RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 WASH6PQ9NQA3 447 aa16.03■□□□□ 0.16
SAMM50-201ENST00000350028 TM7SF3Q9NS93 570 aa16.03■□□□□ 0.16
SAMM50-201ENST00000350028 A0A087WXM4 84 aa16.02■□□□□ 0.16
SAMM50-201ENST00000350028 BMP10O95393 424 aa16.02■□□□□ 0.16
SAMM50-201ENST00000350028 SERPINB1P30740 379 aa16.02■□□□□ 0.16
SAMM50-201ENST00000350028 NTSR1P30989 418 aa16.02■□□□□ 0.16
SAMM50-201ENST00000350028 MAGEA2P43356 314 aa16.02■□□□□ 0.16
SAMM50-201ENST00000350028 CLCNKAP51800 687 aa16.02■□□□□ 0.16
SAMM50-201ENST00000350028 SEC13P55735 322 aa16.02■□□□□ 0.16
SAMM50-201ENST00000350028 C2orf80Q0P641 193 aa16.02■□□□□ 0.16
SAMM50-201ENST00000350028 BIRC2Q13490 618 aa16.02■□□□□ 0.16
SAMM50-201ENST00000350028 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.02■□□□□ 0.16
SAMM50-201ENST00000350028 FAM71E1Q6IPT2 247 aa16.02■□□□□ 0.16
SAMM50-201ENST00000350028 BORAQ6PGQ7 559 aa16.02■□□□□ 0.16
SAMM50-201ENST00000350028 MTSS1LQ765P7 747 aa16.02■□□□□ 0.16
SAMM50-201ENST00000350028 ZNF786Q8N393 782 aa16.02■□□□□ 0.16
SAMM50-201ENST00000350028 SYNPOQ8N3V7 929 aa16.02■□□□□ 0.16
SAMM50-201ENST00000350028 ZNF740Q8NDX6 193 aa16.02■□□□□ 0.16
SAMM50-201ENST00000350028 OR4A15Q8NGL6 344 aa16.02■□□□□ 0.16
SAMM50-201ENST00000350028 ZFP28Q8NHY6 868 aa16.02■□□□□ 0.16
SAMM50-201ENST00000350028 GANCQ8TET4 914 aa16.02■□□□□ 0.16
SAMM50-201ENST00000350028 FAM131CQ96AQ9 280 aa16.02■□□□□ 0.16
SAMM50-201ENST00000350028 TBC1D20Q96BZ9 403 aa16.02■□□□□ 0.16
SAMM50-201ENST00000350028 FBXL20Q96IG2 436 aa16.02■□□□□ 0.16
SAMM50-201ENST00000350028 RBM4BQ9BQ04 359 aaKnown RBP16.02■□□□□ 0.16
SAMM50-201ENST00000350028 TIMM29Q9BSF4 260 aa16.02■□□□□ 0.16
SAMM50-201ENST00000350028 RBM4Q9BWF3 364 aaKnown RBP16.02■□□□□ 0.16
SAMM50-201ENST00000350028 OSBPL10Q9BXB5 764 aa16.02■□□□□ 0.16
SAMM50-201ENST00000350028 C1QTNF7Q9BXJ2 289 aa16.02■□□□□ 0.16
SAMM50-201ENST00000350028 PITHD1Q9GZP4 211 aaPredicted RBP16.02■□□□□ 0.16
SAMM50-201ENST00000350028 FBXL12Q9NXK8 326 aa16.02■□□□□ 0.16
SAMM50-201ENST00000350028 UTS2RQ9UKP6 389 aa16.02■□□□□ 0.16
SAMM50-201ENST00000350028 FZD4Q9ULV1 537 aa16.02■□□□□ 0.16
SAMM50-201ENST00000350028 OR1A2Q9Y585 309 aa16.02■□□□□ 0.16
SAMM50-201ENST00000350028 C5orf42Q9H799 3197 aa16.02■□□□□ 0.16
SAMM50-201ENST00000350028 SPTBN5Q9NRC6 3674 aaKnown RBP16.02■□□□□ 0.16
SAMM50-201ENST00000350028 A0A1B0GTW7 788 aa16.02■□□□□ 0.15
SAMM50-201ENST00000350028 TRIM64A6NGJ6 449 aa16.02■□□□□ 0.15
SAMM50-201ENST00000350028 TRIM64CA6NLI5 447 aa16.02■□□□□ 0.15
SAMM50-201ENST00000350028 PLRG1O43660 514 aaKnown RBP16.02■□□□□ 0.15
SAMM50-201ENST00000350028 GPR37L1O60883 481 aa16.02■□□□□ 0.15
SAMM50-201ENST00000350028 FURINP09958 794 aa16.02■□□□□ 0.15
SAMM50-201ENST00000350028 ALDH3B2P48448 385 aa16.02■□□□□ 0.15
SAMM50-201ENST00000350028 ZNF385BQ569K4 471 aa16.02■□□□□ 0.15
SAMM50-201ENST00000350028 RBM44Q6ZP01 1051 aaKnown RBP16.02■□□□□ 0.15
SAMM50-201ENST00000350028 IKBIPQ70UQ0 350 aa16.02■□□□□ 0.15
SAMM50-201ENST00000350028 EIF3MQ7L2H7 374 aaKnown RBP16.02■□□□□ 0.15
SAMM50-201ENST00000350028 VN1R5Q7Z5H4 357 aa16.02■□□□□ 0.15
SAMM50-201ENST00000350028 HIPK1Q86Z02 1210 aa16.02■□□□□ 0.15
SAMM50-201ENST00000350028 ZDHHC21Q8IVQ6 265 aa16.02■□□□□ 0.15
SAMM50-201ENST00000350028 C2orf73Q8N5S3 287 aaPredicted RBP16.02■□□□□ 0.15
SAMM50-201ENST00000350028 ABHD11Q8NFV4 315 aa16.02■□□□□ 0.15
SAMM50-201ENST00000350028 PPCDCQ96CD2 204 aa16.02■□□□□ 0.15
SAMM50-201ENST00000350028 GABRG3Q99928 467 aa16.02■□□□□ 0.15
SAMM50-201ENST00000350028 CLEC1BQ9P126 229 aa16.02■□□□□ 0.15
SAMM50-201ENST00000350028 TAC3Q9UHF0 121 aa16.02■□□□□ 0.15
SAMM50-201ENST00000350028 COMMD3-BMI1R4GMX3 469 aa16.02■□□□□ 0.15
SAMM50-201ENST00000350028 ANKDD1BA6NHY2 528 aa16.01■□□□□ 0.15
SAMM50-201ENST00000350028 SAP18O00422 153 aaKnown RBP16.01■□□□□ 0.15
SAMM50-201ENST00000350028 KLHL18O94889 574 aa16.01■□□□□ 0.15
SAMM50-201ENST00000350028 OR6B1O95007 311 aa16.01■□□□□ 0.15
SAMM50-201ENST00000350028 SEMA3DO95025 777 aa16.01■□□□□ 0.15
SAMM50-201ENST00000350028 ZNF682O95780 498 aa16.01■□□□□ 0.15
SAMM50-201ENST00000350028 C1QCP02747 245 aa16.01■□□□□ 0.15
SAMM50-201ENST00000350028 DNTTP04053 509 aa16.01■□□□□ 0.15
SAMM50-201ENST00000350028 KLK1P06870 262 aa16.01■□□□□ 0.15
SAMM50-201ENST00000350028 EFNA1P20827 205 aaPredicted RBP16.01■□□□□ 0.15
SAMM50-201ENST00000350028 GSTT1P30711 240 aa16.01■□□□□ 0.15
SAMM50-201ENST00000350028 DCTP40126 519 aa16.01■□□□□ 0.15
SAMM50-201ENST00000350028 CCR8P51685 355 aa16.01■□□□□ 0.15
SAMM50-201ENST00000350028 RGNQ15493 299 aa16.01■□□□□ 0.15
SAMM50-201ENST00000350028 LRRC23Q53EV4 343 aaPredicted RBP16.01■□□□□ 0.15
SAMM50-201ENST00000350028 TTC23Q5W5X9 447 aa16.01■□□□□ 0.15
SAMM50-201ENST00000350028 CBLL1Q75N03 491 aa16.01■□□□□ 0.15
SAMM50-201ENST00000350028 CHST15Q7LFX5 561 aaPredicted RBP16.01■□□□□ 0.15
SAMM50-201ENST00000350028 SLC9B2Q86UD5 537 aa16.01■□□□□ 0.15
SAMM50-201ENST00000350028 PJA1Q8NG27 643 aa16.01■□□□□ 0.15
SAMM50-201ENST00000350028 EZH1Q92800 747 aaPredicted RBP16.01■□□□□ 0.15
SAMM50-201ENST00000350028 KLK6Q92876 244 aa16.01■□□□□ 0.15
SAMM50-201ENST00000350028 FERD3LQ96RJ6 166 aa16.01■□□□□ 0.15
SAMM50-201ENST00000350028 MENTQ9BUN1 341 aa16.01■□□□□ 0.15
SAMM50-201ENST00000350028 ACAT2Q9BWD1 397 aa16.01■□□□□ 0.15
SAMM50-201ENST00000350028 SLC17A9Q9BYT1 436 aa16.01■□□□□ 0.15
SAMM50-201ENST00000350028 CHST8Q9H2A9 424 aa16.01■□□□□ 0.15
SAMM50-201ENST00000350028 IFT80Q9P2H3 777 aaPredicted RBP16.01■□□□□ 0.15
SAMM50-201ENST00000350028 THEGQ9P2T0 379 aa16.01■□□□□ 0.15
SAMM50-201ENST00000350028 WBP11Q9Y2W2 641 aaKnown RBP16.01■□□□□ 0.15
SAMM50-201ENST00000350028 CFAP20Q9Y6A4 193 aaKnown RBP16.01■□□□□ 0.15
SAMM50-201ENST00000350028 A0A1W2PQU0 124 aa16■□□□□ 0.15
SAMM50-201ENST00000350028 RNGTTO60942 597 aaKnown RBP16■□□□□ 0.15
SAMM50-201ENST00000350028 ACP5P13686 325 aa16■□□□□ 0.15
SAMM50-201ENST00000350028 PEX19P40855 299 aa16■□□□□ 0.15
SAMM50-201ENST00000350028 TAS2R50P59544 299 aa16■□□□□ 0.15
SAMM50-201ENST00000350028 PPP2R2BQ00005 443 aa16■□□□□ 0.15
SAMM50-201ENST00000350028 REEP5Q00765 189 aa16■□□□□ 0.15
SAMM50-201ENST00000350028 CTBSQ01459 385 aa16■□□□□ 0.15
SAMM50-201ENST00000350028 MLLT1Q03111 559 aaPredicted RBP16■□□□□ 0.15
SAMM50-201ENST00000350028 SPIDRQ14159 915 aa16■□□□□ 0.15
SAMM50-201ENST00000350028 TMEM259Q4ZIN3 620 aa16■□□□□ 0.15
SAMM50-201ENST00000350028 DEPDC1Q5TB30 811 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms