RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 RPS13P62277 151 aaKnown RBP16.67■□□□□ 0.26
CHGA-202ENST00000334654 IFT88Q13099 833 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 DDX39BQ13838 428 aaKnown RBP16.67■□□□□ 0.26
CHGA-202ENST00000334654 COL9A2Q14055 689 aaPredicted RBP16.67■□□□□ 0.26
CHGA-202ENST00000334654 SGO1Q5FBB7 561 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 TCTE1Q5JU00 501 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 RNF165Q6ZSG1 346 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 CSNK1A1LQ8N752 337 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 CAMKVQ8NCB2 501 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 OR8K5Q8NH50 307 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 SELENOMQ8WWX9 145 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 RERGQ96A58 199 aaPredicted RBP16.67■□□□□ 0.26
CHGA-202ENST00000334654 CTRCQ99895 268 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 ELOVL6Q9H5J4 265 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 SERTAD3Q9UJW9 196 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 RARRES3Q9UL19 164 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 MRPS2Q9Y399 296 aaKnown RBP16.67■□□□□ 0.26
CHGA-202ENST00000334654 CCL27Q9Y4X3 112 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 PTGDR2Q9Y5Y4 395 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 AKAP13Q12802 2813 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 LRIT2A6NDA9 550 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 POLR3GO15318 223 aaPredicted RBP16.67■□□□□ 0.26
CHGA-202ENST00000334654 NDUFS4O43181 175 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 OR2B3O76000 313 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 TGFB1P01137 390 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 SMIM10L1P0DMW3 83 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 ZNF33BQ06732 778 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 C3orf38Q5JPI3 329 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 MANEAQ5SRI9 462 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 C10orf62Q5T681 223 aaPredicted RBP16.67■□□□□ 0.26
CHGA-202ENST00000334654 DEPDC1Q5TB30 811 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 PWWP2BQ6NUJ5 590 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 FAM47EQ6ZV65 393 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 TRIM46Q7Z4K8 759 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 UBE3DQ7Z6J8 389 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 BPHLQ86WA6 291 aaPredicted RBP16.67■□□□□ 0.26
CHGA-202ENST00000334654 PPP1R3BQ86XI6 285 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 TWIST2Q8WVJ9 160 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 N4BP2L2Q92802 583 aaPredicted RBP16.67■□□□□ 0.26
CHGA-202ENST00000334654 SMIM10Q96HG1 83 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 C10orf90Q96M02 699 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 ZNF317Q96PQ6 595 aaPredicted RBP16.67■□□□□ 0.26
CHGA-202ENST00000334654 OR51B5Q9H339 312 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 SLC39A1Q9NY26 324 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 PISDQ9UG56 409 aa16.67■□□□□ 0.26
CHGA-202ENST00000334654 CACNA1AO00555 2505 aa16.66■□□□□ 0.26
CHGA-202ENST00000334654 WDFY3Q8IZQ1 3526 aa16.66■□□□□ 0.26
CHGA-202ENST00000334654 ZNF195O14628 629 aa16.66■□□□□ 0.26
CHGA-202ENST00000334654 POLR1CO15160 346 aaPredicted RBP16.66■□□□□ 0.26
CHGA-202ENST00000334654 EDF1O60869 148 aaKnown RBP16.66■□□□□ 0.26
CHGA-202ENST00000334654 CRCPO75575 148 aa16.66■□□□□ 0.26
CHGA-202ENST00000334654 SERPIND1P05546 499 aa16.66■□□□□ 0.26
CHGA-202ENST00000334654 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.66■□□□□ 0.26
CHGA-202ENST00000334654 TMEM214Q6NUQ4 689 aaKnown RBP16.66■□□□□ 0.26
CHGA-202ENST00000334654 Q6ZSR9 355 aa16.66■□□□□ 0.26
CHGA-202ENST00000334654 DTWD1Q8N5C7 304 aa16.66■□□□□ 0.26
CHGA-202ENST00000334654 ZNF655Q8N720 491 aaPredicted RBP16.66■□□□□ 0.26
CHGA-202ENST00000334654 SLC38A9Q8NBW4 561 aa16.66■□□□□ 0.26
CHGA-202ENST00000334654 MS4A6EQ96DS6 147 aa16.66■□□□□ 0.26
CHGA-202ENST00000334654 CMTM7Q96FZ5 175 aa16.66■□□□□ 0.26
CHGA-202ENST00000334654 C3orf30Q96M34 536 aa16.66■□□□□ 0.26
CHGA-202ENST00000334654 F2RL3Q96RI0 385 aa16.66■□□□□ 0.26
CHGA-202ENST00000334654 TAAR9Q96RI9 348 aa16.66■□□□□ 0.26
CHGA-202ENST00000334654 ACPTQ9BZG2 426 aa16.66■□□□□ 0.26
CHGA-202ENST00000334654 BRF2Q9HAW0 419 aa16.66■□□□□ 0.26
CHGA-202ENST00000334654 FANCEQ9HB96 536 aa16.66■□□□□ 0.26
CHGA-202ENST00000334654 PCDHGA8Q9Y5G5 932 aa16.66■□□□□ 0.26
CHGA-202ENST00000334654 B3GALT1Q9Y5Z6 326 aa16.66■□□□□ 0.26
CHGA-202ENST00000334654 C9orf172C9J069 976 aa16.65■□□□□ 0.26
CHGA-202ENST00000334654 TXNDC9O14530 226 aa16.65■□□□□ 0.26
CHGA-202ENST00000334654 PIP5K1BO14986 540 aa16.65■□□□□ 0.26
CHGA-202ENST00000334654 ZSCAN9O15535 394 aaPredicted RBP16.65■□□□□ 0.26
CHGA-202ENST00000334654 ZNF749O43361 778 aa16.65■□□□□ 0.26
CHGA-202ENST00000334654 SH3BGRLO75368 114 aa16.65■□□□□ 0.26
CHGA-202ENST00000334654 SLC35G6P0C7Q6 338 aa16.65■□□□□ 0.26
CHGA-202ENST00000334654 JMJD7P0C870 316 aa16.65■□□□□ 0.26
CHGA-202ENST00000334654 ZNF28P17035 718 aa16.65■□□□□ 0.26
CHGA-202ENST00000334654 PTX3P26022 381 aaPredicted RBP16.65■□□□□ 0.26
CHGA-202ENST00000334654 MAPK10P53779 464 aa16.65■□□□□ 0.26
CHGA-202ENST00000334654 EMP3P54852 163 aa16.65■□□□□ 0.26
CHGA-202ENST00000334654 FOXC1Q12948 553 aa16.65■□□□□ 0.26
CHGA-202ENST00000334654 CSTF3Q12996 717 aaKnown RBP16.65■□□□□ 0.26
CHGA-202ENST00000334654 TOR1AIP1Q5JTV8 583 aa16.65■□□□□ 0.26
CHGA-202ENST00000334654 KHDRBS2Q5VWX1 349 aaKnown RBP16.65■□□□□ 0.26
CHGA-202ENST00000334654 TLDC1Q6P9B6 456 aa16.65■□□□□ 0.26
CHGA-202ENST00000334654 MAVSQ7Z434 540 aa16.65■□□□□ 0.26
CHGA-202ENST00000334654 GPR135Q8IZ08 494 aa16.65■□□□□ 0.26
CHGA-202ENST00000334654 AFAP1L2Q8N4X5 818 aa16.65■□□□□ 0.26
CHGA-202ENST00000334654 OR2T11Q8NH01 316 aa16.65■□□□□ 0.26
CHGA-202ENST00000334654 PIWIL2Q8TC59 973 aaKnown RBP16.65■□□□□ 0.26
CHGA-202ENST00000334654 UTP15Q8TED0 518 aaKnown RBP16.65■□□□□ 0.26
CHGA-202ENST00000334654 CCT6BQ92526 530 aa16.65■□□□□ 0.26
CHGA-202ENST00000334654 SPRY4Q9C004 299 aa16.65■□□□□ 0.26
CHGA-202ENST00000334654 POLR1BQ9H9Y6 1135 aa16.65■□□□□ 0.26
CHGA-202ENST00000334654 LHX9Q9NQ69 397 aa16.65■□□□□ 0.26
CHGA-202ENST00000334654 MARCOQ9UEW3 520 aaPredicted RBP16.65■□□□□ 0.26
CHGA-202ENST00000334654 KLK13Q9UKR3 277 aa16.65■□□□□ 0.26
CHGA-202ENST00000334654 PCDHGA3Q9Y5H0 932 aa16.65■□□□□ 0.26
CHGA-202ENST00000334654 SDK2Q58EX2 2172 aa16.65■□□□□ 0.26
CHGA-202ENST00000334654 AHCTF1Q8WYP5 2266 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms