RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 SELENOMQ8WWX9 145 aa18.22■□□□□ 0.51
PRPF39-201ENST00000355765 APIPQ96GX9 242 aa18.22■□□□□ 0.51
PRPF39-201ENST00000355765 A0A1W2PQL4 384 aaPredicted RBP18.22■□□□□ 0.51
PRPF39-201ENST00000355765 SHOXO15266 292 aa18.22■□□□□ 0.51
PRPF39-201ENST00000355765 KIR3DL1P43629 444 aa18.22■□□□□ 0.51
PRPF39-201ENST00000355765 DSC3Q14574 896 aa18.22■□□□□ 0.51
PRPF39-201ENST00000355765 LARS2Q15031 903 aaKnown RBP18.22■□□□□ 0.51
PRPF39-201ENST00000355765 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.22■□□□□ 0.51
PRPF39-201ENST00000355765 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.22■□□□□ 0.51
PRPF39-201ENST00000355765 DENND6BQ8NEG7 585 aa18.22■□□□□ 0.51
PRPF39-201ENST00000355765 IL4I1Q96RQ9 567 aa18.22■□□□□ 0.51
PRPF39-201ENST00000355765 CD244Q9BZW8 370 aa18.22■□□□□ 0.51
PRPF39-201ENST00000355765 CIPCQ9C0C6 399 aa18.22■□□□□ 0.51
PRPF39-201ENST00000355765 RIMKLBQ9ULI2 386 aa18.22■□□□□ 0.51
PRPF39-201ENST00000355765 DHRS7Q9Y394 339 aa18.22■□□□□ 0.51
PRPF39-201ENST00000355765 TRIP12Q14669 1992 aaPredicted RBP18.22■□□□□ 0.51
PRPF39-201ENST00000355765 CA12O43570 354 aa18.21■□□□□ 0.51
PRPF39-201ENST00000355765 PRAMEF11O60813 436 aa18.21■□□□□ 0.51
PRPF39-201ENST00000355765 B3GAT3O94766 335 aa18.21■□□□□ 0.51
PRPF39-201ENST00000355765 ACPPP15309 386 aa18.21■□□□□ 0.51
PRPF39-201ENST00000355765 ALAS2P22557 587 aa18.21■□□□□ 0.51
PRPF39-201ENST00000355765 RAB25P57735 213 aa18.21■□□□□ 0.51
PRPF39-201ENST00000355765 HNRNPA0Q13151 305 aaKnown RBP18.21■□□□□ 0.51
PRPF39-201ENST00000355765 FBXL6Q8N531 539 aa18.21■□□□□ 0.51
PRPF39-201ENST00000355765 OR7D4Q8NG98 312 aa18.21■□□□□ 0.51
PRPF39-201ENST00000355765 C12orf4Q9NQ89 552 aa18.21■□□□□ 0.51
PRPF39-201ENST00000355765 MCUBQ9NWR8 336 aa18.21■□□□□ 0.51
PRPF39-201ENST00000355765 FNIP2Q9P278 1114 aa18.21■□□□□ 0.51
PRPF39-201ENST00000355765 VPS9D1Q9Y2B5 631 aa18.21■□□□□ 0.51
PRPF39-201ENST00000355765 MAGEB17A8MXT2 336 aa18.21■□□□□ 0.51
PRPF39-201ENST00000355765 C1QBP02746 253 aa18.21■□□□□ 0.51
PRPF39-201ENST00000355765 PTGS2P35354 604 aa18.21■□□□□ 0.51
PRPF39-201ENST00000355765 GPR15P49685 360 aa18.21■□□□□ 0.51
PRPF39-201ENST00000355765 TNK1Q13470 666 aa18.21■□□□□ 0.51
PRPF39-201ENST00000355765 ARHGEF7Q14155 803 aa18.21■□□□□ 0.51
PRPF39-201ENST00000355765 C9orf131Q5VYM1 1079 aa18.21■□□□□ 0.51
PRPF39-201ENST00000355765 PTRHD1Q6GMV3 140 aaKnown RBP18.21■□□□□ 0.51
PRPF39-201ENST00000355765 ZNF767PQ75MW2 155 aa18.21■□□□□ 0.51
PRPF39-201ENST00000355765 SLC34A3Q8N130 599 aa18.21■□□□□ 0.51
PRPF39-201ENST00000355765 CLDN19Q8N6F1 224 aa18.21■□□□□ 0.51
PRPF39-201ENST00000355765 C9orf43Q8TAL5 461 aaPredicted RBP18.21■□□□□ 0.51
PRPF39-201ENST00000355765 FATE1Q969F0 183 aa18.21■□□□□ 0.51
PRPF39-201ENST00000355765 SLC39A13Q96H72 371 aa18.21■□□□□ 0.51
PRPF39-201ENST00000355765 SPON2Q9BUD6 331 aa18.21■□□□□ 0.51
PRPF39-201ENST00000355765 CDCA4Q9BXL8 241 aa18.21■□□□□ 0.51
PRPF39-201ENST00000355765 NDUFAF4Q9P032 175 aa18.21■□□□□ 0.51
PRPF39-201ENST00000355765 TLR6Q9Y2C9 796 aa18.21■□□□□ 0.51
PRPF39-201ENST00000355765 RRN3P2A6NIE6 340 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 J3KTA2 159 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 PLD2O14939 933 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 AP2A2O94973 939 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 DUOXA1Q1HG43 343 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 MOB2Q70IA6 237 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 SLC51BQ86UW2 128 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 GPR152Q8TDT2 470 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 TMEM203Q969S6 136 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 BOCQ9BWV1 1114 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.2■□□□□ 0.5
PRPF39-201ENST00000355765 ASIC5Q9NY37 505 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 NDRG2Q9UN36 371 aaKnown RBP18.2■□□□□ 0.5
PRPF39-201ENST00000355765 HCN4Q9Y3Q4 1203 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 TNFRSF10BO14763 440 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 CCNB2O95067 398 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 PRLP01236 227 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 EPB42P16452 691 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 CRYBB2P43320 205 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 PLAG1Q6DJT9 500 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 PTCHD4Q6ZW05 846 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 BBS7Q8IWZ6 715 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 CARNMT1Q8N4J0 409 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 PCNPQ8WW12 178 aaKnown RBP18.2■□□□□ 0.5
PRPF39-201ENST00000355765 USP7Q93009 1102 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 FAM126AQ9BYI3 521 aaPredicted RBP18.2■□□□□ 0.5
PRPF39-201ENST00000355765 B3GNT4Q9C0J1 378 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 ZNF556Q9HAH1 456 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 TLR8Q9NR97 1041 aaKnown RBP18.2■□□□□ 0.5
PRPF39-201ENST00000355765 NLKQ9UBE8 527 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 POFUT2Q9Y2G5 429 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 A8MUA0 341 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 RPS3P23396 243 aaKnown RBP eCLIP18.2■□□□□ 0.54e-8■■■■□ 19.6
PRPF39-201ENST00000355765 HLA-DMAP28067 261 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 MAN2A2P49641 1150 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 SF1Q15637 639 aaKnown RBP18.2■□□□□ 0.5
PRPF39-201ENST00000355765 TOR1AIP1Q5JTV8 583 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.2■□□□□ 0.57e-10■■■□□ 15.3
PRPF39-201ENST00000355765 WDFY2Q96P53 400 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 ACBD6Q9BR61 282 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.2■□□□□ 0.5
PRPF39-201ENST00000355765 MROH8Q9H579 483 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 TRIM45Q9H8W5 580 aaPredicted RBP18.2■□□□□ 0.5
PRPF39-201ENST00000355765 GLTPQ9NZD2 209 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 KLHL21Q9UJP4 597 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 RABL2BQ9UNT1 228 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 POLHQ9Y253 713 aa18.2■□□□□ 0.5
PRPF39-201ENST00000355765 SMIM35A0A1B0GVV1 85 aa18.19■□□□□ 0.5
PRPF39-201ENST00000355765 F8W810 466 aa18.19■□□□□ 0.5
PRPF39-201ENST00000355765 ODC1P11926 461 aa18.19■□□□□ 0.5
PRPF39-201ENST00000355765 PTGES3Q15185 160 aaKnown RBP18.19■□□□□ 0.5
PRPF39-201ENST00000355765 TRIM71Q2Q1W2 868 aaKnown RBP18.19■□□□□ 0.5
PRPF39-201ENST00000355765 LIPKQ5VXJ0 399 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms