RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 IL18R1Q13478 541 aa7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 LRRC26Q2I0M4 334 aa7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 SPANXN2Q5MJ10 180 aa7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 ATG9BQ674R7 924 aa7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 CREB3L2Q70SY1 520 aa7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 CCDC71Q8IV32 467 aaPredicted RBP7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 CLECL1Q8IZS7 167 aa7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 STX19Q8N4C7 294 aa7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 CARNMT1Q8N4J0 409 aa7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 AMER2Q8N7J2 671 aa7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 VANGL1Q8TAA9 524 aaPredicted RBP7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 EID2BQ96D98 161 aa7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 PTPN18Q99952 460 aa7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 CPPED1Q9BRF8 314 aaPredicted RBP7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.96□□□□□ -1.132e-6■■□□□ 13.9
CDC42SE1-201ENST00000357235 MAGEH1Q9H213 219 aa7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 MCCC2Q9HCC0 563 aa7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 IL1RAPQ9NPH3 570 aa7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 ERVK13-1Q9NX77 482 aa7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 SIRT5Q9NXA8 310 aa7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 GPR83Q9NYM4 423 aa7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 CCDC59Q9P031 241 aaKnown RBP7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 GMEB2Q9UKD1 530 aa7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 DIMT1Q9UNQ2 313 aaKnown RBP7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 CCL27Q9Y4X3 112 aa7.96□□□□□ -1.13
CDC42SE1-201ENST00000357235 OTOFQ9HC10 1997 aa7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 PNMA8CA0A1B0GUJ8 204 aa7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 FAM220BPB1ANY3 271 aa7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 K7ERQ8 282 aa7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 FPGTO14772 594 aa7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 TFECO14948 347 aaPredicted RBP7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 TLL1O43897 1013 aa7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 CCNDBP1O95273 360 aa7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 CLDN9O95484 217 aa7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 HOXB1P14653 301 aaPredicted RBP7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 AZGP1P25311 298 aaKnown RBP7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 KIR3DL1P43629 444 aa7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 OR1E2P47887 323 aa7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 RPIAP49247 311 aa7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 POLR2GP62487 172 aaKnown RBP eCLIP7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 CACNG1Q06432 222 aa7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 MED22Q15528 200 aa7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 RGMBQ6NW40 437 aa7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 XKRXQ6PP77 449 aa7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 ZNF600Q6ZNG1 722 aa7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 ZNF551Q7Z340 670 aaPredicted RBP7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 SNX20Q7Z614 316 aa7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 SYT12Q8IV01 421 aa7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 PLPP6Q8IY26 295 aa7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 STK40Q8N2I9 435 aa7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 KIAA1958Q8N8K9 716 aa7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 TESCQ96BS2 214 aa7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 APIPQ96GX9 242 aa7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 TTPALQ9BTX7 342 aa7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 BBS2Q9BXC9 721 aa7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 ATG10Q9H0Y0 220 aa7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 RAD18Q9NS91 495 aa7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 NUFIP1Q9UHK0 495 aaKnown RBP7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 MKLN1Q9UL63 735 aa7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 PCDHB8Q9UN66 801 aa7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 NAALAD2Q9Y3Q0 740 aa7.96□□□□□ -1.14
CDC42SE1-201ENST00000357235 ATG13O75143 517 aa7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 OR2B3O76000 313 aa7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 WDR47O94967 919 aa7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 SNX4O95219 450 aa7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 TP53P04637 393 aaPredicted RBP7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 STSP08842 583 aa7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 NUDT7P0C024 238 aa7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 ITGAMP11215 1152 aa7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 COX7A2P14406 83 aa7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 TYMPP19971 482 aa7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 FPR1P21462 350 aa7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 DGKAP23743 735 aa7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 POU1F1P28069 291 aa7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 HOXA9P31269 272 aa7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 CTSKP43235 329 aa7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 HAAOP46952 286 aa7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 PPP3CCP48454 512 aa7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 NRIP1P48552 1158 aa7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 MRPL19P49406 292 aaKnown RBP7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 CRISP3P54108 245 aa7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 SNRPD2P62316 118 aaKnown RBP7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 ABHD18Q0P651 414 aa7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 SLAMF1Q13291 335 aa7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 TSTA3Q13630 321 aaPredicted RBP7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 NFE2L1Q14494 772 aa7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 KDM4DQ6B0I6 523 aa7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 CAPN13Q6MZZ7 669 aaPredicted RBP7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 TMEM65Q6PI78 240 aa7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 TSPYL5Q86VY4 417 aaPredicted RBP7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 PHC2Q8IXK0 858 aa7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 ENTHD1Q8IYW4 607 aa7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 LILRB2Q8N423 598 aa7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 SLC38A4Q969I6 547 aa7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 MTERF1Q99551 399 aaKnown RBP7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 TSEN34Q9BSV6 310 aaKnown RBP7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 KCNH6Q9H252 994 aa7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 MAGIXQ9H6Y5 334 aa7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 CCNB1IP1Q9NPC3 277 aa7.95□□□□□ -1.14
CDC42SE1-201ENST00000357235 FANCFQ9NPI8 374 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms