RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 FLRT1Q9NZU1 646 aa6□□□□□ -1.45
VCAN-203ENST00000343200 FBXL4Q9UKA2 621 aa6□□□□□ -1.45
VCAN-203ENST00000343200 ZNF646O15015 1829 aaPredicted RBP6□□□□□ -1.45
VCAN-203ENST00000343200 DSCAMO60469 2012 aa6□□□□□ -1.45
VCAN-203ENST00000343200 CNTNAP2Q9UHC6 1331 aa6□□□□□ -1.45
VCAN-203ENST00000343200 A0A1W2PS29 197 aa6□□□□□ -1.45
VCAN-203ENST00000343200 LYPLA1O75608 230 aaPredicted RBP6□□□□□ -1.45
VCAN-203ENST00000343200 SULT1C4O75897 302 aa6□□□□□ -1.45
VCAN-203ENST00000343200 ACADMP11310 421 aa6□□□□□ -1.45
VCAN-203ENST00000343200 AOC1P19801 751 aa6□□□□□ -1.45
VCAN-203ENST00000343200 CHRNA4P43681 627 aa6□□□□□ -1.45
VCAN-203ENST00000343200 IDH3AP50213 366 aa6□□□□□ -1.45
VCAN-203ENST00000343200 TPMTP51580 245 aa6□□□□□ -1.45
VCAN-203ENST00000343200 GPX6P59796 221 aa6□□□□□ -1.45
VCAN-203ENST00000343200 DUSP6Q16828 381 aa6□□□□□ -1.45
VCAN-203ENST00000343200 RALGPS1Q5JS13 557 aa6□□□□□ -1.45
VCAN-203ENST00000343200 IL23RQ5VWK5 629 aa6□□□□□ -1.45
VCAN-203ENST00000343200 UGT2A3Q6UWM9 527 aa6□□□□□ -1.45
VCAN-203ENST00000343200 VWA5B2Q8N398 1253 aa6□□□□□ -1.45
VCAN-203ENST00000343200 FBXO32Q969P5 355 aa6□□□□□ -1.45
VCAN-203ENST00000343200 BTBD1Q9H0C5 482 aa6□□□□□ -1.45
VCAN-203ENST00000343200 NTN4Q9HB63 628 aa6□□□□□ -1.45
VCAN-203ENST00000343200 ZNF490Q9ULM2 529 aaPredicted RBP6□□□□□ -1.45
VCAN-203ENST00000343200 PCDHGA1Q9Y5H4 931 aa6□□□□□ -1.45
VCAN-203ENST00000343200 DLC1Q96QB1 1528 aa6□□□□□ -1.45
VCAN-203ENST00000343200 C5P01031 1676 aa6□□□□□ -1.45
VCAN-203ENST00000343200 A0A087WZY1 265 aa6□□□□□ -1.45
VCAN-203ENST00000343200 RFXAPO00287 272 aa6□□□□□ -1.45
VCAN-203ENST00000343200 CYP1A2P05177 515 aa6□□□□□ -1.45
VCAN-203ENST00000343200 FDX1P10109 184 aa6□□□□□ -1.45
VCAN-203ENST00000343200 RPS3AP61247 264 aaKnown RBP6□□□□□ -1.45
VCAN-203ENST00000343200 CD47Q08722 323 aa6□□□□□ -1.45
VCAN-203ENST00000343200 GRIK2Q13002 908 aa6□□□□□ -1.45
VCAN-203ENST00000343200 TATDN3Q17R31 274 aa6□□□□□ -1.45
VCAN-203ENST00000343200 XKR3Q5GH77 459 aa6□□□□□ -1.45
VCAN-203ENST00000343200 CRB2Q5IJ48 1285 aa6□□□□□ -1.45
VCAN-203ENST00000343200 HS3ST5Q8IZT8 346 aa6□□□□□ -1.45
VCAN-203ENST00000343200 CRYBG2Q8N1P7 616 aa6□□□□□ -1.45
VCAN-203ENST00000343200 UBA3Q8TBC4 463 aa6□□□□□ -1.45
VCAN-203ENST00000343200 ABCG5Q9H222 651 aa6□□□□□ -1.45
VCAN-203ENST00000343200 ZBTB26Q9HCK0 441 aa6□□□□□ -1.45
VCAN-203ENST00000343200 BTRCQ9Y297 605 aa6□□□□□ -1.45
VCAN-203ENST00000343200 NUP188Q5SRE5 1749 aa6□□□□□ -1.45
VCAN-203ENST00000343200 ARAP2Q8WZ64 1704 aa6□□□□□ -1.45
VCAN-203ENST00000343200 GRIN2DO15399 1336 aa6□□□□□ -1.45
VCAN-203ENST00000343200 CARNS1A5YM72 827 aa6□□□□□ -1.45
VCAN-203ENST00000343200 KCNK2O95069 426 aa6□□□□□ -1.45
VCAN-203ENST00000343200 STAG3L2P0CL84 134 aa6□□□□□ -1.45
VCAN-203ENST00000343200 FGFR1P11362 822 aa6□□□□□ -1.45
VCAN-203ENST00000343200 SNCAP37840 140 aa6□□□□□ -1.45
VCAN-203ENST00000343200 BAG6P46379 1132 aa6□□□□□ -1.45
VCAN-203ENST00000343200 TBX4P57082 545 aa6□□□□□ -1.45
VCAN-203ENST00000343200 RHOAP61586 193 aa6□□□□□ -1.45
VCAN-203ENST00000343200 SERINC3Q13530 473 aa6□□□□□ -1.45
VCAN-203ENST00000343200 GRIN2CQ14957 1233 aa6□□□□□ -1.45
VCAN-203ENST00000343200 CES3Q6UWW8 571 aa6□□□□□ -1.45
VCAN-203ENST00000343200 CMIPQ8IY22 773 aa6□□□□□ -1.45
VCAN-203ENST00000343200 NSMAFQ92636 917 aa6□□□□□ -1.45
VCAN-203ENST00000343200 ELMOD3Q96FG2 381 aa6□□□□□ -1.45
VCAN-203ENST00000343200 BSCL2Q96G97 398 aaPredicted RBP6□□□□□ -1.45
VCAN-203ENST00000343200 RNF157Q96PX1 679 aa6□□□□□ -1.45
VCAN-203ENST00000343200 PRDM9Q9NQV7 894 aa6□□□□□ -1.45
VCAN-203ENST00000343200 KIF25Q9UIL4 384 aa6□□□□□ -1.45
VCAN-203ENST00000343200 FLVCR2Q9UPI3 526 aa6□□□□□ -1.45
VCAN-203ENST00000343200 WASF3Q9UPY6 502 aa6□□□□□ -1.45
VCAN-203ENST00000343200 NOTCH4Q99466 2003 aa6□□□□□ -1.45
VCAN-203ENST00000343200 RETP07949 1114 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 CD86P42081 329 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 BIDP55957 195 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 SLC17A1Q14916 467 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 ZNF169Q14929 603 aaPredicted RBP5.99□□□□□ -1.45
VCAN-203ENST00000343200 DNM1P34Q6PK57 102 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 TM9SF4Q92544 642 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 LPGAT1Q92604 370 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 PMM1Q92871 262 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 CDK15Q96Q40 435 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 HIST1H2AAQ96QV6 131 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 CPXM1Q96SM3 734 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 OR51J1Q9H342 316 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 TIGARQ9NQ88 270 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 ZNF510Q9Y2H8 683 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 PCDHA2Q9Y5H9 948 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 ALPK3Q96L96 1907 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 GGT3PA6NGU5 568 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 GPR89AB7ZAQ6 455 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 SH3BGRLO75368 114 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 CLDN9O95484 217 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 HPRP00739 348 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 CHRNA1P02708 482 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 ITGA5P08648 1049 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 GPR89BP0CG08 455 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 CD34P28906 385 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 GGT2P36268 569 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 MAPK8P45983 427 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 MTMR2Q13614 643 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 CHSY3Q70JA7 882 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 ZNF676Q8N7Q3 588 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 OR4C15Q8NGM1 316 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 TLCD1Q96CP7 247 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 FAM84BQ96KN1 310 aaPredicted RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms