RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 IL10P22301 178 aa11.73□□□□□ -0.53
SGCA-202ENST00000344627 COL8A1P27658 744 aa11.73□□□□□ -0.53
SGCA-202ENST00000344627 XCR1P46094 333 aa11.73□□□□□ -0.53
SGCA-202ENST00000344627 AGTR2P50052 363 aa11.73□□□□□ -0.53
SGCA-202ENST00000344627 AP1S2P56377 157 aa11.73□□□□□ -0.53
SGCA-202ENST00000344627 SNRPNP63162 240 aaKnown RBP11.73□□□□□ -0.53
SGCA-202ENST00000344627 ACTN3Q08043 901 aaPredicted RBP11.73□□□□□ -0.53
SGCA-202ENST00000344627 MGAT5Q09328 741 aa11.73□□□□□ -0.53
SGCA-202ENST00000344627 CSHL1Q14406 222 aa11.73□□□□□ -0.53
SGCA-202ENST00000344627 ABHD17BQ5VST6 288 aa11.73□□□□□ -0.53
SGCA-202ENST00000344627 STEAP4Q687X5 459 aa11.73□□□□□ -0.53
SGCA-202ENST00000344627 SP5Q6BEB4 398 aaPredicted RBP11.73□□□□□ -0.53
SGCA-202ENST00000344627 TMEM214Q6NUQ4 689 aaKnown RBP11.73□□□□□ -0.53
SGCA-202ENST00000344627 NIPAL1Q6NVV3 410 aa11.73□□□□□ -0.53
SGCA-202ENST00000344627 TMEM205Q6UW68 189 aa11.73□□□□□ -0.53
SGCA-202ENST00000344627 ARHGEF39Q8N4T4 335 aa11.73□□□□□ -0.53
SGCA-202ENST00000344627 ZNF808Q8N4W9 903 aaPredicted RBP11.73□□□□□ -0.53
SGCA-202ENST00000344627 MFSD9Q8NBP5 474 aa11.73□□□□□ -0.53
SGCA-202ENST00000344627 FBXO36Q8NEA4 188 aa11.73□□□□□ -0.53
SGCA-202ENST00000344627 PSMF1Q92530 271 aa11.73□□□□□ -0.53
SGCA-202ENST00000344627 MARVELD3Q96A59 401 aa11.73□□□□□ -0.53
SGCA-202ENST00000344627 FBXL8Q96CD0 374 aa11.73□□□□□ -0.53
SGCA-202ENST00000344627 TSNARE1Q96NA8 513 aa11.73□□□□□ -0.53
SGCA-202ENST00000344627 CYTH2Q99418 400 aa11.73□□□□□ -0.53
SGCA-202ENST00000344627 RBCK1Q9BYM8 510 aa11.73□□□□□ -0.53
SGCA-202ENST00000344627 VN1R1Q9GZP7 353 aa11.73□□□□□ -0.53
SGCA-202ENST00000344627 PLAC1Q9HBJ0 212 aa11.73□□□□□ -0.53
SGCA-202ENST00000344627 PYCARDQ9ULZ3 195 aa11.73□□□□□ -0.53
SGCA-202ENST00000344627 NAALAD2Q9Y3Q0 740 aa11.73□□□□□ -0.53
SGCA-202ENST00000344627 DYRK1BQ9Y463 629 aa11.73□□□□□ -0.53
SGCA-202ENST00000344627 POLEQ07864 2286 aa11.72□□□□□ -0.53
SGCA-202ENST00000344627 FAM95CA0A1B0GW59 222 aa11.72□□□□□ -0.53
SGCA-202ENST00000344627 OR5H15A6NDH6 313 aa11.72□□□□□ -0.53
SGCA-202ENST00000344627 OR2W5A6NFC9 320 aa11.72□□□□□ -0.53
SGCA-202ENST00000344627 ZNF860A6NHJ4 632 aa11.72□□□□□ -0.53
SGCA-202ENST00000344627 NDC80O14777 642 aa11.72□□□□□ -0.53
SGCA-202ENST00000344627 CDC123O75794 336 aaPredicted RBP11.72□□□□□ -0.53
SGCA-202ENST00000344627 TSPAN12O95859 305 aa11.72□□□□□ -0.53
SGCA-202ENST00000344627 ITGAMP11215 1152 aa11.72□□□□□ -0.53
SGCA-202ENST00000344627 RPL21P46778 160 aaKnown RBP11.72□□□□□ -0.53
SGCA-202ENST00000344627 TDGF1P3P51864 188 aa11.72□□□□□ -0.53
SGCA-202ENST00000344627 SLC12A2P55011 1212 aa11.72□□□□□ -0.53
SGCA-202ENST00000344627 ZNF33BQ06732 778 aa11.72□□□□□ -0.53
SGCA-202ENST00000344627 RGS1Q08116 209 aa11.72□□□□□ -0.53
SGCA-202ENST00000344627 ZNF460Q14592 562 aa11.72□□□□□ -0.53
SGCA-202ENST00000344627 FASTKD3Q14CZ7 662 aaKnown RBP11.72□□□□□ -0.53
SGCA-202ENST00000344627 PCOLCEQ15113 449 aa11.72□□□□□ -0.53
SGCA-202ENST00000344627 RBBP5Q15291 538 aaKnown RBP11.72□□□□□ -0.53
SGCA-202ENST00000344627 BTBD16Q32M84 506 aa11.72□□□□□ -0.53
SGCA-202ENST00000344627 CATSPEREQ5SY80 951 aa11.72□□□□□ -0.53
SGCA-202ENST00000344627 XKRXQ6PP77 449 aa11.72□□□□□ -0.53
SGCA-202ENST00000344627 TMEM207Q6UWW9 146 aa11.72□□□□□ -0.53
SGCA-202ENST00000344627 LANCL3Q6ZV70 420 aa11.72□□□□□ -0.53
SGCA-202ENST00000344627 CPEB2Q7Z5Q1 589 aaKnown RBP11.72□□□□□ -0.53
SGCA-202ENST00000344627 ZBED8Q8IZ13 594 aa11.72□□□□□ -0.53
SGCA-202ENST00000344627 OR56A3Q8NH54 315 aa11.72□□□□□ -0.53
SGCA-202ENST00000344627 PEX11GQ96HA9 241 aa11.72□□□□□ -0.53
SGCA-202ENST00000344627 ZNF354BQ96LW1 612 aa11.72□□□□□ -0.53
SGCA-202ENST00000344627 EGFL8Q99944 293 aa11.72□□□□□ -0.53
SGCA-202ENST00000344627 WDR83Q9BRX9 315 aaKnown RBP11.72□□□□□ -0.53
SGCA-202ENST00000344627 DPH5Q9H2P9 285 aa11.72□□□□□ -0.53
SGCA-202ENST00000344627 RNF14Q9UBS8 474 aa11.72□□□□□ -0.53
SGCA-202ENST00000344627 PSAT1Q9Y617 370 aa11.72□□□□□ -0.53
SGCA-202ENST00000344627 TRBC2A0A5B9 178 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 NPEPPSL1A6NEC2 478 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 PRSS44E7EML9 344 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 CDC7O00311 574 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 PRAMEF2O60811 474 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 ENO2P09104 434 aaPredicted RBP11.71□□□□□ -0.53
SGCA-202ENST00000344627 HNF4AP41235 474 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 SKP1P63208 163 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 CALCOCO2Q13137 446 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 HERC3Q15034 1050 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 EXT1Q16394 746 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 KRTCAP3Q53RY4 240 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 PLAG1Q6DJT9 500 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 GFRALQ6UXV0 394 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 FRA10AC1Q70Z53 315 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 TMPRSS11BQ86T26 416 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 THOC6Q86W42 341 aaKnown RBP11.71□□□□□ -0.53
SGCA-202ENST00000344627 ZC3HC1Q86WB0 502 aaKnown RBP11.71□□□□□ -0.53
SGCA-202ENST00000344627 SHISA5Q8N114 240 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 EID3Q8N140 333 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 NKAPQ8N5F7 415 aaKnown RBP11.71□□□□□ -0.53
SGCA-202ENST00000344627 HORMAD2Q8N7B1 307 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 AMER2Q8N7J2 671 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 BBOF1Q8ND07 529 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 ZNF740Q8NDX6 193 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 ABHD11Q8NFV4 315 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 PYROXD1Q8WU10 500 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 SLC5A11Q8WWX8 675 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 NEIL2Q969S2 332 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 TM4SF19Q96DZ7 209 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 VPS39Q96JC1 886 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 OR4K3Q96R72 315 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 KCNK13Q9HB14 408 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 PRM3Q9NNZ6 103 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 SAYSD1Q9NPB0 183 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 STMN3Q9NZ72 180 aa11.71□□□□□ -0.53
SGCA-202ENST00000344627 TXNDC16Q9P2K2 825 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms