RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 NSUN5Q96P11 429 aaKnown RBP11.74□□□□□ -0.53
COL12A1-202ENST00000345356 RANGRFQ9HD47 186 aaPredicted RBP11.74□□□□□ -0.53
COL12A1-202ENST00000345356 TEX13CA0A0J9YWL9 993 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 C7orf72A4D263 438 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 HOXA2O43364 376 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 LDOC1O95751 146 aaPredicted RBP11.74□□□□□ -0.53
COL12A1-202ENST00000345356 BRCC3P46736 316 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 DGKGP49619 791 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 KRBOX4Q5JUW0 171 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 C15orf52Q6ZUT6 534 aaKnown RBP11.74□□□□□ -0.53
COL12A1-202ENST00000345356 PARP16Q8N5Y8 322 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 ZNF676Q8N7Q3 588 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 OR7D4Q8NG98 312 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 DERL2Q9GZP9 239 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 FAM170BA6NMN3 283 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 LOC730098B7Z3J9 87 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 FLRT2O43155 660 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 RGS19P49795 217 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 PRMT2P55345 433 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 USP41Q3LFD5 358 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 PYHIN1Q6K0P9 492 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 CILP2Q8IUL8 1156 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 METTL4Q8N3J2 472 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 OR10H5Q8NGA6 315 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 AKT1S1Q96B36 256 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 TTLL2Q9BWV7 592 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 RGCCQ9H4X1 137 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 AGPAT4Q9NRZ5 378 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 AIG1Q9NVV5 245 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 EVLQ9UI08 416 aaPredicted RBP11.73□□□□□ -0.53
COL12A1-202ENST00000345356 TEX51A0A1B0GUA7 166 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 OR2AG2A6NM03 316 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 ATG13O75143 517 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 CDK14O94921 469 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 ALPPP05187 535 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 RPLP2P05387 115 aaKnown RBP11.73□□□□□ -0.53
COL12A1-202ENST00000345356 SPARCP09486 303 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 HOXC6P09630 235 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 PGAM2P15259 253 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 OXTRP30559 389 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 OR3A3P47888 321 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 OR3A2P47893 321 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 PNLIPRP1P54315 467 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 PRR5P85299 388 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 SIRPB2Q5JXA9 342 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 WASH2PQ6VEQ5 465 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 NTAN1Q96AB6 310 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 NEURL4Q96JN8 1562 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 NIFKQ9BYG3 293 aaKnown RBP11.73□□□□□ -0.53
COL12A1-202ENST00000345356 MROQ9BYG7 248 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 PIGVQ9NUD9 493 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 TTC24A2A3L6 582 aaPredicted RBP11.73□□□□□ -0.53
COL12A1-202ENST00000345356 ELOA3DA6NLF2 546 aaPredicted RBP11.73□□□□□ -0.53
COL12A1-202ENST00000345356 SGCEO43556 437 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 ARHGEF15O94989 841 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 KELP23276 732 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 GDF5P43026 501 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 AGTR2P50052 363 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 PCBP1Q15365 356 aaKnown RBP eCLIP11.73□□□□□ -0.53
COL12A1-202ENST00000345356 SEC23BQ15437 767 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 ELOA3BQ3SY89 546 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 CYP27C1Q4G0S4 372 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 MEDAGQ5VYS4 303 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 FRG2Q64ET8 278 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 ELOA3Q8NG57 546 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 TIFAQ96CG3 184 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 CDKN2AIPNLQ96HQ2 116 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 FRG2BQ96QU4 278 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 ADAM2Q99965 735 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 UQCC2Q9BRT2 126 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 C14orf105Q9NVL8 296 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 RNF181Q9P0P0 153 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 MGAT4BQ9UQ53 548 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 TLR6Q9Y2C9 796 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 ZNF541Q9H0D2 1346 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 TRIM64A6NGJ6 449 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 TRIM64BA6NI03 449 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 CAPN5O15484 640 aaPredicted RBP11.73□□□□□ -0.53
COL12A1-202ENST00000345356 CREBL2O60519 120 aaPredicted RBP11.73□□□□□ -0.53
COL12A1-202ENST00000345356 GGT1P19440 569 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 ALAS2P22557 587 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 CTBP2P56545 445 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 NIPAL4Q0D2K0 466 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 EXOC3L2Q2M3D2 409 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 COL28A1Q2UY09 1125 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 METTL3Q86U44 580 aaKnown RBP11.73□□□□□ -0.53
COL12A1-202ENST00000345356 CASTOR1Q8WTX7 329 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 TCTEX1D2Q8WW35 142 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 ZBED6CLQ96FA7 236 aaPredicted RBP11.73□□□□□ -0.53
COL12A1-202ENST00000345356 OR4K3Q96R72 315 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 BRINP2Q9C0B6 783 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 FAM120CQ9NX05 1096 aaKnown RBP11.73□□□□□ -0.53
COL12A1-202ENST00000345356 LYARQ9NX58 379 aaKnown RBP11.73□□□□□ -0.53
COL12A1-202ENST00000345356 DNMT3AQ9Y6K1 912 aaPredicted RBP11.73□□□□□ -0.53
COL12A1-202ENST00000345356 PROS1P07225 676 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 SLC35G4P0C7Q5 338 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 BMP4P12644 408 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 MAPK9P45984 424 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 DGKZQ13574 1117 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 NDUFA9Q16795 377 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms