RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 EVPLLA8MZ36 301 aa13.41□□□□□ -0.26
SF1-202ENST00000334944 AKR7A2O43488 359 aa13.41□□□□□ -0.26
SF1-202ENST00000334944 CLDN9O95484 217 aa13.41□□□□□ -0.26
SF1-202ENST00000334944 PTTG1O95997 202 aa13.41□□□□□ -0.26
SF1-202ENST00000334944 PREPP48147 710 aa13.41□□□□□ -0.26
SF1-202ENST00000334944 ISL1P61371 349 aa13.41□□□□□ -0.26
SF1-202ENST00000334944 CYP4F3Q08477 520 aa13.41□□□□□ -0.26
SF1-202ENST00000334944 ARHGEF6Q15052 776 aa13.41□□□□□ -0.26
SF1-202ENST00000334944 TAB1Q15750 504 aa13.41□□□□□ -0.26
SF1-202ENST00000334944 TTLL9Q3SXZ7 439 aa13.41□□□□□ -0.26
SF1-202ENST00000334944 CCSMST1Q4G0I0 132 aa13.41□□□□□ -0.26
SF1-202ENST00000334944 TRIM48Q8IWZ4 208 aa13.41□□□□□ -0.26
SF1-202ENST00000334944 FAM217AQ8IXS0 508 aa13.41□□□□□ -0.26
SF1-202ENST00000334944 FAM109AQ8N4B1 249 aa13.41□□□□□ -0.26
SF1-202ENST00000334944 YIPF6Q96EC8 236 aa13.41□□□□□ -0.26
SF1-202ENST00000334944 MTERF1Q99551 399 aaKnown RBP13.41□□□□□ -0.26
SF1-202ENST00000334944 MMP28Q9H239 520 aa13.41□□□□□ -0.26
SF1-202ENST00000334944 RC3H2Q9HBD1 1191 aaKnown RBP13.41□□□□□ -0.26
SF1-202ENST00000334944 ASAH2Q9NR71 780 aa13.41□□□□□ -0.26
SF1-202ENST00000334944 RASSF1Q9NS23 344 aa13.41□□□□□ -0.26
SF1-202ENST00000334944 KCTD5Q9NXV2 234 aa13.41□□□□□ -0.26
SF1-202ENST00000334944 TEKT2Q9UIF3 430 aa13.41□□□□□ -0.26
SF1-202ENST00000334944 SNX8Q9Y5X2 465 aa13.41□□□□□ -0.26
SF1-202ENST00000334944 LOC100130705A0A1B0GUX0 176 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 ISPDA4D126 451 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 IFRD1O00458 451 aaPredicted RBP13.4□□□□□ -0.26
SF1-202ENST00000334944 PRKD3O94806 890 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 LATS1O95835 1130 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 APOA1P02647 267 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 ATF4P18848 351 aaPredicted RBP13.4□□□□□ -0.26
SF1-202ENST00000334944 TP53BP2Q13625 1128 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 ZNF181Q2M3W8 571 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 GPR33Q49SQ1 333 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 LY6G5CQ5SRR4 150 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 CACHD1Q5VU97 1274 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 TTC23Q5W5X9 447 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 TMEM179BQ7Z7N9 219 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 TCAIMQ8N3R3 496 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 DPP10Q8N608 796 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 FKBP14Q9NWM8 211 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 TAS2R9Q9NYW1 312 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 VPS4AQ9UN37 437 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 PCDHB14Q9Y5E9 798 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 USP34Q70CQ2 3546 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 MYO9BQ13459 2157 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 SNTNA6NMZ2 147 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 POLR1CO15160 346 aaPredicted RBP13.4□□□□□ -0.26
SF1-202ENST00000334944 PRSS23O95084 383 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 ANXA6P08133 673 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 TYRP14679 529 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 RRM2P31350 389 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 SLC7A9P82251 487 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 CDK5R2Q13319 367 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 SLC14A1Q13336 389 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 IRF3Q14653 427 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 SYCE2Q6PIF2 218 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 UBQLNLQ8IYU4 475 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 FAM162AQ96A26 154 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 TRIM43Q96BQ3 446 aaPredicted RBP13.4□□□□□ -0.26
SF1-202ENST00000334944 TCF25Q9BQ70 676 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 ROGDIQ9GZN7 287 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 AMBNQ9NP70 447 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 ZDHHC4Q9NPG8 344 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 C1orf109Q9NX04 203 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 GPRC5BQ9NZH0 403 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 ZNF639Q9UID6 485 aa13.4□□□□□ -0.26
SF1-202ENST00000334944 OBSL1O75147 1896 aa13.39□□□□□ -0.27
SF1-202ENST00000334944 LEFTY1O75610 366 aa13.39□□□□□ -0.27
SF1-202ENST00000334944 SPINT3P49223 89 aa13.39□□□□□ -0.27
SF1-202ENST00000334944 ST13P50502 369 aaKnown RBP13.39□□□□□ -0.27
SF1-202ENST00000334944 METAP1P53582 386 aa13.39□□□□□ -0.27
SF1-202ENST00000334944 CARD16Q5EG05 197 aa13.39□□□□□ -0.27
SF1-202ENST00000334944 ARSIQ5FYB1 569 aa13.39□□□□□ -0.27
SF1-202ENST00000334944 OR2A12Q8NGT7 310 aa13.39□□□□□ -0.27
SF1-202ENST00000334944 MED8Q96G25 268 aa13.39□□□□□ -0.27
SF1-202ENST00000334944 ZSWIM3Q96MP5 696 aa13.39□□□□□ -0.27
SF1-202ENST00000334944 PHOX2BQ99453 314 aa13.39□□□□□ -0.27
SF1-202ENST00000334944 ZSCAN5AQ9BUG6 496 aa13.39□□□□□ -0.27
SF1-202ENST00000334944 LILRB3O75022 631 aa13.39□□□□□ -0.27
SF1-202ENST00000334944 CST1P01037 141 aa13.39□□□□□ -0.27
SF1-202ENST00000334944 HIST1H2AGP0C0S8 130 aaPredicted RBP13.39□□□□□ -0.27
SF1-202ENST00000334944 EBLN1P0CF75 366 aa13.39□□□□□ -0.27
SF1-202ENST00000334944 GGT1P19440 569 aa13.39□□□□□ -0.27
SF1-202ENST00000334944 HIST1H2ADP20671 130 aa13.39□□□□□ -0.27
SF1-202ENST00000334944 ALDH6A1Q02252 535 aaKnown RBP13.39□□□□□ -0.27
SF1-202ENST00000334944 CHRNB3Q05901 458 aa13.39□□□□□ -0.27
SF1-202ENST00000334944 LRRC26Q2I0M4 334 aa13.39□□□□□ -0.27
SF1-202ENST00000334944 PRSS36Q5K4E3 855 aa13.39□□□□□ -0.27
SF1-202ENST00000334944 BPIFB1Q8TDL5 484 aa13.39□□□□□ -0.27
SF1-202ENST00000334944 CHAC2Q8WUX2 184 aa13.39□□□□□ -0.27
SF1-202ENST00000334944 HIST1H2AHQ96KK5 128 aa13.39□□□□□ -0.27
SF1-202ENST00000334944 Q96MT0 163 aa13.39□□□□□ -0.27
SF1-202ENST00000334944 HIST1H2AJQ99878 128 aa13.39□□□□□ -0.27
SF1-202ENST00000334944 H2AFJQ9BTM1 129 aa13.39□□□□□ -0.27
SF1-202ENST00000334944 ZBP1Q9H171 429 aa13.39□□□□□ -0.27
SF1-202ENST00000334944 SLC32A1Q9H598 525 aa13.39□□□□□ -0.27
SF1-202ENST00000334944 OSGIN1Q9UJX0 560 aa13.39□□□□□ -0.27
SF1-202ENST00000334944 PPT2Q9UMR5 302 aa13.39□□□□□ -0.27
SF1-202ENST00000334944 PCDHGB6Q9Y5F9 930 aa13.39□□□□□ -0.27
SF1-202ENST00000334944 HAT1O14929 419 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms