RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 TICRRQ7Z2Z1 1910 aa6.64□□□□□ -1.35
TRIM55-203ENST00000350034 IGKV1-8A0A0C4DH67 115 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 A6NCN8 305 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 POM121BA6NF01 834 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 CLIC1O00299 241 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 UPK1AO00322 258 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 CXCR6O00574 342 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 SOCS2O14508 198 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 TOR1BO14657 336 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 CREG1O75629 220 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 RASAL1O95294 804 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 LDLRP01130 860 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 C1QCP02747 245 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 GSNP06396 782 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 FURINP09958 794 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 RAP2AP10114 183 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 CKMT2P17540 419 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 ENGP17813 658 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 HNRNPA2B1P22626 353 aaKnown RBP6.63□□□□□ -1.35
TRIM55-203ENST00000350034 RPL10P27635 214 aaKnown RBP6.63□□□□□ -1.35
TRIM55-203ENST00000350034 TPP2P29144 1249 aaPredicted RBP6.63□□□□□ -1.35
TRIM55-203ENST00000350034 MAT2AP31153 395 aaKnown RBP6.63□□□□□ -1.35
TRIM55-203ENST00000350034 ACSL1P33121 698 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 BSGP35613 385 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 HPCAL1P37235 193 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 RPL3P39023 403 aaKnown RBP6.63□□□□□ -1.35
TRIM55-203ENST00000350034 TPMTP51580 245 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 CCR5P51681 352 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 CLDN2P57739 230 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 ABATP80404 500 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 TXNL4AP83876 142 aaKnown RBP6.63□□□□□ -1.35
TRIM55-203ENST00000350034 MEF2AQ02078 507 aaPredicted RBP6.63□□□□□ -1.35
TRIM55-203ENST00000350034 PRDX1Q06830 199 aaKnown RBP6.63□□□□□ -1.35
TRIM55-203ENST00000350034 SLC14A1Q13336 389 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 TSTA3Q13630 321 aaPredicted RBP6.63□□□□□ -1.35
TRIM55-203ENST00000350034 PDK3Q15120 406 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 ZIC1Q15915 447 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 NKG7Q16617 165 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 PRSS53Q2L4Q9 553 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 MPEG1Q2M385 716 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 HKDC1Q2TB90 917 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 ZNF385BQ569K4 471 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 NHSL2Q5HYW2 709 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 TPRG1LQ5T0D9 272 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 TMTC4Q5T4D3 741 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 CPTPQ5TA50 214 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 THEMIS2Q5TEJ8 643 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 KHDRBS2Q5VWX1 349 aaKnown RBP6.63□□□□□ -1.35
TRIM55-203ENST00000350034 OR52E8Q6IFG1 317 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 ERICH5Q6P6B1 374 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 KIAA1324Q6UXG2 1013 aaKnown RBP6.63□□□□□ -1.35
TRIM55-203ENST00000350034 GCNT7Q6ZNI0 430 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 ZBTB49Q6ZSB9 765 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 R3HCC1LQ7Z5L2 792 aaKnown RBP6.63□□□□□ -1.35
TRIM55-203ENST00000350034 PTOV1Q86YD1 416 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 APLFQ8IW19 511 aaPredicted RBP6.63□□□□□ -1.35
TRIM55-203ENST00000350034 CHERPQ8IWX8 916 aaKnown RBP6.63□□□□□ -1.35
TRIM55-203ENST00000350034 ZZZ3Q8IYH5 903 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 PHACTR4Q8IZ21 702 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 CLECL1Q8IZS7 167 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 ZNF687Q8N1G0 1237 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 GALNT4Q8N4A0 578 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 RAB42Q8N4Z0 105 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 C2orf73Q8N5S3 287 aaPredicted RBP6.63□□□□□ -1.35
TRIM55-203ENST00000350034 ANKRD53Q8N9V6 530 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 TMEM145Q8NBT3 493 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 GPR156Q8NFN8 814 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 OR2A1Q8NGT9 310 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 RPLP0P6Q8NHW5 317 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 CREB3L4Q8TEY5 395 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 FAM3CQ92520 227 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 SH3KBP1Q96B97 665 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 PPWD1Q96BP3 646 aaKnown RBP6.63□□□□□ -1.35
TRIM55-203ENST00000350034 FAM120BQ96EK7 910 aaKnown RBP6.63□□□□□ -1.35
TRIM55-203ENST00000350034 ZNF764Q96H86 408 aaPredicted RBP6.63□□□□□ -1.35
TRIM55-203ENST00000350034 WDR92Q96MX6 357 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 PANX1Q96RD7 426 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 PRPF18Q99633 342 aaKnown RBP6.63□□□□□ -1.35
TRIM55-203ENST00000350034 CIB1Q99828 191 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 CENPKQ9BS16 269 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 TBCDQ9BTW9 1192 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 C9orf16Q9BUW7 83 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 SPATA9Q9BWV2 254 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 PHF7Q9BWX1 381 aaPredicted RBP6.63□□□□□ -1.35
TRIM55-203ENST00000350034 OSBPL11Q9BXB4 747 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 UGT2B28Q9BY64 529 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 TRIM4Q9C037 500 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 CHST8Q9H2A9 424 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 CHRDQ9H2X0 955 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 PIF1Q9H611 641 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 MAGIXQ9H6Y5 334 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 KIR3DX1Q9H7L2 352 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 NTN4Q9HB63 628 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 CD93Q9NPY3 652 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 DCAF13Q9NV06 445 aaKnown RBP6.63□□□□□ -1.35
TRIM55-203ENST00000350034 UBAP1Q9NZ09 502 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 AHSPQ9NZD4 102 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 SCHIP1Q9P0W5 487 aaPredicted RBP6.63□□□□□ -1.35
TRIM55-203ENST00000350034 THEGQ9P2T0 379 aa6.63□□□□□ -1.35
TRIM55-203ENST00000350034 EBF1Q9UH73 591 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms