RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 VIPR1P32241 457 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 ZC3HC1Q86WB0 502 aaKnown RBP5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 PHC2Q8IXK0 858 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 FANK1Q8TC84 345 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 KCNH6Q9H252 994 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 ZNF701Q9NV72 531 aaPredicted RBP5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 ZNF536O15090 1300 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 ASXL3Q9C0F0 2248 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 H7C2Y5 167 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 IRAK2O43187 625 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 PROM1O43490 865 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 CCND3P30281 292 aaPredicted RBP5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 GRIA2P42262 883 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 TAS2R43P59537 309 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 HERVK_113P63132 956 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 ERVK-8P63133 956 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 ATXN7L3Q14CW9 347 aaPredicted RBP5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 SLC39A4Q6P5W5 647 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 NAPRTQ6XQN6 538 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 WACQ9BTA9 647 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 ERVK-6Q9BXR3 956 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 GPR88Q9GZN0 384 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 CD320Q9NPF0 282 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 ZNF175Q9Y473 711 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 CPNE6O95741 557 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 CST3P01034 146 aaPredicted RBP5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 RAB4AP20338 218 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 ZNF84P51523 738 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 GLT8D1Q68CQ7 371 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 ABHD15Q6UXT9 468 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 OR4E2Q8NGC2 313 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 OR56A1Q8NGH5 318 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 NSMAFQ92636 917 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 ESAMQ96AP7 390 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 DCSTAMPQ9H295 470 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 BCAS3Q9H6U6 928 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 LDB2O43679 373 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 MTX2O75431 263 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 C4BPAP04003 597 aaKnown RBP5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 HNRNPDQ14103 355 aaKnown RBP5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 BORAQ6PGQ7 559 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 MON1BQ7L1V2 547 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 SPOCK2Q92563 424 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 FUCA2Q9BTY2 467 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 KATNBL1Q9H079 304 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 ZIM2Q9NZV7 527 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 CCRL2O00421 344 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 LRCH4O75427 683 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 IL3P08700 152 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 CD48P09326 243 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 SLC6A6P31641 620 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 RBM39Q14498 530 aaKnown RBP5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 LASP1Q14847 261 aaKnown RBP5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 TRAPPC6BQ86SZ2 158 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 FAM156AQ8NDB6 213 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 PDZD7Q9H5P4 517 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 TFB2MQ9H5Q4 396 aaKnown RBP5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 SLC7A4O43246 635 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 IFNA1P01562 189 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 GTF2F2P13984 249 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 CD72P21854 359 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 DHCR24Q15392 516 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 CARD17Q5XLA6 110 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 USP29Q9HBJ7 922 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 TMED5Q9Y3A6 229 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 FAM237AA0A1B0GTK4 181 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 RCCD1A6NED2 376 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 RPS2P15880 293 aaKnown RBP5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 F8A1P23610 371 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 C1orf127Q8N9H9 656 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 FCAMRQ8WWV6 532 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 EBF3Q9H4W6 596 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 NIPSNAP2O75323 286 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 IFNA4P05014 189 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 REM2Q8IYK8 340 aaPredicted RBP5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 RAD9AQ99638 391 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 GPR20Q99678 358 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 SLC30A2Q9BRI3 323 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 CCM2Q9BSQ5 444 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 PTTG2Q9NZH5 202 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 KNTC1P50748 2209 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 OR5T1Q8NG75 326 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 MR1Q95460 341 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 PYCR2Q96C36 320 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 MT-ND5P03915 603 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 OPN1SWP03999 348 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 S1PR1P21453 382 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 GRIA1P42261 906 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 SH3D19Q5HYK7 790 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 LRRC55Q6ZSA7 311 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 CPT1BQ92523 772 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 PYURFQ96I23 114 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 LOC100130705A0A1B0GUX0 176 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 ZNF705EA8MWA4 302 aaPredicted RBP5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 ITPRIPL2Q3MIP1 535 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 ZNF584Q8IVC4 421 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 DPEP3Q9H4B8 488 aa5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 DENND2DQ9H6A0 471 aaPredicted RBP5.61□□□□□ -1.51
SRGAP1-201ENST00000355086 H2BFMP0C1H6 154 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms