RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 IMP3Q9NV31 184 aaKnown RBP8.5□□□□□ -1.05
SNCA-201ENST00000336904 RLIMQ9NVW2 624 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 KIF17Q9P2E2 1029 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 ZNF639Q9UID6 485 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 SLC6A14Q9UN76 642 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 FAF1Q9UNN5 650 aaPredicted RBP8.5□□□□□ -1.05
SNCA-201ENST00000336904 WDR37Q9Y2I8 494 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 SH3GLB1Q9Y371 365 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 FRYLO94915 3013 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 BCKDKO14874 412 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 KPNA5O15131 536 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 PRNPP04156 253 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 MAPK1P28482 360 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 CDK9P50750 372 aaKnown RBP8.5□□□□□ -1.05
SNCA-201ENST00000336904 NUDT6P53370 316 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 PLA2G16P53816 162 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 ABHD18Q0P651 414 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 HSPB3Q12988 150 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 KCTD21Q4G0X4 260 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 CCNYL2Q5T2Q4 361 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 LIPJQ5W064 366 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 ZDHHC20Q5W0Z9 365 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 CPZQ66K79 652 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 CAPN13Q6MZZ7 669 aaPredicted RBP8.5□□□□□ -1.05
SNCA-201ENST00000336904 KLHL17Q6TDP4 642 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 PIWIL3Q7Z3Z3 882 aaKnown RBP8.5□□□□□ -1.05
SNCA-201ENST00000336904 C11orf74Q86VG3 221 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 SNX29P2Q8IUI4 249 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 PLPP6Q8IY26 295 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 SHISA5Q8N114 240 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 ZCCHC7Q8N3Z6 543 aaKnown RBP8.5□□□□□ -1.05
SNCA-201ENST00000336904 AADATQ8N5Z0 425 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 OR56A3Q8NH54 315 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 HM13Q8TCT9 377 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 CXorf40AQ8TE69 158 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 SLC35A5Q9BS91 424 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 PBX4Q9BYU1 374 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 ZDHHC5Q9C0B5 715 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 CTPS2Q9NRF8 586 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 SELENONQ9NZV5 590 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 RUVBL1Q9Y265 456 aaKnown RBP8.5□□□□□ -1.05
SNCA-201ENST00000336904 YBX2Q9Y2T7 364 aaKnown RBP8.5□□□□□ -1.05
SNCA-201ENST00000336904 DYRK1BQ9Y463 629 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 A0A1W2PS29 197 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 J3QRK9 145 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 GCM2O75603 506 aaPredicted RBP8.49□□□□□ -1.05
SNCA-201ENST00000336904 BMP10O95393 424 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 RRM2P31350 389 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 TIA1P31483 386 aaKnown RBP eCLIP8.49□□□□□ -1.05
SNCA-201ENST00000336904 DCDC1P59894 354 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 LRRC74AQ0VAA2 488 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 DMC1Q14565 340 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 SLC5A12Q1EHB4 618 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 DPY19L1Q2PZI1 675 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 AP1ARQ63HQ0 302 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 KIAA1211LQ6NV74 962 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 VITQ6UXI7 678 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 RD3Q7Z3Z2 195 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 KIAA0907Q7Z7F0 614 aaPredicted RBP8.49□□□□□ -1.05
SNCA-201ENST00000336904 MEX3DQ86XN8 651 aaKnown RBP8.49□□□□□ -1.05
SNCA-201ENST00000336904 ADHFE1Q8IWW8 467 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 TERB1Q8NA31 727 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 ZFAND2BQ8WV99 257 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 TFGQ92734 400 aaPredicted RBP8.49□□□□□ -1.05
SNCA-201ENST00000336904 ABTB1Q969K4 478 aaPredicted RBP8.49□□□□□ -1.05
SNCA-201ENST00000336904 PRSS16Q9NQE7 514 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 ERVK-18Q9QC07 812 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 MAN2B2Q9Y2E5 1009 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 KLHL18O94889 574 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 FADS2O95864 444 aaKnown RBP8.49□□□□□ -1.05
SNCA-201ENST00000336904 FABP3P05413 133 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 CRHBPP24387 322 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 DDX6P26196 483 aaKnown RBP eCLIP8.49□□□□□ -1.05
SNCA-201ENST00000336904 CHI3L1P36222 383 aaPredicted RBP8.49□□□□□ -1.05
SNCA-201ENST00000336904 PNLIPRP1P54315 467 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 TFF2Q03403 129 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 TMED1Q13445 227 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 ELAVL3Q14576 367 aaKnown RBP8.49□□□□□ -1.05
SNCA-201ENST00000336904 RGNQ15493 299 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 WSCD2Q2TBF2 565 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 ZNF750Q32MQ0 723 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 OR2T5Q6IEZ7 315 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 ERN2Q76MJ5 926 aaKnown RBP8.49□□□□□ -1.05
SNCA-201ENST00000336904 VN1R5Q7Z5H4 357 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 OR9A1PQ8NGU1 263 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 OR2T29Q8NH02 315 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 SLC5A11Q8WWX8 675 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 EXOSC8Q96B26 276 aaKnown RBP8.49□□□□□ -1.05
SNCA-201ENST00000336904 CSF3RQ99062 836 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 YIPF4Q9BSR8 244 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 KLHL25Q9H0H3 589 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 TMEM245Q9H330 911 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 EPB41L1Q9H4G0 881 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 DMRT3Q9NQL9 472 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 CCDC177Q9NQR7 707 aaPredicted RBP8.49□□□□□ -1.05
SNCA-201ENST00000336904 BAG5Q9UL15 447 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 MAFFQ9ULX9 164 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 HEATR5BQ9P2D3 2071 aa8.49□□□□□ -1.05
SNCA-201ENST00000336904 SLC9A3R1O14745 358 aaPredicted RBP8.48□□□□□ -1.05
SNCA-201ENST00000336904 SLC31A1O15431 190 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms