RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 C8orf82Q6P1X6 216 aaPredicted RBP9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 RNF130Q86XS8 419 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 KRT78Q8N1N4 520 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 ZUFSPQ96AP4 578 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 SLC35A5Q9BS91 424 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 IRAK4Q9NWZ3 460 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 SMPD3Q9NY59 655 aaPredicted RBP9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 CYP8B1Q9UNU6 501 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 MYRFQ9Y2G1 1151 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 PCDHB3Q9Y5E6 796 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 C2orf16Q68DN1 1984 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 NARSO43776 548 aaKnown RBP9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 RAP2AP10114 183 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 FCGR1AP12314 374 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 CTHP32929 405 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 HSPA13P48723 471 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 PHEXP78562 749 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 RUNDC3AQ59EK9 446 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 COX20Q5RI15 118 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 PDZD3Q86UT5 571 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 NAGSQ8N159 534 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 FAM160A2Q8N612 972 aaPredicted RBP9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 RNF217Q8TC41 542 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 UCN3Q969E3 161 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 REPS1Q96D71 796 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 ZNF514Q96K75 400 aaPredicted RBP9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 DMRT3Q9NQL9 472 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 RASSF1Q9NS23 344 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 ORC6Q9Y5N6 252 aa9.77□□□□□ -0.85
RBFOX1-202ENST00000340209 TSPAN11A1L157 253 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 PSMD11O00231 422 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 ERN1O75460 977 aaKnown RBP9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 IDSP22304 550 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 MANFP55145 182 aaKnown RBP9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 IL5RAQ01344 420 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 GANABQ14697 944 aaKnown RBP9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 CCDC81Q6ZN84 652 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 PLPP6Q8IY26 295 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 DPP10Q8N608 796 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 KCNH6Q9H252 994 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 KAT8Q9H7Z6 458 aaKnown RBP9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 ITM2CQ9NQX7 267 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 NCKAP1Q9Y2A7 1128 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 SAMHD1Q9Y3Z3 626 aaKnown RBP9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 CCDC88CQ9P219 2028 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 ARHGEF17Q96PE2 2063 aaPredicted RBP9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 A6NHS1 94 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 NPC1O15118 1278 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 SCAMP2O15127 329 aaKnown RBP9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 NDUFS4O43181 175 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 TPST2O60704 377 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 POU1F1P28069 291 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 HBA1P69905 142 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 ZNF763Q0D2J5 394 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 GRIK2Q13002 908 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 LRRC32Q14392 662 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 Q6ZS52 159 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 RAB42Q8N4Z0 105 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 IL17RCQ8NAC3 791 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 OR56A3Q8NH54 315 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 NFKBIDQ8NI38 313 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 VANGL1Q8TAA9 524 aaPredicted RBP9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 WDR20Q8TBZ3 569 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 EZH1Q92800 747 aaPredicted RBP9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 CXorf40BQ96DE9 158 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 HSH2DQ96JZ2 352 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 AIF1LQ9BQI0 150 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 EFCAB11Q9BUY7 163 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 MIR1-1HGQ9H1L0 117 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 ZNF576Q9H609 170 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 ANKRA2Q9H9E1 313 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 CLEC1BQ9P126 229 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 WARS2Q9UGM6 360 aaKnown RBP9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 ABCG2Q9UNQ0 655 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 A0A096LPI6 279 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 K7EQS6 105 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 KMOO15229 486 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 ERI3O43414 337 aaKnown RBP9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 VEGFDO43915 354 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 C5AR1P21730 350 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 ID2Q02363 134 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 FCHO2Q0JRZ9 810 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 CLCA4Q14CN2 919 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 CHRDL2Q6WN34 429 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 WDR53Q7Z5U6 358 aaPredicted RBP9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 OR8J3Q8NGG0 315 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 LCN9Q8WX39 176 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 MUS81Q96NY9 551 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 TRAPPC9Q96Q05 1148 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 CPPED1Q9BRF8 314 aaPredicted RBP9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 OR52A5Q9H2C5 316 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 SERHLQ9NQF3 203 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 CACNA1IQ9P0X4 2223 aa9.76□□□□□ -0.85
RBFOX1-202ENST00000340209 COL6A3P12111 3177 aa9.75□□□□□ -0.85
RBFOX1-202ENST00000340209 TCRBV5S2A0A599 114 aa9.75□□□□□ -0.85
RBFOX1-202ENST00000340209 DYTNA2CJ06 578 aa9.75□□□□□ -0.85
RBFOX1-202ENST00000340209 C5orf58C9J3I9 102 aa9.75□□□□□ -0.85
RBFOX1-202ENST00000340209 EIF3FO00303 357 aaPredicted RBP9.75□□□□□ -0.85
RBFOX1-202ENST00000340209 GSTT1P30711 240 aa9.75□□□□□ -0.85
RBFOX1-202ENST00000340209 IGFALSP35858 605 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms