEND7Q8N7W2 519 aaPredicted RBP8.51□□□□□ -1.05
COL6A6-201ENST00000358511 TFAP2CQ92754 450 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 MGLLQ99685 303 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 ATG10Q9H0Y0 220 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 SOX17Q9H6I2 414 aaPredicted RBP8.51□□□□□ -1.05
COL6A6-201ENST00000358511 ARL5AQ9Y689 179 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 CCDC163A0A0D9SF12 145 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 TNFRSF10AO00220 468 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 CAPN5O15484 640 aaPredicted RBP8.51□□□□□ -1.05
COL6A6-201ENST00000358511 PRKACGP22612 351 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 EDNRAP25101 427 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 S100PP25815 95 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 YBEYP58557 167 aaPredicted RBP8.51□□□□□ -1.05
COL6A6-201ENST00000358511 KCNC4Q03721 635 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 ZNF772Q68DY9 489 aaPredicted RBP8.51□□□□□ -1.05
COL6A6-201ENST00000358511 BEST3Q8N1M1 668 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 ZNF676Q8N7Q3 588 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 IL31RAQ8NI17 732 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 ZNF597Q96LX8 424 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 PDGFDQ9GZP0 370 aaPredicted RBP8.51□□□□□ -1.05
COL6A6-201ENST00000358511 NANSQ9NR45 359 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 COQ3Q9NZJ6 369 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 FBXW11Q9UKB1 542 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 HES2Q9Y543 173 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 CNTNAP1P78357 1384 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 PSMD9O00233 223 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 RGS9O75916 674 aaPredicted RBP8.5□□□□□ -1.05
COL6A6-201ENST00000358511 SCGB1D2O95969 90 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 HSD17B1P14061 328 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 ZSWIM9Q86XI8 627 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 ACBD4Q8NC06 268 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 CHDHQ8NE62 594 aaPredicted RBP8.5□□□□□ -1.05
COL6A6-201ENST00000358511 OR8K5Q8NH50 307 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 TESCQ96BS2 214 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 AGPAT4Q9NRZ5 378 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 ASXL3Q9C0F0 2248 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 TRAV19A0A0A6YYK7 116 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 SMIM30A4D0T7 59 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 IFNA17P01571 189 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 CA5AP35218 305 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 MC2RQ01718 297 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 GXYLT1Q4G148 440 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 CES5AQ6NT32 575 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 RGL4Q8IZJ4 473 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 ARL11Q969Q4 196 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 CLIP3Q96DZ5 547 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 TMEM181Q9P2C4 612 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 GNG8Q9UK08 70 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 RGPD1P0DJD0 1748 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 ANKRD31Q8N7Z5 1873 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 E7ESA3 106 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 BPNT1O95861 308 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 KRBOX4Q5JUW0 171 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 ATG9BQ674R7 924 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 SERPINA9Q86WD7 417 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 FOXRED2Q8IWF2 684 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 HS3ST5Q8IZT8 346 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 HMCESQ96FZ2 354 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 BCL9LQ86UU0 1499 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 LCHNA4D1U4 455 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 CAPN14A8MX76 684 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 SOX14O95416 240 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 MT-ND2P03891 347 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 GKN3PP0CG01 181 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 CYP2B6P20813 491 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 GRM2Q14416 872 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 PRAMEF18Q5VWM3 479 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 FRG2Q64ET8 278 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 FAM122CQ6P4D5 195 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 PLEKHH3Q7Z736 793 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 IGDCC3Q8IVU1 814 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 FRG2BQ96QU4 278 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 FCRL5Q96RD9 977 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 CD180Q99467 661 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 PCDHGB2Q9Y5G2 931 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 C5P01031 1676 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 CST3P01034 146 aaPredicted RBP8.5□□□□□ -1.05
COL6A6-201ENST00000358511 C10orf62Q5T681 223 aaPredicted RBP8.5□□□□□ -1.05
COL6A6-201ENST00000358511 ZNF366Q8N895 744 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms