RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 RYKP34925 604 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 YAP1P46937 504 aaKnown RBP13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 METAP1P53582 386 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 DDX39BQ13838 428 aaKnown RBP13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 LRRC32Q14392 662 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 ZNF658BQ4V348 819 aaPredicted RBP13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 BCL7AQ4VC05 210 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 FNDC3BQ53EP0 1204 aaKnown RBP13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 SHQ1Q6PI26 577 aaKnown RBP13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 SPESP1Q6UW49 350 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 DTWD2Q8NBA8 298 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 OR7A2PQ8NGA2 310 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 MTERF1Q99551 399 aaKnown RBP13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 AMBRA1Q9C0C7 1298 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 REXO4Q9GZR2 422 aaKnown RBP13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 IRF2BPLQ9H1B7 796 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 CHRDQ9H2X0 955 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 GPN2Q9H9Y4 310 aaPredicted RBP13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 FANCEQ9HB96 536 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 SGK2Q9HBY8 427 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 DEC1Q9P2X7 70 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 UTS2RQ9UKP6 389 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 AP1M2Q9Y6Q5 423 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 SH3PXD2BA1X283 911 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 PRRT4C9JH25 899 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 H3BM21 787 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 K7EQS6 105 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 FPGTO14772 594 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 E2F6O75461 281 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 SLC16A8O95907 504 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 SOD1P00441 154 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 COX7A2P14406 83 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 CCNA2P20248 432 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 SEC13P55735 322 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 VAC14Q08AM6 782 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 KCNAB2Q13303 367 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 ZNF691Q5VV52 312 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 XAF1Q6GPH4 301 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 DOK6Q6PKX4 331 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 ZNF765Q7L2R6 523 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 R3HCC1LQ7Z5L2 792 aaKnown RBP13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 ARL10Q8N8L6 244 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 FBXO15Q8NCQ5 510 aaPredicted RBP13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 SETD9Q8NE22 299 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 TMIEQ8NEW7 156 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 FNDC8Q8TC99 324 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 FBLIM1Q8WUP2 373 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 OR8D1Q8WZ84 308 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 BORCS5Q969J3 196 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 ZNF566Q969W8 418 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 NUS1Q96E22 293 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 DCUN1D5Q9BTE7 237 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 SPATA9Q9BWV2 254 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 ZCCHC2Q9C0B9 1178 aaKnown RBP13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 ADNPQ9H2P0 1102 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 BRF2Q9HAW0 419 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 FAM120CQ9NX05 1096 aaKnown RBP13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 RPS6KA6Q9UK32 745 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 NAALAD2Q9Y3Q0 740 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 PCDHGA8Q9Y5G5 932 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 MAGED1Q9Y5V3 778 aaPredicted RBP13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 HSPE1-MOB4S4R3N1 261 aa13.75□□□□□ -0.21
NIPAL3-203ENST00000358028 EML5Q05BV3 1969 aa13.74□□□□□ -0.21
NIPAL3-203ENST00000358028 FRYLO94915 3013 aa13.74□□□□□ -0.21
NIPAL3-203ENST00000358028 EDDM13A0A1B0GTR0 161 aa13.74□□□□□ -0.21
NIPAL3-203ENST00000358028 LOC100130705A0A1B0GUX0 176 aa13.74□□□□□ -0.21
NIPAL3-203ENST00000358028 C1orf105O95561 183 aa13.74□□□□□ -0.21
NIPAL3-203ENST00000358028 APODP05090 189 aa13.74□□□□□ -0.21
NIPAL3-203ENST00000358028 CCDC159P0C7I6 412 aa13.74□□□□□ -0.21
NIPAL3-203ENST00000358028 HLA-EP13747 358 aa13.74□□□□□ -0.21
NIPAL3-203ENST00000358028 POLR2IP36954 125 aaKnown RBP13.74□□□□□ -0.21
NIPAL3-203ENST00000358028 WNT3P56703 355 aa13.74□□□□□ -0.21
NIPAL3-203ENST00000358028 ACSM2AQ08AH3 577 aa13.74□□□□□ -0.21
NIPAL3-203ENST00000358028 ELP6Q0PNE2 266 aa13.74□□□□□ -0.21
NIPAL3-203ENST00000358028 SLC14A1Q13336 389 aa13.74□□□□□ -0.21
NIPAL3-203ENST00000358028 ZNF829Q3KNS6 432 aaPredicted RBP13.74□□□□□ -0.21
NIPAL3-203ENST00000358028 C9orf64Q5T6V5 341 aa13.74□□□□□ -0.21
NIPAL3-203ENST00000358028 ACSM2BQ68CK6 577 aa13.74□□□□□ -0.21
NIPAL3-203ENST00000358028 ZNF551Q7Z340 670 aaPredicted RBP13.74□□□□□ -0.21
NIPAL3-203ENST00000358028 TRIM74Q86UV6 250 aa13.74□□□□□ -0.21
NIPAL3-203ENST00000358028 DCP2Q8IU60 420 aaKnown RBP13.74□□□□□ -0.21
NIPAL3-203ENST00000358028 SPARTQ8N0X7 666 aa13.74□□□□□ -0.21
NIPAL3-203ENST00000358028 PANX1Q96RD7 426 aa13.74□□□□□ -0.21
NIPAL3-203ENST00000358028 PREBQ9HCU5 417 aa13.74□□□□□ -0.21
NIPAL3-203ENST00000358028 TM9SF3Q9HD45 589 aa13.74□□□□□ -0.21
NIPAL3-203ENST00000358028 ZDHHC4Q9NPG8 344 aa13.74□□□□□ -0.21
NIPAL3-203ENST00000358028 FAM86C1Q9NVL1 165 aa13.74□□□□□ -0.21
NIPAL3-203ENST00000358028 C2orf42Q9NWW7 574 aa13.74□□□□□ -0.21
NIPAL3-203ENST00000358028 FANCMQ8IYD8 2048 aa13.74□□□□□ -0.21
NIPAL3-203ENST00000358028 HS6ST1O60243 411 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 SCN2BO60939 215 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 LILRB5O75023 590 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 UGT2B11O75310 529 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 ENTPD1P49961 510 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 ARHGDIAP52565 204 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 IST1P53990 364 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 PNLIPRP1P54315 467 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 CD47Q08722 323 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 NFATC3Q12968 1075 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 LAPTM5Q13571 262 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms