RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 ZNF630Q2M218 657 aaPredicted RBP6.07□□□□□ -1.44
PRKDC-202ENST00000338368 DPPA4Q7L190 304 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 NRSN1Q8IZ57 195 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 FAM110BQ8TC76 370 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 SPACA7Q96KW9 195 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 CNOT11Q9UKZ1 510 aaKnown RBP6.07□□□□□ -1.44
PRKDC-202ENST00000338368 HEBP2Q9Y5Z4 205 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 ALOX12P18054 663 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 TAS2R41P59536 307 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 AHSA2Q719I0 299 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 ARHGAP22Q7Z5H3 698 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 OR10G2Q8NGC3 310 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 VAPAQ9P0L0 249 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 UTS2RQ9UKP6 389 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 ZNF99A8MXY4 864 aaPredicted RBP6.07□□□□□ -1.44
PRKDC-202ENST00000338368 C8BP07358 591 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 TIA1P31483 386 aaKnown RBP eCLIP6.07□□□□□ -1.443e-6■■□□□ 14
PRKDC-202ENST00000338368 RYKP34925 604 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 CCT3P49368 545 aaKnown RBP6.07□□□□□ -1.44
PRKDC-202ENST00000338368 RBBP4Q09028 425 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 ASB11Q8WXH4 323 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 MAP10Q9P2G4 905 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 NME6O75414 186 aaPredicted RBP6.07□□□□□ -1.44
PRKDC-202ENST00000338368 SLC6A11P48066 632 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 ARMCX4Q5H9R4 360 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 CWF19L1Q69YN2 538 aaKnown RBP6.07□□□□□ -1.44
PRKDC-202ENST00000338368 NXPE4Q6UWF7 544 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 WDR36Q8NI36 951 aaKnown RBP6.07□□□□□ -1.44
PRKDC-202ENST00000338368 RDH12Q96NR8 316 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 TMEM45AQ9NWC5 275 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 A0A1W2PQU0 124 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 FAM25AB3EWG3 89 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 FAM25CB3EWG5 89 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 FAM25GB3EWG6 89 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 GRIA2P42262 883 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 MAGEA10P43363 369 aaPredicted RBP6.07□□□□□ -1.44
PRKDC-202ENST00000338368 MRPS15P82914 257 aaKnown RBP6.07□□□□□ -1.44
PRKDC-202ENST00000338368 RETREG3Q86VR2 466 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 GPR65Q8IYL9 337 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 HSH2DQ96JZ2 352 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 SMAD5Q99717 465 aaKnown RBP6.07□□□□□ -1.44
PRKDC-202ENST00000338368 PTGFRNQ9P2B2 879 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 IGLON5A6NGN9 336 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 CLDN4O14493 209 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 NDUFS4O43181 175 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 C8orf89P0DMQ9 161 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 NDUFA9Q16795 377 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 ZBED5Q49AG3 693 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 CATSPEREQ5SY80 951 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 OR7G3Q8NG95 312 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 F2RL3Q96RI0 385 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 TBX21Q9UL17 535 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.07□□□□□ -1.44
PRKDC-202ENST00000338368 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.07□□□□□ -1.44
PRKDC-202ENST00000338368 ARHGEF33A8MVX0 844 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 MPZL2O60487 215 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 C6orf47O95873 294 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 IL3P08700 152 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 LINGO3P0C6S8 592 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 PCYT1AP49585 367 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 NCBP2P52298 156 aaKnown RBP eCLIP6.07□□□□□ -1.446e-6■□□□□ 9.6
PRKDC-202ENST00000338368 ZNF33BQ06732 778 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 GRIN2CQ14957 1233 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 UBXN2BQ14CS0 331 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 RTL10Q7L3V2 364 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 CCDC116Q8IYX3 515 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 FAM46DQ8NEK8 389 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 S100ZQ8WXG8 99 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 MTERF3Q96E29 417 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 NKX2-4Q9H2Z4 354 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 GPRC5BQ9NZH0 403 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 COL5A3P25940 1745 aaPredicted RBP6.07□□□□□ -1.44
PRKDC-202ENST00000338368 SOCS2O14508 198 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 CAPN5O15484 640 aaPredicted RBP6.07□□□□□ -1.44
PRKDC-202ENST00000338368 STATHP02808 62 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 GUCA1AP43080 201 aaPredicted RBP6.07□□□□□ -1.44
PRKDC-202ENST00000338368 PRR5P85299 388 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 PTSQ03393 145 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 MTAPQ13126 283 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 INAQ16352 499 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 RBM48Q5RL73 367 aaKnown RBP6.07□□□□□ -1.44
PRKDC-202ENST00000338368 UNC5DQ6UXZ4 953 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 CEACAM20Q6UY09 585 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 CAMKVQ8NCB2 501 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 ZNF831Q5JPB2 1677 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 A0A1W2PP55 124 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 FESP07332 822 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 CD9P21926 228 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 NTSR1P30989 418 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 TALDO1P37837 337 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 DPP6P42658 865 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 DGKEP52429 567 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 SNAP47Q5SQN1 464 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 ZNF730Q6ZMV8 503 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 NEK10Q6ZWH5 1172 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 DTWD1Q8N5C7 304 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 SPPL3Q8TCT6 385 aa6.07□□□□□ -1.44
PRKDC-202ENST00000338368 UNC13CQ8NB66 2214 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 ZNF195O14628 629 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 AXIN1O15169 862 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms