RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 RIPPLY2Q5TAB7 128 aa13.82□□□□□ -0.2
CTHRC1-201ENST00000330295 KIAA0930Q6ICG6 404 aaPredicted RBP13.82□□□□□ -0.2
CTHRC1-201ENST00000330295 GSTA5Q7RTV2 222 aa13.82□□□□□ -0.2
CTHRC1-201ENST00000330295 LINC01560Q8TB33 94 aa13.82□□□□□ -0.2
CTHRC1-201ENST00000330295 C1orf54Q8WWF1 131 aa13.82□□□□□ -0.2
CTHRC1-201ENST00000330295 ATG4AQ8WYN0 398 aa13.82□□□□□ -0.2
CTHRC1-201ENST00000330295 ULK4Q96C45 1275 aa13.82□□□□□ -0.2
CTHRC1-201ENST00000330295 SMC6Q96SB8 1091 aa13.82□□□□□ -0.2
CTHRC1-201ENST00000330295 FKBPLQ9UIM3 349 aa13.82□□□□□ -0.2
CTHRC1-201ENST00000330295 ARHGAP21Q5T5U3 1957 aa13.82□□□□□ -0.2
CTHRC1-201ENST00000330295 LIN7AO14910 233 aaPredicted RBP13.81□□□□□ -0.2
CTHRC1-201ENST00000330295 NRP2O60462 931 aa13.81□□□□□ -0.2
CTHRC1-201ENST00000330295 CYC1P08574 325 aa13.81□□□□□ -0.2
CTHRC1-201ENST00000330295 GSTM1P09488 218 aa13.81□□□□□ -0.2
CTHRC1-201ENST00000330295 NID1P14543 1247 aa13.81□□□□□ -0.2
CTHRC1-201ENST00000330295 ADRA1AP35348 466 aa13.81□□□□□ -0.2
CTHRC1-201ENST00000330295 HLCSP50747 726 aa13.81□□□□□ -0.2
CTHRC1-201ENST00000330295 GSTM4Q03013 218 aa13.81□□□□□ -0.2
CTHRC1-201ENST00000330295 SNX1Q13596 522 aa13.81□□□□□ -0.2
CTHRC1-201ENST00000330295 C1orf185Q5T7R7 199 aa13.81□□□□□ -0.2
CTHRC1-201ENST00000330295 RNF44Q7L0R7 432 aa13.81□□□□□ -0.2
CTHRC1-201ENST00000330295 ANKRD37Q7Z713 158 aa13.81□□□□□ -0.2
CTHRC1-201ENST00000330295 PBKQ96KB5 322 aa13.81□□□□□ -0.2
CTHRC1-201ENST00000330295 C19orf43Q9BQ61 176 aa13.81□□□□□ -0.2
CTHRC1-201ENST00000330295 APOL2Q9BQE5 337 aa13.81□□□□□ -0.2
CTHRC1-201ENST00000330295 ARNT2Q9HBZ2 717 aa13.81□□□□□ -0.2
CTHRC1-201ENST00000330295 PAK5Q9P286 719 aa13.81□□□□□ -0.2
CTHRC1-201ENST00000330295 DRG1Q9Y295 367 aaKnown RBP13.81□□□□□ -0.2
CTHRC1-201ENST00000330295 ARL5AQ9Y689 179 aa13.81□□□□□ -0.2
CTHRC1-201ENST00000330295 TGP01266 2768 aa13.8□□□□□ -0.2
CTHRC1-201ENST00000330295 IGLV3-16A0A075B6K0 115 aa13.8□□□□□ -0.2
CTHRC1-201ENST00000330295 WDR1O75083 606 aa13.8□□□□□ -0.2
CTHRC1-201ENST00000330295 FKBP9O95302 570 aa13.8□□□□□ -0.2
CTHRC1-201ENST00000330295 BMP5P22003 454 aa13.8□□□□□ -0.2
CTHRC1-201ENST00000330295 GPR85P60893 370 aa13.8□□□□□ -0.2
CTHRC1-201ENST00000330295 XIAPP98170 497 aa13.8□□□□□ -0.2
CTHRC1-201ENST00000330295 MAT1AQ00266 395 aaKnown RBP13.8□□□□□ -0.2
CTHRC1-201ENST00000330295 OASLQ15646 514 aaKnown RBP13.8□□□□□ -0.2
CTHRC1-201ENST00000330295 CHRFAM7AQ494W8 412 aa13.8□□□□□ -0.2
CTHRC1-201ENST00000330295 MINDY4Q4G0A6 757 aa13.8□□□□□ -0.2
CTHRC1-201ENST00000330295 C10orf62Q5T681 223 aaPredicted RBP13.8□□□□□ -0.2
CTHRC1-201ENST00000330295 MFSD4BQ5TF39 518 aa13.8□□□□□ -0.2
CTHRC1-201ENST00000330295 DRICH1Q6PGQ1 229 aaPredicted RBP13.8□□□□□ -0.2
CTHRC1-201ENST00000330295 PPP1R21Q6ZMI0 780 aa13.8□□□□□ -0.2
CTHRC1-201ENST00000330295 KIF18BQ86Y91 864 aa13.8□□□□□ -0.2
CTHRC1-201ENST00000330295 OR4K2Q8NGD2 314 aa13.8□□□□□ -0.2
CTHRC1-201ENST00000330295 IL17FQ96PD4 163 aa13.8□□□□□ -0.2
CTHRC1-201ENST00000330295 HS3ST6Q96QI5 342 aa13.8□□□□□ -0.2
CTHRC1-201ENST00000330295 FAM96AQ9H5X1 160 aa13.8□□□□□ -0.2
CTHRC1-201ENST00000330295 MTRF1LQ9UGC7 380 aaKnown RBP13.8□□□□□ -0.2
CTHRC1-201ENST00000330295 KLK4Q9Y5K2 254 aa13.8□□□□□ -0.2
CTHRC1-201ENST00000330295 A0A0A6YYC8 382 aaPredicted RBP13.79□□□□□ -0.2
CTHRC1-201ENST00000330295 HSPB2A8KAH6 182 aa13.79□□□□□ -0.2
CTHRC1-201ENST00000330295 I3L1I5 382 aaPredicted RBP13.79□□□□□ -0.2
CTHRC1-201ENST00000330295 AP3B1O00203 1094 aa13.79□□□□□ -0.2
CTHRC1-201ENST00000330295 DVL2O14641 736 aa13.79□□□□□ -0.2
CTHRC1-201ENST00000330295 METTL18O95568 372 aa13.79□□□□□ -0.2
CTHRC1-201ENST00000330295 CXCR5P32302 372 aa13.79□□□□□ -0.2
CTHRC1-201ENST00000330295 TRHRP34981 398 aaPredicted RBP13.79□□□□□ -0.2
CTHRC1-201ENST00000330295 AGTR2P50052 363 aa13.79□□□□□ -0.2
CTHRC1-201ENST00000330295 SPARCL1Q14515 664 aa13.79□□□□□ -0.2
CTHRC1-201ENST00000330295 BRD3Q15059 726 aa13.79□□□□□ -0.2
CTHRC1-201ENST00000330295 HSPB2Q16082 182 aa13.79□□□□□ -0.2
CTHRC1-201ENST00000330295 PAPD4Q6PIY7 484 aaKnown RBP13.79□□□□□ -0.2
CTHRC1-201ENST00000330295 KLHDC8BQ8IXV7 354 aa13.79□□□□□ -0.2
CTHRC1-201ENST00000330295 CLDN19Q8N6F1 224 aa13.79□□□□□ -0.2
CTHRC1-201ENST00000330295 OR2L8Q8NGY9 312 aa13.79□□□□□ -0.2
CTHRC1-201ENST00000330295 SMPDL3BQ92485 455 aa13.79□□□□□ -0.2
CTHRC1-201ENST00000330295 ZDHHC11Q9H8X9 412 aa13.79□□□□□ -0.2
CTHRC1-201ENST00000330295 RAB6BQ9NRW1 208 aa13.79□□□□□ -0.2
CTHRC1-201ENST00000330295 ZDHHC3Q9NYG2 299 aa13.79□□□□□ -0.2
CTHRC1-201ENST00000330295 CIDEBQ9UHD4 219 aa13.79□□□□□ -0.2
CTHRC1-201ENST00000330295 RUVBL1Q9Y265 456 aaKnown RBP13.79□□□□□ -0.2
CTHRC1-201ENST00000330295 H0YGG7 62 aa13.78□□□□□ -0.2
CTHRC1-201ENST00000330295 FOXS1O43638 330 aa13.78□□□□□ -0.2
CTHRC1-201ENST00000330295 STATHP02808 62 aa13.78□□□□□ -0.2
CTHRC1-201ENST00000330295 ITGALP20701 1170 aa13.78□□□□□ -0.2
CTHRC1-201ENST00000330295 GDF10P55107 478 aa13.78□□□□□ -0.2
CTHRC1-201ENST00000330295 MLF1P58340 268 aa13.78□□□□□ -0.2
CTHRC1-201ENST00000330295 ARF3P61204 181 aaPredicted RBP13.78□□□□□ -0.2
CTHRC1-201ENST00000330295 CDH17Q12864 832 aa13.78□□□□□ -0.2
CTHRC1-201ENST00000330295 KCTD11Q693B1 232 aa13.78□□□□□ -0.2
CTHRC1-201ENST00000330295 SNX20Q7Z614 316 aa13.78□□□□□ -0.2
CTHRC1-201ENST00000330295 SPNS2Q8IVW8 549 aa13.78□□□□□ -0.2
CTHRC1-201ENST00000330295 ELMO1Q92556 727 aa13.78□□□□□ -0.2
CTHRC1-201ENST00000330295 LPAR4Q99677 370 aa13.78□□□□□ -0.2
CTHRC1-201ENST00000330295 CCL19Q99731 98 aa13.78□□□□□ -0.2
CTHRC1-201ENST00000330295 GORASP1Q9BQQ3 440 aa13.78□□□□□ -0.2
CTHRC1-201ENST00000330295 AMBRA1Q9C0C7 1298 aa13.78□□□□□ -0.2
CTHRC1-201ENST00000330295 DRC3Q9H069 523 aa13.78□□□□□ -0.2
CTHRC1-201ENST00000330295 TRMT1Q9NXH9 659 aaKnown RBP13.78□□□□□ -0.2
CTHRC1-201ENST00000330295 GOLGA6L10A0A0M3HER8 536 aa13.77□□□□□ -0.21
CTHRC1-201ENST00000330295 TLX2O43763 284 aaPredicted RBP13.77□□□□□ -0.21
CTHRC1-201ENST00000330295 APRTP07741 180 aa13.77□□□□□ -0.21
CTHRC1-201ENST00000330295 FAM157CP0CG43 387 aa13.77□□□□□ -0.21
CTHRC1-201ENST00000330295 PPIAP62937 165 aaKnown RBP13.77□□□□□ -0.21
CTHRC1-201ENST00000330295 SORDQ00796 357 aa13.77□□□□□ -0.21
CTHRC1-201ENST00000330295 USP10Q14694 798 aaKnown RBP13.77□□□□□ -0.21
CTHRC1-201ENST00000330295 HKDC1Q2TB90 917 aa13.77□□□□□ -0.21
CTHRC1-201ENST00000330295 SFT2D3Q587I9 215 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms