RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 LRRC66Q68CR7 880 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 MBOAT1Q6ZNC8 495 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 ZNF367Q7RTV3 350 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 DSN1Q9H410 356 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 FAM47E-STBD1D6RA91 191 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 COCHO43405 550 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 CLDN8P56748 225 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 CDK5R2Q13319 367 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 LRRC32Q14392 662 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 HEPACAMQ14CZ8 416 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 RFKQ969G6 155 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 SH3YL1Q96HL8 342 aaPredicted RBP14.26□□□□□ -0.13
NUP50-201ENST00000347635 HSFX1Q9UBD0 423 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 B3GNT3Q9Y2A9 372 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 SPIN1Q9Y657 262 aaPredicted RBP14.26□□□□□ -0.13
NUP50-201ENST00000347635 ARFGEF1Q9Y6D6 1849 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 KRBA1A5PL33 1030 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 ARNTLO00327 626 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 PSIP1O75475 530 aaKnown RBP14.26□□□□□ -0.13
NUP50-201ENST00000347635 RHOP08100 348 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 CRHBPP24387 322 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 STAT5AP42229 794 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 WASP42768 502 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 CDKN1CP49918 316 aaPredicted RBP14.26□□□□□ -0.13
NUP50-201ENST00000347635 BLKP51451 505 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 MCCD1P59942 119 aaPredicted RBP14.26□□□□□ -0.13
NUP50-201ENST00000347635 ILF3Q12906 894 aaKnown RBP eCLIP14.26□□□□□ -0.13
NUP50-201ENST00000347635 C5orf22Q49AR2 442 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 TCEAL8Q8IYN2 117 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 UXS1Q8NBZ7 420 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 GORASP2Q9H8Y8 452 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 GPN2Q9H9Y4 310 aaPredicted RBP14.26□□□□□ -0.13
NUP50-201ENST00000347635 C3orf14Q9HBI5 128 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 HEBP2Q9Y5Z4 205 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 ZNF840PA6NDX5 716 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 VIPP01282 170 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 FYNP06241 537 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 PPP5CP53041 499 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 ST3GAL4Q11206 333 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 SLBPQ14493 270 aaKnown RBP eCLIP14.25□□□□□ -0.13
NUP50-201ENST00000347635 CXorf57Q6NSI4 855 aaKnown RBP14.25□□□□□ -0.13
NUP50-201ENST00000347635 PIWIL3Q7Z3Z3 882 aaKnown RBP14.25□□□□□ -0.13
NUP50-201ENST00000347635 KCTD7Q96MP8 289 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 GTF2A1LQ9UNN4 478 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 PCDHGA8Q9Y5G5 932 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 LOC285095A0A1B0GVY8 99 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 UBFD1O14562 309 aaKnown RBP14.25□□□□□ -0.13
NUP50-201ENST00000347635 TEX28O15482 410 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 PRMT3O60678 531 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 KIAA0319Q5VV43 1072 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 PRSS48Q7RTY5 328 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 PKP4Q99569 1192 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 TAS2R7Q9NYW3 318 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 SPATA7Q9P0W8 599 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 PCDHB14Q9Y5E9 798 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 ZNF780BQ9Y6R6 833 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 ORC5O43913 435 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 GTF2E2P29084 291 aaKnown RBP14.25□□□□□ -0.13
NUP50-201ENST00000347635 PIK3CBP42338 1070 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 MTAPQ13126 283 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 ITPRIPL2Q3MIP1 535 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 RTP2Q5QGT7 225 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 IRAK1BP1Q5VVH5 260 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 TPRG1Q6ZUI0 275 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 TSPYL5Q86VY4 417 aaPredicted RBP14.25□□□□□ -0.13
NUP50-201ENST00000347635 HS3ST5Q8IZT8 346 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 GJD3Q8N144 294 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 LRIG1Q96JA1 1093 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 DOHHQ9BU89 302 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 UCK2Q9BZX2 261 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 PCBD2Q9H0N5 130 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 TRPV5Q9NQA5 729 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 INTS6Q9UL03 887 aaKnown RBP14.25□□□□□ -0.13
NUP50-201ENST00000347635 HCN4Q9Y3Q4 1203 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 MAGED1Q9Y5V3 778 aaPredicted RBP14.25□□□□□ -0.13
NUP50-201ENST00000347635 ISM1B1AKI9 464 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 PSKH1P11801 424 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 TYRP14679 529 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 ZNF630Q2M218 657 aaPredicted RBP14.25□□□□□ -0.13
NUP50-201ENST00000347635 C9orf64Q5T6V5 341 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 HLA-DQA1Q5Y7H0 255 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.25□□□□□ -0.13
NUP50-201ENST00000347635 VN1R5Q7Z5H4 357 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 C3orf58Q8NDZ4 430 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 C17orf50Q8WW18 174 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 ALPK1Q96QP1 1244 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 MGME1Q9BQP7 344 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 EFCAB11Q9BUY7 163 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 TBC1D17Q9HA65 648 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 VAPAQ9P0L0 249 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 COMMD3Q9UBI1 195 aa14.25□□□□□ -0.13
NUP50-201ENST00000347635 PGRMC2O15173 223 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 SLITRK5O94991 958 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 TGFB1P01137 390 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 CD247P20963 164 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 AAK1Q2M2I8 961 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 GTDC1Q4AE62 458 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 IKBIPQ70UQ0 350 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 SLC39A11Q8N1S5 342 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 GFM1Q96RP9 751 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms