RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 GATMP50440 423 aa22.75■■□□□ 1.23
TSKU-201ENST00000333090 LRRC66Q68CR7 880 aa22.75■■□□□ 1.23
TSKU-201ENST00000333090 SLC24A5Q71RS6 500 aa22.75■■□□□ 1.23
TSKU-201ENST00000333090 TSPAN33Q86UF1 283 aa22.75■■□□□ 1.23
TSKU-201ENST00000333090 NAGSQ8N159 534 aa22.75■■□□□ 1.23
TSKU-201ENST00000333090 CRELD1Q96HD1 420 aa22.75■■□□□ 1.23
TSKU-201ENST00000333090 CWH43Q9H720 699 aa22.75■■□□□ 1.23
TSKU-201ENST00000333090 CFAP20Q9Y6A4 193 aaKnown RBP22.75■■□□□ 1.23
TSKU-201ENST00000333090 A0A1W2PQ67 120 aa22.75■■□□□ 1.23
TSKU-201ENST00000333090 PCDH7O60245 1069 aa22.75■■□□□ 1.23
TSKU-201ENST00000333090 ABCB1P08183 1280 aaPredicted RBP22.75■■□□□ 1.23
TSKU-201ENST00000333090 HLA-EP13747 358 aa22.75■■□□□ 1.23
TSKU-201ENST00000333090 ACPPP15309 386 aa22.75■■□□□ 1.23
TSKU-201ENST00000333090 NSG1P42857 185 aa22.75■■□□□ 1.23
TSKU-201ENST00000333090 PXNP49023 591 aaPredicted RBP22.75■■□□□ 1.23
TSKU-201ENST00000333090 RGNQ15493 299 aa22.75■■□□□ 1.23
TSKU-201ENST00000333090 EXOC3L2Q2M3D2 409 aa22.75■■□□□ 1.23
TSKU-201ENST00000333090 ZFP69Q49AA0 526 aa22.75■■□□□ 1.23
TSKU-201ENST00000333090 CCDC32Q9BV29 185 aa22.75■■□□□ 1.23
TSKU-201ENST00000333090 EXOSC4Q9NPD3 245 aaKnown RBP22.75■■□□□ 1.23
TSKU-201ENST00000333090 WDR70Q9NW82 654 aa22.75■■□□□ 1.23
TSKU-201ENST00000333090 NPAP1Q9NZP6 1156 aa22.75■■□□□ 1.23
TSKU-201ENST00000333090 TBL1XO60907 577 aa22.74■■□□□ 1.23
TSKU-201ENST00000333090 GCM2O75603 506 aaPredicted RBP22.74■■□□□ 1.23
TSKU-201ENST00000333090 EOMESO95936 686 aa22.74■■□□□ 1.23
TSKU-201ENST00000333090 ADRA2AP08913 450 aa22.74■■□□□ 1.23
TSKU-201ENST00000333090 ANXA8P13928 327 aa22.74■■□□□ 1.23
TSKU-201ENST00000333090 TNFSF8P32971 234 aa22.74■■□□□ 1.23
TSKU-201ENST00000333090 BCL2L1Q07817 233 aa22.74■■□□□ 1.23
TSKU-201ENST00000333090 GAB1Q13480 694 aa22.74■■□□□ 1.23
TSKU-201ENST00000333090 IRF3Q14653 427 aa22.74■■□□□ 1.23
TSKU-201ENST00000333090 STARD3Q14849 445 aa22.74■■□□□ 1.23
TSKU-201ENST00000333090 EIF4HQ15056 248 aaKnown RBP22.74■■□□□ 1.23
TSKU-201ENST00000333090 CYP27C1Q4G0S4 372 aa22.74■■□□□ 1.23
TSKU-201ENST00000333090 RTP2Q5QGT7 225 aa22.74■■□□□ 1.23
TSKU-201ENST00000333090 ZNF367Q7RTV3 350 aa22.74■■□□□ 1.23
TSKU-201ENST00000333090 OR2A14Q96R47 310 aa22.74■■□□□ 1.23
TSKU-201ENST00000333090 TAS2R9Q9NYW1 312 aa22.74■■□□□ 1.23
TSKU-201ENST00000333090 TBC1D14Q9P2M4 693 aa22.74■■□□□ 1.23
TSKU-201ENST00000333090 OGDHLQ9ULD0 1010 aa22.74■■□□□ 1.23
TSKU-201ENST00000333090 LINC00854A0A1B0GVQ3 168 aa22.74■■□□□ 1.23
TSKU-201ENST00000333090 ZNF840PA6NDX5 716 aa22.74■■□□□ 1.23
TSKU-201ENST00000333090 CBSLP0DN79 551 aa22.74■■□□□ 1.23
TSKU-201ENST00000333090 CXCR2P25025 360 aa22.74■■□□□ 1.23
TSKU-201ENST00000333090 CBSP35520 551 aa22.74■■□□□ 1.23
TSKU-201ENST00000333090 SLC6A12P48065 614 aa22.74■■□□□ 1.23
TSKU-201ENST00000333090 AP1S1P61966 158 aa22.74■■□□□ 1.23
TSKU-201ENST00000333090 SELENOWP63302 87 aa22.74■■□□□ 1.23
TSKU-201ENST00000333090 C11orf65Q8NCR3 313 aa22.74■■□□□ 1.23
TSKU-201ENST00000333090 PLD4Q96BZ4 506 aa22.74■■□□□ 1.23
TSKU-201ENST00000333090 SLC12A9Q9BXP2 914 aa22.74■■□□□ 1.23
TSKU-201ENST00000333090 CHST8Q9H2A9 424 aa22.74■■□□□ 1.23
TSKU-201ENST00000333090 DNAJC11Q9NVH1 559 aa22.74■■□□□ 1.23
TSKU-201ENST00000333090 VPS29Q9UBQ0 182 aa22.74■■□□□ 1.23
TSKU-201ENST00000333090 SMAD6O43541 496 aaKnown RBP22.73■■□□□ 1.23
TSKU-201ENST00000333090 PRMT3O60678 531 aa22.73■■□□□ 1.23
TSKU-201ENST00000333090 RACK1P63244 317 aaKnown RBP22.73■■□□□ 1.23
TSKU-201ENST00000333090 ACSM2AQ08AH3 577 aa22.73■■□□□ 1.23
TSKU-201ENST00000333090 MBTPS1Q14703 1052 aa22.73■■□□□ 1.23
TSKU-201ENST00000333090 TIMM50Q3ZCQ8 353 aa22.73■■□□□ 1.23
TSKU-201ENST00000333090 GPR33Q49SQ1 333 aa22.73■■□□□ 1.23
TSKU-201ENST00000333090 ACSM2BQ68CK6 577 aa22.73■■□□□ 1.23
TSKU-201ENST00000333090 ZNF517Q6ZMY9 492 aaPredicted RBP22.73■■□□□ 1.23
TSKU-201ENST00000333090 ASCC1Q8N9N2 400 aaKnown RBP22.73■■□□□ 1.23
TSKU-201ENST00000333090 GPR26Q8NDV2 337 aa22.73■■□□□ 1.23
TSKU-201ENST00000333090 BOLA1Q9Y3E2 137 aa22.73■■□□□ 1.23
TSKU-201ENST00000333090 MANSC4A6NHS7 340 aaPredicted RBP22.73■■□□□ 1.23
TSKU-201ENST00000333090 NT5C1B-RDH14C9J2C7 533 aa22.73■■□□□ 1.23
TSKU-201ENST00000333090 ARHGAP33O14559 1287 aa22.73■■□□□ 1.23
TSKU-201ENST00000333090 CRATP43155 626 aa22.73■■□□□ 1.23
TSKU-201ENST00000333090 CDKL4Q5MAI5 379 aa22.73■■□□□ 1.23
TSKU-201ENST00000333090 VRK3Q8IV63 474 aa22.73■■□□□ 1.23
TSKU-201ENST00000333090 GTPBP3Q969Y2 492 aaKnown RBP22.73■■□□□ 1.23
TSKU-201ENST00000333090 TMCO6Q96DC7 493 aa22.73■■□□□ 1.23
TSKU-201ENST00000333090 SNX18Q96RF0 628 aa22.73■■□□□ 1.23
TSKU-201ENST00000333090 ZNF556Q9HAH1 456 aa22.73■■□□□ 1.23
TSKU-201ENST00000333090 NPIPB8E9PQR5 432 aa22.73■■□□□ 1.23
TSKU-201ENST00000333090 CCRL2O00421 344 aa22.73■■□□□ 1.23
TSKU-201ENST00000333090 SLITRK5O94991 958 aa22.73■■□□□ 1.23
TSKU-201ENST00000333090 CSKP41240 450 aa22.73■■□□□ 1.23
TSKU-201ENST00000333090 IRF8Q02556 426 aa22.73■■□□□ 1.23
TSKU-201ENST00000333090 MICAQ29983 383 aa22.73■■□□□ 1.23
TSKU-201ENST00000333090 ARMC4Q5T2S8 1044 aa22.73■■□□□ 1.23
TSKU-201ENST00000333090 TTC23LQ6PF05 361 aa22.73■■□□□ 1.23
TSKU-201ENST00000333090 TPGS1Q6ZTW0 290 aa22.73■■□□□ 1.23
TSKU-201ENST00000333090 ATCAYQ86WG3 371 aa22.73■■□□□ 1.23
TSKU-201ENST00000333090 ST13P5Q8NFI4 369 aaPredicted RBP22.73■■□□□ 1.23
TSKU-201ENST00000333090 WDR36Q8NI36 951 aaKnown RBP22.73■■□□□ 1.23
TSKU-201ENST00000333090 LINC01599Q8WXQ3 324 aa22.73■■□□□ 1.23
TSKU-201ENST00000333090 P2RY13Q9BPV8 354 aa22.73■■□□□ 1.23
TSKU-201ENST00000333090 TTLL2Q9BWV7 592 aa22.73■■□□□ 1.23
TSKU-201ENST00000333090 RNF38Q9H0F5 515 aa22.73■■□□□ 1.23
TSKU-201ENST00000333090 CRNNQ9UBG3 495 aaPredicted RBP22.73■■□□□ 1.23
TSKU-201ENST00000333090 GABRR3A8MPY1 467 aa22.72■■□□□ 1.23
TSKU-201ENST00000333090 CENPXA8MT69 81 aa22.72■■□□□ 1.23
TSKU-201ENST00000333090 JUPP14923 745 aa22.72■■□□□ 1.23
TSKU-201ENST00000333090 AZGP1P25311 298 aaKnown RBP22.72■■□□□ 1.23
TSKU-201ENST00000333090 PCGF2P35227 344 aa22.72■■□□□ 1.23
TSKU-201ENST00000333090 TIE1P35590 1138 aa22.72■■□□□ 1.23
TSKU-201ENST00000333090 GPR50Q13585 617 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms