RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 PKLRP30613 574 aa15.32■□□□□ 0.04
HMGA1-202ENST00000347617 CA5AP35218 305 aa15.32■□□□□ 0.04
HMGA1-202ENST00000347617 ERVFC1P60507 584 aa15.32■□□□□ 0.04
HMGA1-202ENST00000347617 RPS24P62847 133 aaKnown RBP15.32■□□□□ 0.04
HMGA1-202ENST00000347617 AAK1Q2M2I8 961 aa15.32■□□□□ 0.04
HMGA1-202ENST00000347617 TBRG1Q3YBR2 411 aa15.32■□□□□ 0.04
HMGA1-202ENST00000347617 BCL7AQ4VC05 210 aa15.32■□□□□ 0.04
HMGA1-202ENST00000347617 TRIM69Q86WT6 500 aa15.32■□□□□ 0.04
HMGA1-202ENST00000347617 CIR1Q86X95 450 aaPredicted RBP15.32■□□□□ 0.04
HMGA1-202ENST00000347617 CACTIN-AS1Q8N1I8 211 aa15.32■□□□□ 0.04
HMGA1-202ENST00000347617 ARL14EPQ8N8R7 260 aaPredicted RBP15.32■□□□□ 0.04
HMGA1-202ENST00000347617 JPH3Q8WXH2 748 aaPredicted RBP15.32■□□□□ 0.04
HMGA1-202ENST00000347617 BHMTQ93088 406 aa15.32■□□□□ 0.04
HMGA1-202ENST00000347617 ESAMQ96AP7 390 aa15.32■□□□□ 0.04
HMGA1-202ENST00000347617 MGME1Q9BQP7 344 aa15.32■□□□□ 0.04
HMGA1-202ENST00000347617 CDCA4Q9BXL8 241 aa15.32■□□□□ 0.04
HMGA1-202ENST00000347617 SLC22A4Q9H015 551 aa15.32■□□□□ 0.04
HMGA1-202ENST00000347617 SMURF1Q9HCE7 757 aa15.32■□□□□ 0.04
HMGA1-202ENST00000347617 STMN3Q9NZ72 180 aa15.32■□□□□ 0.04
HMGA1-202ENST00000347617 ZNF490Q9ULM2 529 aaPredicted RBP15.32■□□□□ 0.04
HMGA1-202ENST00000347617 TBC1D24Q9ULP9 559 aa15.32■□□□□ 0.04
HMGA1-202ENST00000347617 POFUT2Q9Y2G5 429 aa15.32■□□□□ 0.04
HMGA1-202ENST00000347617 ALPK3Q96L96 1907 aa15.32■□□□□ 0.04
HMGA1-202ENST00000347617 DENND4CQ5VZ89 1909 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 TRAV19A0A0A6YYK7 116 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 STX7O15400 261 aaKnown RBP15.31■□□□□ 0.04
HMGA1-202ENST00000347617 ARHGEF9O43307 516 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 MPZL2O60487 215 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 PRMT3O60678 531 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 POU2F2P09086 479 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 ANXA8P13928 327 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 CTNNB1P35222 781 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 MLLT3P42568 568 aaPredicted RBP15.31■□□□□ 0.04
HMGA1-202ENST00000347617 P2RX3P56373 397 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 SCN1BQ07699 218 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 GTDC1Q4AE62 458 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 TXNDC8Q6A555 127 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 TIGD3Q6B0B8 471 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 SBSNQ6UWP8 590 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 SPATC1Q76KD6 591 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 OR8H2Q8N162 312 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 C1orf52Q8N6N3 182 aaKnown RBP15.31■□□□□ 0.04
HMGA1-202ENST00000347617 BEND7Q8N7W2 519 aaPredicted RBP15.31■□□□□ 0.04
HMGA1-202ENST00000347617 RNF170Q96K19 258 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 SAMD11Q96NU1 681 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 TRNT1Q96Q11 434 aaKnown RBP15.31■□□□□ 0.04
HMGA1-202ENST00000347617 HHIPQ96QV1 700 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 RPRD1BQ9NQG5 326 aaKnown RBP15.31■□□□□ 0.04
HMGA1-202ENST00000347617 ADPRHL2Q9NX46 363 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 QPCTLQ9NXS2 382 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 UBA2Q9UBT2 640 aaPredicted RBP15.31■□□□□ 0.04
HMGA1-202ENST00000347617 AASSQ9UDR5 926 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 SNX7Q9UNH6 387 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 SNX6Q9UNH7 406 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 SCN8AQ9UQD0 1980 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 MTCL1Q9Y4B5 1905 aaKnown RBP15.31■□□□□ 0.04
HMGA1-202ENST00000347617 OBSL1O75147 1896 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 A0A0D9SEW6 157 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 MEIOCA2RUB1 952 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 A6NL46 340 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 ARHGAP33O14559 1287 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 RFXANKO14593 260 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 KIAA0513O60268 411 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 HNRNPA1P09651 372 aaKnown RBP eCLIP15.31■□□□□ 0.04
HMGA1-202ENST00000347617 PRSS56P0CW18 603 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 MYCLP1P12525 358 aaPredicted RBP15.31■□□□□ 0.04
HMGA1-202ENST00000347617 MZF1P28698 734 aaPredicted RBP15.31■□□□□ 0.04
HMGA1-202ENST00000347617 ERP29P30040 261 aaKnown RBP15.31■□□□□ 0.04
HMGA1-202ENST00000347617 MC4RP32245 332 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 SLC19A1P41440 591 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 CLCN7P51798 805 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 ASAH1Q13510 395 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 CCDC58Q4VC31 144 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 CDKL4Q5MAI5 379 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 LRRC66Q68CR7 880 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 CXorf57Q6NSI4 855 aaKnown RBP15.31■□□□□ 0.04
HMGA1-202ENST00000347617 NEK5Q6P3R8 708 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 SUSD1Q6UWL2 747 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 CERS6Q6ZMG9 384 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 NRARPQ7Z6K4 114 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 GATAD2AQ86YP4 633 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 PLCZ1Q86YW0 608 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 KRTCAP2Q8N6L1 136 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 DCBLD1Q8N8Z6 715 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 POF1BQ8WVV4 589 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 SLC7A6Q92536 515 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 WBP2Q969T9 261 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 HSH2DQ96JZ2 352 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 SLC22A12Q96S37 553 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 CHCHD6Q9BRQ6 235 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 CD244Q9BZW8 370 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 P2RY12Q9H244 342 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 OR51E2Q9H255 320 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 ACOXLQ9NUZ1 547 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 DPP7Q9UHL4 492 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 CORO2BQ9UQ03 480 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 PADI2Q9Y2J8 665 aa15.31■□□□□ 0.04
HMGA1-202ENST00000347617 LINC01553A4QN01 128 aa15.3■□□□□ 0.04
HMGA1-202ENST00000347617 CCRL2O00421 344 aa15.3■□□□□ 0.04
HMGA1-202ENST00000347617 ADAMDEC1O15204 470 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms