RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 TDHQ8IZJ6 230 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 OXR1Q8N573 874 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 PTCHD1Q96NR3 888 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 APOOQ9BUR5 198 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 TMED5Q9Y3A6 229 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 LILRB3O75022 631 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 ATXN1LP0C7T5 689 aaKnown RBP13.22□□□□□ -0.29
SMC6-201ENST00000351948 ERVPABLB-1P60509 514 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 SLAMF1Q13291 335 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 ATP1A4Q13733 1029 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 ASPGQ86U10 573 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 TMC8Q8IU68 726 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.22□□□□□ -0.29
SMC6-201ENST00000351948 PIGXQ8TBF5 258 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 SH3YL1Q96HL8 342 aaPredicted RBP13.22□□□□□ -0.29
SMC6-201ENST00000351948 MYRFLQ96LU7 910 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 TXLNGYQ9BZA5 131 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 CLK4Q9HAZ1 481 aaKnown RBP13.22□□□□□ -0.29
SMC6-201ENST00000351948 P2RX2Q9UBL9 471 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 PAPPA2Q9BXP8 1791 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 TRBC2A0A5B9 178 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 DFNA5O60443 496 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 RAP2AP10114 183 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 ALOX12P18054 663 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 PRDX3P30048 256 aaKnown RBP13.22□□□□□ -0.29
SMC6-201ENST00000351948 ZNF311Q5JNZ3 666 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 KHDRBS2Q5VWX1 349 aaKnown RBP13.22□□□□□ -0.29
SMC6-201ENST00000351948 CYS1Q717R9 158 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 JAZF1Q86VZ6 243 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 GATSQ8NAP1 163 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 TVP23BQ9NYZ1 205 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 HSFX1Q9UBD0 423 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 OAZ3Q9UMX2 235 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 IFNGP01579 166 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 AOC1P19801 751 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 FUT4P22083 530 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 DNAJB1P25685 340 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 KCNC3Q14003 757 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 IRF4Q15306 451 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 INAVAQ3KP66 663 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 ADAMTS19Q8TE59 1207 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 MR1Q95460 341 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 NT5C3BQ969T7 300 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 CDADC1Q9BWV3 514 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 SLITRK2Q9H156 845 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 SHANK3Q9BYB0 1731 aa13.21□□□□□ -0.29
SMC6-201ENST00000351948 DUXAA6NLW8 204 aa13.21□□□□□ -0.29
SMC6-201ENST00000351948 TBX10O75333 385 aa13.21□□□□□ -0.29
SMC6-201ENST00000351948 ZNF217O75362 1048 aa13.21□□□□□ -0.29
SMC6-201ENST00000351948 OR1E2P47887 323 aa13.21□□□□□ -0.29
SMC6-201ENST00000351948 PSMD4P55036 377 aaKnown RBP13.21□□□□□ -0.29
SMC6-201ENST00000351948 ACTR3P61158 418 aa13.21□□□□□ -0.29
SMC6-201ENST00000351948 DLG1Q12959 904 aa13.21□□□□□ -0.29
SMC6-201ENST00000351948 CCINQ13939 588 aa13.21□□□□□ -0.29
SMC6-201ENST00000351948 LIPJQ5W064 366 aa13.21□□□□□ -0.29
SMC6-201ENST00000351948 ANKRD54Q6NXT1 300 aa13.21□□□□□ -0.29
SMC6-201ENST00000351948 TTLL10Q6ZVT0 673 aa13.21□□□□□ -0.29
SMC6-201ENST00000351948 MCEMP1Q8IX19 187 aa13.21□□□□□ -0.29
SMC6-201ENST00000351948 TMEM156Q8N614 296 aa13.21□□□□□ -0.29
SMC6-201ENST00000351948 ZDHHC1Q8WTX9 485 aa13.21□□□□□ -0.29
SMC6-201ENST00000351948 ZDHHC12Q96GR4 267 aa13.21□□□□□ -0.29
SMC6-201ENST00000351948 MUC13Q9H3R2 512 aa13.21□□□□□ -0.29
SMC6-201ENST00000351948 MARCH7Q9H992 704 aa13.21□□□□□ -0.29
SMC6-201ENST00000351948 ZC4H2Q9NQZ6 224 aa13.21□□□□□ -0.29
SMC6-201ENST00000351948 STOX2Q9P2F5 926 aaPredicted RBP13.21□□□□□ -0.29
SMC6-201ENST00000351948 PHF11Q9UIL8 331 aa13.21□□□□□ -0.29
SMC6-201ENST00000351948 MCM3APO60318 1980 aa13.21□□□□□ -0.29
SMC6-201ENST00000351948 SMIM31A0A1B0GVY4 71 aa13.21□□□□□ -0.29
SMC6-201ENST00000351948 CCR7P32248 378 aa13.21□□□□□ -0.29
SMC6-201ENST00000351948 FOXA1P55317 472 aa13.21□□□□□ -0.29
SMC6-201ENST00000351948 HNRNPKP61978 463 aaKnown RBP eCLIP13.21□□□□□ -0.293e-6■□□□□ 9
SMC6-201ENST00000351948 UXS1Q8NBZ7 420 aa13.21□□□□□ -0.29
SMC6-201ENST00000351948 DENND1AQ8TEH3 1009 aa13.21□□□□□ -0.29
SMC6-201ENST00000351948 RASSF5Q8WWW0 418 aa13.21□□□□□ -0.29
SMC6-201ENST00000351948 DTD2Q96FN9 168 aa13.21□□□□□ -0.29
SMC6-201ENST00000351948 ACSL6Q9UKU0 697 aa13.21□□□□□ -0.29
SMC6-201ENST00000351948 MAU2Q9Y6X3 613 aa13.21□□□□□ -0.29
SMC6-201ENST00000351948 H3BNC9 293 aa13.21□□□□□ -0.3
SMC6-201ENST00000351948 ANGPTL1O95841 491 aa13.21□□□□□ -0.3
SMC6-201ENST00000351948 CXCL12P48061 93 aa13.21□□□□□ -0.3
SMC6-201ENST00000351948 CDK9P50750 372 aaKnown RBP13.21□□□□□ -0.3
SMC6-201ENST00000351948 RAB28P51157 221 aa13.21□□□□□ -0.3
SMC6-201ENST00000351948 XKP51811 444 aa13.21□□□□□ -0.3
SMC6-201ENST00000351948 SLC5A9Q2M3M2 681 aa13.21□□□□□ -0.3
SMC6-201ENST00000351948 ZNF57Q68EA5 555 aaPredicted RBP13.21□□□□□ -0.3
SMC6-201ENST00000351948 CXorf57Q6NSI4 855 aaKnown RBP13.21□□□□□ -0.3
SMC6-201ENST00000351948 OR10H5Q8NGA6 315 aa13.21□□□□□ -0.3
SMC6-201ENST00000351948 MVB12BQ9H7P6 319 aa13.21□□□□□ -0.3
SMC6-201ENST00000351948 TREX1Q9NSU2 369 aa13.21□□□□□ -0.3
SMC6-201ENST00000351948 PCTPQ9UKL6 214 aa13.21□□□□□ -0.3
SMC6-201ENST00000351948 G3V2L1 256 aa13.21□□□□□ -0.3
SMC6-201ENST00000351948 SLC22A2O15244 555 aa13.21□□□□□ -0.3
SMC6-201ENST00000351948 PRKACGP22612 351 aa13.21□□□□□ -0.3
SMC6-201ENST00000351948 OXTRP30559 389 aa13.21□□□□□ -0.3
SMC6-201ENST00000351948 SIM1P81133 766 aaPredicted RBP13.21□□□□□ -0.3
SMC6-201ENST00000351948 CDK3Q00526 305 aa13.21□□□□□ -0.3
SMC6-201ENST00000351948 HERC3Q15034 1050 aa13.21□□□□□ -0.3
SMC6-201ENST00000351948 SLC30A6Q6NXT4 461 aa13.21□□□□□ -0.3
SMC6-201ENST00000351948 NXPE4Q6UWF7 544 aa13.21□□□□□ -0.3
SMC6-201ENST00000351948 DPPA4Q7L190 304 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms