RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 CLDN7O95471 211 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 CLCN7P51798 805 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 TARDBPQ13148 414 aaKnown RBP eCLIP9.06□□□□□ -0.968e-9■■■■■ 30
SMG6-202ENST00000354901 MAPKAPK3Q16644 382 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 TIGD6Q17RP2 521 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 TYW3Q6IPR3 259 aaKnown RBP9.06□□□□□ -0.96
SMG6-202ENST00000354901 SBSNQ6UWP8 590 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 DET1Q7L5Y6 550 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 P3H2Q8IVL5 708 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 LIX1Q8N485 282 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 WFDC5Q8TCV5 224 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 RIPOR3Q96MK2 946 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 FAM129BQ96TA1 746 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 DPY30Q9C005 99 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 ELOVL2Q9NXB9 296 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 RNF186Q9NXI6 227 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 KIF17Q9P2E2 1029 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 TBC1D24Q9ULP9 559 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 VPS9D1Q9Y2B5 631 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 A0A1W2PRG6 482 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 ZNF840PA6NDX5 716 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 HMX3A6NHT5 357 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 TMEM189-UBE2V1I3L0A0 370 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 LINC01387J3KSC0 135 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 SMAD6O43541 496 aaKnown RBP9.06□□□□□ -0.96
SMG6-202ENST00000354901 SH3BGRLO75368 114 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 SLITRK5O94991 958 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 PFKLP17858 780 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 HTR1EP28566 365 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 PTGER3P43115 390 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 CTSKP43235 329 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 CTAG1AP78358 180 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 MRPL58Q14197 206 aaKnown RBP9.06□□□□□ -0.96
SMG6-202ENST00000354901 NKG7Q16617 165 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 LRRC8DQ7L1W4 858 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 CHMP1BQ7LBR1 199 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 PTRH1Q86Y79 214 aaKnown RBP9.06□□□□□ -0.96
SMG6-202ENST00000354901 ADGRG2Q8IZP9 1017 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 YIPF6Q96EC8 236 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 SLC22A12Q96S37 553 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 ZBTB18Q99592 522 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 APOL4Q9BPW4 351 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 MS4A7Q9GZW8 240 aaPredicted RBP9.06□□□□□ -0.96
SMG6-202ENST00000354901 TMEM161AQ9NX61 479 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 CRLS1Q9UJA2 301 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 OSGIN1Q9UJX0 560 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 FBXO10Q9UK96 956 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 PRKAB1Q9Y478 270 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 PNMA8CA0A1B0GUJ8 204 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 CD160O95971 181 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 ESR1P03372 595 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 F11P03951 625 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 ADORA3P0DMS8 318 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 EFNA1P20827 205 aaPredicted RBP9.06□□□□□ -0.96
SMG6-202ENST00000354901 SDHBP21912 280 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 KELP23276 732 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 IGFBP5P24593 272 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 SMAD3P84022 425 aaKnown RBP9.06□□□□□ -0.96
SMG6-202ENST00000354901 HSPA14Q0VDF9 509 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 CDH18Q13634 790 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 COQ5Q5HYK3 327 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 CXorf57Q6NSI4 855 aaKnown RBP9.06□□□□□ -0.96
SMG6-202ENST00000354901 METTL2BQ6P1Q9 378 aaKnown RBP9.06□□□□□ -0.96
SMG6-202ENST00000354901 GALNT10Q86SR1 603 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 RAET1EQ8TD07 263 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 SLC13A3Q8WWT9 602 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 ZNF583Q96ND8 569 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 TSSK3Q96PN8 268 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 SLC30A2Q9BRI3 323 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 GON7Q9BXV9 100 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 ACTR8Q9H981 624 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 ACOT13Q9NPJ3 140 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 TAS2R16Q9NYV7 291 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 IL17CQ9P0M4 197 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 CYB5R1Q9UHQ9 305 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 MUTYHQ9UIF7 546 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 MAGEL2Q9UJ55 1249 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 ZNF490Q9ULM2 529 aaPredicted RBP9.06□□□□□ -0.96
SMG6-202ENST00000354901 DHRS7Q9Y394 339 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 FRMPD3Q5JV73 1810 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 COL4A4P53420 1690 aaPredicted RBP9.05□□□□□ -0.96
SMG6-202ENST00000354901 EFCAB10A6NFE3 127 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 LOC730098B7Z3J9 87 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 NBNO60934 754 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 OTCP00480 354 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 PLATP00750 562 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 GALTP07902 379 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 EPHA2P29317 976 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 GRK5P34947 590 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 SOX6P35712 828 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 CSKP41240 450 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 CENPAP49450 140 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 ISL1P61371 349 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 ZNF45Q02386 682 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 DMC1Q14565 340 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 QPRTQ15274 297 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 BAK1Q16611 211 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 ADGRF1Q5T601 910 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 ALG1LQ6GMV1 187 aa9.05□□□□□ -0.96
SMG6-202ENST00000354901 LAIR1Q6GTX8 287 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms