RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 IP6K3Q96PC2 410 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 SMAD5Q99717 465 aaKnown RBP17.11■□□□□ 0.33
USF2-202ENST00000343550 MFRPQ9BY79 579 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 SPNS1Q9H2V7 528 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 ZNF304Q9HCX3 659 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 DNAJC11Q9NVH1 559 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.11■□□□□ 0.33
USF2-202ENST00000343550 ASB1Q9Y576 335 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 MAU2Q9Y6X3 613 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 V9GYY5 206 aaPredicted RBP17.11■□□□□ 0.33
USF2-202ENST00000343550 CCDC88CQ9P219 2028 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 FOXS1O43638 330 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 ALBP02768 609 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 SHBGP04278 402 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 SNRPNP63162 240 aaKnown RBP17.11■□□□□ 0.33
USF2-202ENST00000343550 RAPSNQ13702 412 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 FAM53BQ14153 422 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 ERCC6LQ2NKX8 1250 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 FHL5Q5TD97 284 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 COX15Q7KZN9 410 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 MRGPREQ86SM8 312 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 TMPRSS11BQ86T26 416 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 RBMXL3Q8N7X1 1067 aaKnown RBP17.11■□□□□ 0.33
USF2-202ENST00000343550 Q8NA96 180 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 CAMKVQ8NCB2 501 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 MVB12AQ96EY5 273 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 AIF1LQ9BQI0 150 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 SLAMF7Q9NQ25 335 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 GPRC5BQ9NZH0 403 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 LUZP4Q9P127 313 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 CDC14AQ9UNH5 594 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 PTRH2Q9Y3E5 179 aaKnown RBP17.11■□□□□ 0.33
USF2-202ENST00000343550 KLK8O60259 260 aa17.1■□□□□ 0.33
USF2-202ENST00000343550 CCNT2O60583 730 aaKnown RBP17.1■□□□□ 0.33
USF2-202ENST00000343550 H2AFYO75367 372 aaKnown RBP17.1■□□□□ 0.33
USF2-202ENST00000343550 VARSP26640 1264 aaKnown RBP17.1■□□□□ 0.33
USF2-202ENST00000343550 FOLR3P41439 243 aa17.1■□□□□ 0.33
USF2-202ENST00000343550 SCTRP47872 440 aa17.1■□□□□ 0.33
USF2-202ENST00000343550 AGTR2P50052 363 aa17.1■□□□□ 0.33
USF2-202ENST00000343550 ATG9BQ674R7 924 aa17.1■□□□□ 0.33
USF2-202ENST00000343550 SLC6A19Q695T7 634 aa17.1■□□□□ 0.33
USF2-202ENST00000343550 ASPGQ86U10 573 aa17.1■□□□□ 0.33
USF2-202ENST00000343550 TMEM151BQ8IW70 566 aa17.1■□□□□ 0.33
USF2-202ENST00000343550 TBC1D19Q8N5T2 526 aa17.1■□□□□ 0.33
USF2-202ENST00000343550 KCT2Q8NC54 265 aa17.1■□□□□ 0.33
USF2-202ENST00000343550 PNPLA2Q96AD5 504 aa17.1■□□□□ 0.33
USF2-202ENST00000343550 FKBP10Q96AY3 582 aa17.1■□□□□ 0.33
USF2-202ENST00000343550 MOCOSQ96EN8 888 aa17.1■□□□□ 0.33
USF2-202ENST00000343550 FER1L6-AS2Q96M78 137 aa17.1■□□□□ 0.33
USF2-202ENST00000343550 SLC26A1Q9H2B4 701 aa17.1■□□□□ 0.33
USF2-202ENST00000343550 MRPS2Q9Y399 296 aaKnown RBP17.1■□□□□ 0.33
USF2-202ENST00000343550 USP9YO00507 2555 aaPredicted RBP17.09■□□□□ 0.33
USF2-202ENST00000343550 IQANK1A0A1B0GTG1 560 aa17.09■□□□□ 0.33
USF2-202ENST00000343550 PEX12O00623 359 aa17.09■□□□□ 0.33
USF2-202ENST00000343550 PRAMEF4O60810 478 aa17.09■□□□□ 0.33
USF2-202ENST00000343550 AGFG2O95081 481 aa17.09■□□□□ 0.33
USF2-202ENST00000343550 RBP1P09455 135 aa17.09■□□□□ 0.33
USF2-202ENST00000343550 DEKP35659 375 aaKnown RBP17.09■□□□□ 0.33
USF2-202ENST00000343550 AHRP35869 848 aa17.09■□□□□ 0.33
USF2-202ENST00000343550 FOXL2P58012 376 aa17.09■□□□□ 0.33
USF2-202ENST00000343550 REEP5Q00765 189 aa17.09■□□□□ 0.33
USF2-202ENST00000343550 PWP1Q13610 501 aa17.09■□□□□ 0.33
USF2-202ENST00000343550 NKG7Q16617 165 aa17.09■□□□□ 0.33
USF2-202ENST00000343550 NDUFA9Q16795 377 aa17.09■□□□□ 0.33
USF2-202ENST00000343550 PFKFB4Q16877 469 aa17.09■□□□□ 0.33
USF2-202ENST00000343550 TSNAXIP1Q2TAA8 658 aa17.09■□□□□ 0.33
USF2-202ENST00000343550 PRR30Q53SZ7 412 aaPredicted RBP17.09■□□□□ 0.33
USF2-202ENST00000343550 TECRLQ5HYJ1 363 aa17.09■□□□□ 0.33
USF2-202ENST00000343550 PRAMEF9Q5VWM5 478 aa17.09■□□□□ 0.33
USF2-202ENST00000343550 TMEM214Q6NUQ4 689 aaKnown RBP17.09■□□□□ 0.33
USF2-202ENST00000343550 ANKRD53Q8N9V6 530 aa17.09■□□□□ 0.33
USF2-202ENST00000343550 OR2Y1Q8NGV0 311 aa17.09■□□□□ 0.33
USF2-202ENST00000343550 DRC3Q9H069 523 aa17.09■□□□□ 0.33
USF2-202ENST00000343550 C5AR2Q9P296 337 aa17.09■□□□□ 0.33
USF2-202ENST00000343550 PSMC3IPQ9P2W1 217 aaPredicted RBP17.09■□□□□ 0.33
USF2-202ENST00000343550 TBK1Q9UHD2 729 aa17.09■□□□□ 0.33
USF2-202ENST00000343550 ZFP69BQ9UJL9 534 aa17.09■□□□□ 0.33
USF2-202ENST00000343550 USP9XQ93008 2570 aaPredicted RBP17.09■□□□□ 0.33
USF2-202ENST00000343550 PCSK5Q92824 1860 aa17.08■□□□□ 0.33
USF2-202ENST00000343550 A0A0A6YYC8 382 aaPredicted RBP17.08■□□□□ 0.32
USF2-202ENST00000343550 I3L1I5 382 aaPredicted RBP17.08■□□□□ 0.32
USF2-202ENST00000343550 CLGNO14967 610 aa17.08■□□□□ 0.32
USF2-202ENST00000343550 EPORP19235 508 aa17.08■□□□□ 0.32
USF2-202ENST00000343550 CXCR2P25025 360 aa17.08■□□□□ 0.32
USF2-202ENST00000343550 HSD17B3P37058 310 aa17.08■□□□□ 0.32
USF2-202ENST00000343550 ALDH18A1P54886 795 aaKnown RBP17.08■□□□□ 0.32
USF2-202ENST00000343550 RBBP5Q15291 538 aaKnown RBP17.08■□□□□ 0.32
USF2-202ENST00000343550 PDK4Q16654 411 aa17.08■□□□□ 0.32
USF2-202ENST00000343550 DCAF10Q5QP82 559 aa17.08■□□□□ 0.32
USF2-202ENST00000343550 VWA5B1Q5TIE3 1220 aa17.08■□□□□ 0.32
USF2-202ENST00000343550 CNPY4Q8N129 248 aa17.08■□□□□ 0.32
USF2-202ENST00000343550 TMEM151AQ8N4L1 468 aa17.08■□□□□ 0.32
USF2-202ENST00000343550 SNX31Q8N9S9 440 aa17.08■□□□□ 0.32
USF2-202ENST00000343550 CLEC1AQ8NC01 280 aa17.08■□□□□ 0.32
USF2-202ENST00000343550 AENQ8WTP8 325 aaKnown RBP17.08■□□□□ 0.32
USF2-202ENST00000343550 MZB1Q8WU39 189 aa17.08■□□□□ 0.32
USF2-202ENST00000343550 UBTD2Q8WUN7 234 aa17.08■□□□□ 0.32
USF2-202ENST00000343550 MMABQ96EY8 250 aaPredicted RBP17.08■□□□□ 0.32
USF2-202ENST00000343550 PARD6BQ9BYG5 372 aa17.08■□□□□ 0.32
USF2-202ENST00000343550 EHD1Q9H4M9 534 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms