RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 TBC1D19Q8N5T2 526 aa18.13■□□□□ 0.49
CHMP4A-201ENST00000347519 KCT2Q8NC54 265 aa18.13■□□□□ 0.49
CHMP4A-201ENST00000347519 NT5CQ8TCD5 201 aa18.13■□□□□ 0.49
CHMP4A-201ENST00000347519 BCAS4Q8TDM0 211 aa18.13■□□□□ 0.49
CHMP4A-201ENST00000347519 SLC13A3Q8WWT9 602 aa18.13■□□□□ 0.49
CHMP4A-201ENST00000347519 TUBGCP3Q96CW5 907 aa18.13■□□□□ 0.49
CHMP4A-201ENST00000347519 THAP11Q96EK4 314 aa18.13■□□□□ 0.49
CHMP4A-201ENST00000347519 APIPQ96GX9 242 aa18.13■□□□□ 0.49
CHMP4A-201ENST00000347519 BRF2Q9HAW0 419 aa18.13■□□□□ 0.49
CHMP4A-201ENST00000347519 PRM3Q9NNZ6 103 aa18.13■□□□□ 0.49
CHMP4A-201ENST00000347519 PCDHGA1Q9Y5H4 931 aa18.13■□□□□ 0.49
CHMP4A-201ENST00000347519 KIF26BQ2KJY2 2108 aa18.13■□□□□ 0.49
CHMP4A-201ENST00000347519 RGS14O43566 566 aa18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 HYAL3O43820 417 aaPredicted RBP18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 EIF2S1P05198 315 aaKnown RBP18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 HSD3B1P14060 373 aa18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 HSD3B2P26439 372 aa18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 SERPINB1P30740 379 aa18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 ARL4DP49703 201 aa18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 E2F1Q01094 437 aa18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 TBL3Q12788 808 aaKnown RBP18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 NR6A1Q15406 480 aa18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 IMPG1Q17R60 797 aa18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 GALNTL6Q49A17 601 aa18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 ZC3H12BQ5HYM0 836 aaKnown RBP18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 TOR1AIP1Q5JTV8 583 aa18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 C10orf62Q5T681 223 aaPredicted RBP18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 DEPDC1Q5TB30 811 aa18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 CDCP2Q5VXM1 449 aa18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 TMEM198Q66K66 360 aa18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 UBE3DQ7Z6J8 389 aa18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 GBP7Q8N8V2 638 aaPredicted RBP18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 TRPV3Q8NET8 790 aa18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 TTLQ8NG68 377 aa18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 WDR48Q8TAF3 677 aa18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 ACTRT2Q8TDY3 377 aa18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 CMTM7Q96FZ5 175 aa18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 ZNF285Q96NJ3 590 aa18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 SIKE1Q9BRV8 207 aa18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 SORBS1Q9BX66 1292 aaKnown RBP18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 MRPL1Q9BYD6 325 aaKnown RBP18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 SLC6A16Q9GZN6 736 aa18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 SPRTNQ9H040 489 aaPredicted RBP18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 ADGRE2Q9UHX3 823 aa18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 PPT2Q9UMR5 302 aa18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 PLCL2Q9UPR0 1127 aa18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 MRPS2Q9Y399 296 aaKnown RBP18.12■□□□□ 0.49
CHMP4A-201ENST00000347519 SCN3AQ9NY46 2000 aa18.11■□□□□ 0.49
CHMP4A-201ENST00000347519 LRIT2A6NDA9 550 aa18.11■□□□□ 0.49
CHMP4A-201ENST00000347519 H3BMH7 237 aa18.11■□□□□ 0.49
CHMP4A-201ENST00000347519 RTCAO00442 366 aaKnown RBP18.11■□□□□ 0.49
CHMP4A-201ENST00000347519 DKK1O94907 266 aa18.11■□□□□ 0.49
CHMP4A-201ENST00000347519 B3GALT4O96024 378 aa18.11■□□□□ 0.49
CHMP4A-201ENST00000347519 CSRP1P21291 193 aaKnown RBP18.11■□□□□ 0.49
CHMP4A-201ENST00000347519 PTX3P26022 381 aaPredicted RBP18.11■□□□□ 0.49
CHMP4A-201ENST00000347519 PHEXP78562 749 aa18.11■□□□□ 0.49
CHMP4A-201ENST00000347519 KIAA0040Q15053 153 aa18.11■□□□□ 0.49
CHMP4A-201ENST00000347519 AP5B1Q2VPB7 878 aa18.11■□□□□ 0.49
CHMP4A-201ENST00000347519 RFTN2Q52LD8 501 aaPredicted RBP18.11■□□□□ 0.49
CHMP4A-201ENST00000347519 SPDYAQ5MJ70 313 aa18.11■□□□□ 0.49
CHMP4A-201ENST00000347519 C6orf136Q5SQH8 315 aa18.11■□□□□ 0.49
CHMP4A-201ENST00000347519 WASHC2DQ5SRD0 308 aa18.11■□□□□ 0.49
CHMP4A-201ENST00000347519 KHDRBS2Q5VWX1 349 aaKnown RBP18.11■□□□□ 0.49
CHMP4A-201ENST00000347519 NXNQ6DKJ4 435 aa18.11■□□□□ 0.49
CHMP4A-201ENST00000347519 RBM44Q6ZP01 1051 aaKnown RBP18.11■□□□□ 0.49
CHMP4A-201ENST00000347519 CSNK1A1LQ8N752 337 aa18.11■□□□□ 0.49
CHMP4A-201ENST00000347519 SERPINI1Q99574 410 aa18.11■□□□□ 0.49
CHMP4A-201ENST00000347519 CCT7Q99832 543 aa18.11■□□□□ 0.49
CHMP4A-201ENST00000347519 CCDC28BQ9BUN5 200 aa18.11■□□□□ 0.49
CHMP4A-201ENST00000347519 LRTM1Q9HBL6 345 aa18.11■□□□□ 0.49
CHMP4A-201ENST00000347519 LHX9Q9NQ69 397 aa18.11■□□□□ 0.49
CHMP4A-201ENST00000347519 TCF7L2Q9NQB0 619 aa18.11■□□□□ 0.49
CHMP4A-201ENST00000347519 OCIAD1Q9NX40 245 aa18.11■□□□□ 0.49
CHMP4A-201ENST00000347519 SIDT1Q9NXL6 827 aaKnown RBP18.11■□□□□ 0.49
CHMP4A-201ENST00000347519 VPS29Q9UBQ0 182 aa18.11■□□□□ 0.49
CHMP4A-201ENST00000347519 APOBEC2Q9Y235 224 aaKnown RBP18.11■□□□□ 0.49
CHMP4A-201ENST00000347519 A0A0G2JN53 185 aa18.1■□□□□ 0.49
CHMP4A-201ENST00000347519 E9PBE3 544 aa18.1■□□□□ 0.49
CHMP4A-201ENST00000347519 NPIPB8E9PQR5 432 aa18.1■□□□□ 0.49
CHMP4A-201ENST00000347519 NDUFAB1O14561 156 aa18.1■□□□□ 0.49
CHMP4A-201ENST00000347519 SLC30A4O14863 429 aa18.1■□□□□ 0.49
CHMP4A-201ENST00000347519 KLHL41O60662 606 aa18.1■□□□□ 0.49
CHMP4A-201ENST00000347519 RSL1D1O76021 490 aaKnown RBP18.1■□□□□ 0.49
CHMP4A-201ENST00000347519 KLHL18O94889 574 aa18.1■□□□□ 0.49
CHMP4A-201ENST00000347519 MED26O95402 600 aa18.1■□□□□ 0.49
CHMP4A-201ENST00000347519 SERPINA6P08185 405 aa18.1■□□□□ 0.49
CHMP4A-201ENST00000347519 ALDOCP09972 364 aaKnown RBP18.1■□□□□ 0.49
CHMP4A-201ENST00000347519 FTH1P19P0C7X4 201 aa18.1■□□□□ 0.49
CHMP4A-201ENST00000347519 PRPH2P23942 346 aa18.1■□□□□ 0.49
CHMP4A-201ENST00000347519 GSTM2P28161 218 aa18.1■□□□□ 0.49
CHMP4A-201ENST00000347519 PWP1Q13610 501 aa18.1■□□□□ 0.49
CHMP4A-201ENST00000347519 PRTGQ2VWP7 1150 aa18.1■□□□□ 0.49
CHMP4A-201ENST00000347519 ADPRMQ3LIE5 342 aa18.1■□□□□ 0.49
CHMP4A-201ENST00000347519 ARHGEF39Q8N4T4 335 aa18.1■□□□□ 0.49
CHMP4A-201ENST00000347519 AMER3Q8N944 861 aa18.1■□□□□ 0.49
CHMP4A-201ENST00000347519 OR1L3Q8NH93 324 aa18.1■□□□□ 0.49
CHMP4A-201ENST00000347519 CHTF18Q8WVB6 975 aa18.1■□□□□ 0.49
CHMP4A-201ENST00000347519 STON2Q8WXE9 905 aa18.1■□□□□ 0.49
CHMP4A-201ENST00000347519 RERGQ96A58 199 aaPredicted RBP18.1■□□□□ 0.49
CHMP4A-201ENST00000347519 MS4A6EQ96DS6 147 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms