RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 FAPQ12884 760 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 ALFQ53S48 1182 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 DOK6Q6PKX4 331 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.28□□□□□ -0.76
CAPN3-205ENST00000357568 ZNF551Q7Z340 670 aaPredicted RBP10.28□□□□□ -0.76
CAPN3-205ENST00000357568 ELMOD2Q8IZ81 293 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 SYNPOQ8N3V7 929 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 DCBLD1Q8N8Z6 715 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 SCAMP5Q8TAC9 235 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 NUDT8Q8WV74 236 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 NEDD4LQ96PU5 975 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 MGLLQ99685 303 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 TTPALQ9BTX7 342 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 GTPBP2Q9BX10 602 aaKnown RBP10.28□□□□□ -0.76
CAPN3-205ENST00000357568 PRO3102Q9H379 93 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 C14orf119Q9NWQ9 140 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 ERVK13-1Q9NX77 482 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 hCG_2039718K7EN88 272 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 CTDSP2O14595 271 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 SCG5P05408 212 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 IL12RB1P42701 662 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 HSPA14Q0VDF9 509 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 LAPTM4AQ15012 233 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 ZNF79Q15937 498 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 GLYR1Q49A26 553 aaPredicted RBP10.28□□□□□ -0.76
CAPN3-205ENST00000357568 SLC35F1Q5T1Q4 408 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 MEDAGQ5VYS4 303 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 OTOP2Q7RTS6 562 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 DDX53Q86TM3 631 aaKnown RBP10.28□□□□□ -0.76
CAPN3-205ENST00000357568 FAM124AQ86V42 546 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 NLRP8Q86W28 1048 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 PTOV1Q86YD1 416 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 UBE2FQ969M7 185 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 FRMD6Q96NE9 622 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 PSKH2Q96QS6 385 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 MAPKAP1Q9BPZ7 522 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 TTYH2Q9BSA4 534 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 INPP5KQ9BT40 448 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 ITM2CQ9NQX7 267 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 FAM120CQ9NX05 1096 aaKnown RBP10.28□□□□□ -0.76
CAPN3-205ENST00000357568 B3GNT2Q9NY97 397 aa10.28□□□□□ -0.76
CAPN3-205ENST00000357568 AP3D1O14617 1153 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 HLA-DQB1P01920 261 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 MYL9P24844 172 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 PTBP1P26599 531 aaKnown RBP eCLIP10.27□□□□□ -0.77
CAPN3-205ENST00000357568 HLA-FP30511 346 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 MC4RP32245 332 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 RAB25P57735 213 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 TSPY1Q01534 308 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 UPP1Q16831 310 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 C5orf22Q49AR2 442 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 TIGD5Q53EQ6 642 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 PSAPL1Q6NUJ1 521 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 SLC44A2Q8IWA5 706 aaPredicted RBP10.27□□□□□ -0.77
CAPN3-205ENST00000357568 PIANPQ8IYJ0 282 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 THEM5Q8N1Q8 247 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 IL17RCQ8NAC3 791 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 OR4C15Q8NGM1 316 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 CSGALNACT1Q8TDX6 532 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 ZFYVE19Q96K21 471 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 MSLNLQ96KJ4 702 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 RNF121Q9H920 327 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 NMUR1Q9HB89 426 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 MRPL39Q9NYK5 338 aaKnown RBP10.27□□□□□ -0.77
CAPN3-205ENST00000357568 CMAHPQ9Y471 501 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 TIMM13Q9Y5L4 95 aaPredicted RBP10.27□□□□□ -0.77
CAPN3-205ENST00000357568 CENPFP49454 3210 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 A0A1W2PQH9 124 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 ZNF670-ZNF695F2Z2N8 137 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 CLIC1O00299 241 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 ITGB1P05556 798 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 ACADMP11310 421 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 TYMPP19971 482 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 PRPS1L1P21108 318 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 PCGF2P35227 344 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 KIR3DL1P43629 444 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 KCNJ10P78508 379 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 GPLD1P80108 840 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 CACNG1Q06432 222 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 RUNX1T1Q06455 604 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 SLAMF1Q13291 335 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 TEAD4Q15561 434 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 ESCO2Q56NI9 601 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 Q5BKY6 102 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 GPR153Q6NV75 609 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 CLDN22Q8N7P3 220 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 C3orf58Q8NDZ4 430 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 MDGA1Q8NFP4 955 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 REPS1Q96D71 796 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 DMRTB1Q96MA1 342 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 ZFP42Q96MM3 310 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 SAMD11Q96NU1 681 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 ASPNQ9BXN1 380 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 MRPL9Q9BYD2 267 aaKnown RBP10.27□□□□□ -0.77
CAPN3-205ENST00000357568 MAGEH1Q9H213 219 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 ZNF556Q9HAH1 456 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 PLSCR3Q9NRY6 295 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 GIMAP4Q9NUV9 329 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 TMLHEQ9NVH6 421 aa10.27□□□□□ -0.77
CAPN3-205ENST00000357568 ELOVL2Q9NXB9 296 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms