RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 LILRB4Q8NHJ6 448 aa10.55□□□□□ -0.72
RPL28-201ENST00000344063 JPH3Q8WXH2 748 aaPredicted RBP10.55□□□□□ -0.72
RPL28-201ENST00000344063 NT5C3BQ969T7 300 aa10.55□□□□□ -0.72
RPL28-201ENST00000344063 EFHD2Q96C19 240 aaPredicted RBP10.55□□□□□ -0.72
RPL28-201ENST00000344063 SLITRK2Q9H156 845 aa10.55□□□□□ -0.72
RPL28-201ENST00000344063 MS4A12Q9NXJ0 267 aa10.55□□□□□ -0.72
RPL28-201ENST00000344063 PFDN2Q9UHV9 154 aa10.55□□□□□ -0.72
RPL28-201ENST00000344063 RPL36Q9Y3U8 105 aaKnown RBP10.55□□□□□ -0.72
RPL28-201ENST00000344063 UGT2A1Q9Y4X1 527 aa10.55□□□□□ -0.72
RPL28-201ENST00000344063 USP3Q9Y6I4 520 aa10.55□□□□□ -0.72
RPL28-201ENST00000344063 TRAV6A0A075B6T7 132 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 GGT1P19440 569 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 CSTF2P33240 577 aaKnown RBP eCLIP10.54□□□□□ -0.72
RPL28-201ENST00000344063 STARP49675 285 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 MAZP56270 477 aaKnown RBP10.54□□□□□ -0.72
RPL28-201ENST00000344063 HSF2Q03933 536 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 PUDPQ08623 228 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 HNRNPA0Q13151 305 aaKnown RBP10.54□□□□□ -0.72
RPL28-201ENST00000344063 NFATC2Q13469 925 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 SMN1Q16637 294 aaKnown RBP10.54□□□□□ -0.72
RPL28-201ENST00000344063 C9orf64Q5T6V5 341 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 DPY19L3Q6ZPD9 716 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 SCD5Q86SK9 330 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 OR5AK3PQ8NH89 298 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 ZNF431Q8TF32 576 aaPredicted RBP10.54□□□□□ -0.72
RPL28-201ENST00000344063 EXOSC8Q96B26 276 aaKnown RBP10.54□□□□□ -0.72
RPL28-201ENST00000344063 MAGIXQ9H6Y5 334 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 ITM2BQ9Y287 266 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 PCDHGB6Q9Y5F9 930 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 ZNF780BQ9Y6R6 833 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 ISM1B1AKI9 464 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 CA12O43570 354 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 ADAM23O75077 832 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 OAZ2O95190 189 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 ADH1CP00326 375 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 PRSS56P0CW18 603 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 BCKDHAP12694 445 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 ATP1B2P14415 290 aaPredicted RBP10.54□□□□□ -0.72
RPL28-201ENST00000344063 CRHBPP24387 322 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 SLC11A1P49279 550 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 EMX1Q04741 257 aaPredicted RBP10.54□□□□□ -0.72
RPL28-201ENST00000344063 PRKCZQ05513 592 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 CDK5R2Q13319 367 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 NDUFAF6Q330K2 333 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 ATP13A5Q4VNC0 1218 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 CES4AQ5XG92 561 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 PAQR9Q6ZVX9 377 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 IKBIPQ70UQ0 350 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 MRPL10Q7Z7H8 261 aaKnown RBP10.54□□□□□ -0.72
RPL28-201ENST00000344063 ALDH16A1Q8IZ83 802 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 NATD1Q8N6N6 113 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 SRFBP1Q8NEF9 429 aaKnown RBP10.54□□□□□ -0.72
RPL28-201ENST00000344063 SLC35A5Q9BS91 424 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 IFT52Q9Y366 437 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 TCF3P15923 654 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 STAT5AP42229 794 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 HSF5Q4G112 596 aaPredicted RBP10.54□□□□□ -0.72
RPL28-201ENST00000344063 CXXC5Q7LFL8 322 aaKnown RBP10.54□□□□□ -0.72
RPL28-201ENST00000344063 VTCN1Q7Z7D3 282 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 LRRTM3Q86VH5 581 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 NPAS3Q8IXF0 933 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 SLC43A3Q8NBI5 491 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 ZNF514Q96K75 400 aaPredicted RBP10.54□□□□□ -0.72
RPL28-201ENST00000344063 POLR2J3Q9H1A7 115 aaKnown RBP10.54□□□□□ -0.72
RPL28-201ENST00000344063 SYNDIG1Q9H7V2 258 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 GPR83Q9NYM4 423 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 COL16A1Q07092 1604 aaPredicted RBP10.54□□□□□ -0.72
RPL28-201ENST00000344063 IQCMA0A1B0GVH7 501 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 URADA6NGE7 173 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 TOXO94900 526 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 MAGEA12P43365 314 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 ARCN1P48444 511 aaKnown RBP10.54□□□□□ -0.72
RPL28-201ENST00000344063 HTR6P50406 440 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 SKP1P63208 163 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 CD300CQ08708 224 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 RCAN2Q14206 197 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 CYBRD1Q53TN4 286 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 ZNF730Q6ZMV8 503 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 SH2D5Q6ZV89 423 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 LSMEM2Q8N112 164 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 FAM110BQ8TC76 370 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 AKAP1Q92667 903 aaKnown RBP eCLIP10.54□□□□□ -0.723e-7■■■□□ 16.9
RPL28-201ENST00000344063 ZBED6CLQ96FA7 236 aaPredicted RBP10.54□□□□□ -0.72
RPL28-201ENST00000344063 MAPKAP1Q9BPZ7 522 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 MAT2BQ9NZL9 334 aa10.54□□□□□ -0.72
RPL28-201ENST00000344063 M0R129 80 aa10.53□□□□□ -0.72
RPL28-201ENST00000344063 SAP18O00422 153 aaKnown RBP10.53□□□□□ -0.72
RPL28-201ENST00000344063 RPS17P08708 135 aaKnown RBP10.53□□□□□ -0.72
RPL28-201ENST00000344063 UQCRC1P31930 480 aa10.53□□□□□ -0.72
RPL28-201ENST00000344063 ARRB2P32121 409 aa10.53□□□□□ -0.72
RPL28-201ENST00000344063 IDUAP35475 653 aa10.53□□□□□ -0.72
RPL28-201ENST00000344063 TARDBPQ13148 414 aaKnown RBP eCLIP10.53□□□□□ -0.72
RPL28-201ENST00000344063 ABRAXAS2Q15018 415 aa10.53□□□□□ -0.72
RPL28-201ENST00000344063 TNFAIP8L2Q6P589 184 aaPredicted RBP10.53□□□□□ -0.72
RPL28-201ENST00000344063 BRAT1Q6PJG6 821 aa10.53□□□□□ -0.72
RPL28-201ENST00000344063 ALKAL1Q6UXT8 129 aa10.53□□□□□ -0.72
RPL28-201ENST00000344063 GDPD4Q6W3E5 623 aa10.53□□□□□ -0.72
RPL28-201ENST00000344063 RD3Q7Z3Z2 195 aa10.53□□□□□ -0.72
RPL28-201ENST00000344063 THOC6Q86W42 341 aaKnown RBP10.53□□□□□ -0.72
RPL28-201ENST00000344063 IFNL1Q8IU54 200 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms