RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 NFATC3Q12968 1075 aa14□□□□□ -0.17
TPM3-206ENST00000330188 KEAP1Q14145 624 aa14□□□□□ -0.17
TPM3-206ENST00000330188 PAGE2BQ5JRK9 111 aa14□□□□□ -0.17
TPM3-206ENST00000330188 C10orf62Q5T681 223 aaPredicted RBP14□□□□□ -0.17
TPM3-206ENST00000330188 NAGSQ8N159 534 aa14□□□□□ -0.17
TPM3-206ENST00000330188 BPIFB6Q8NFQ5 453 aa14□□□□□ -0.17
TPM3-206ENST00000330188 WDR48Q8TAF3 677 aa14□□□□□ -0.17
TPM3-206ENST00000330188 SLC5A11Q8WWX8 675 aa14□□□□□ -0.17
TPM3-206ENST00000330188 MAL2Q969L2 176 aa14□□□□□ -0.17
TPM3-206ENST00000330188 ARMC5Q96C12 935 aa14□□□□□ -0.17
TPM3-206ENST00000330188 THAP11Q96EK4 314 aa14□□□□□ -0.17
TPM3-206ENST00000330188 TPD52L3Q96J77 140 aa14□□□□□ -0.17
TPM3-206ENST00000330188 C7orf34Q96L11 122 aa14□□□□□ -0.17
TPM3-206ENST00000330188 ITM2CQ9NQX7 267 aa14□□□□□ -0.17
TPM3-206ENST00000330188 GCM2O75603 506 aaPredicted RBP13.99□□□□□ -0.17
TPM3-206ENST00000330188 POP7O75817 140 aaKnown RBP13.99□□□□□ -0.17
TPM3-206ENST00000330188 KLHL18O94889 574 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 TGFB1P01137 390 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 GBAP04062 536 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 NTRK1P04629 796 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 POU2F2P09086 479 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 CCNA2P20248 432 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 MVDP53602 400 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 IL1RL1Q01638 556 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 MEF2AQ02078 507 aaPredicted RBP13.99□□□□□ -0.17
TPM3-206ENST00000330188 LRRC74AQ0VAA2 488 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 SIM2Q14190 667 aaPredicted RBP13.99□□□□□ -0.17
TPM3-206ENST00000330188 NFE2L1Q14494 772 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 ELAVL3Q14576 367 aaKnown RBP13.99□□□□□ -0.17
TPM3-206ENST00000330188 CRTC3Q6UUV7 619 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 NXPE4Q6UWF7 544 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 ZNF852Q6ZMS4 543 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 SFTPA1Q8IWL2 248 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 SETD9Q8NE22 299 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 OR4K1Q8NGD4 311 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 GOT1L1Q8NHS2 421 aaPredicted RBP13.99□□□□□ -0.17
TPM3-206ENST00000330188 MUL1Q969V5 352 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 ZNF514Q96K75 400 aaPredicted RBP13.99□□□□□ -0.17
TPM3-206ENST00000330188 NODALQ96S42 347 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 ZDHHC5Q9C0B5 715 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 OR51B5Q9H339 312 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 DPEP2Q9H4A9 486 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 GPATCH2Q9NW75 528 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 FAF1Q9UNN5 650 aaPredicted RBP13.99□□□□□ -0.17
TPM3-206ENST00000330188 PCYT1BQ9Y5K3 369 aaPredicted RBP13.99□□□□□ -0.17
TPM3-206ENST00000330188 AP1M2Q9Y6Q5 423 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 SAP18O00422 153 aaKnown RBP13.99□□□□□ -0.17
TPM3-206ENST00000330188 XPNPEP2O43895 674 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 DPM1O60762 260 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 JRKO75564 520 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 ANGPTL1O95841 491 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 FURINP09958 794 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 AQP1P29972 269 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 HBA1P69905 142 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 MC1RQ01726 317 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 ZNF234Q14588 700 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 HIST2H2ACQ16777 129 aaPredicted RBP13.99□□□□□ -0.17
TPM3-206ENST00000330188 TMEM52BQ4KMG9 183 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 HIST2H2AA3Q6FI13 130 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 LAIR1Q6GTX8 287 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 FAM83HQ6ZRV2 1179 aaPredicted RBP13.99□□□□□ -0.17
TPM3-206ENST00000330188 KIAA1958Q8N8K9 716 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 C11orf65Q8NCR3 313 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 OR2L2Q8NH16 312 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 TBC1D15Q8TC07 691 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 C16orf78Q8WTQ4 265 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 RAB2BQ8WUD1 216 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 TANKQ92844 425 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 REEP1Q9H902 201 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 PLGRKTQ9HBL7 147 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 CCDC177Q9NQR7 707 aaPredicted RBP13.99□□□□□ -0.17
TPM3-206ENST00000330188 THUMPD1Q9NXG2 353 aaKnown RBP13.99□□□□□ -0.17
TPM3-206ENST00000330188 DEC1Q9P2X7 70 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 GPR34Q9UPC5 381 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 SNX5Q9Y5X3 404 aa13.99□□□□□ -0.17
TPM3-206ENST00000330188 KIAA0100Q14667 2235 aaKnown RBP13.98□□□□□ -0.17
TPM3-206ENST00000330188 HEPACAM2A8MVW5 462 aa13.98□□□□□ -0.17
TPM3-206ENST00000330188 PTGES3LE9PB15 166 aa13.98□□□□□ -0.17
TPM3-206ENST00000330188 C5orf67F2Z3F1 127 aa13.98□□□□□ -0.17
TPM3-206ENST00000330188 M0QX08 132 aa13.98□□□□□ -0.17
TPM3-206ENST00000330188 SUV39H1O43463 412 aa13.98□□□□□ -0.17
TPM3-206ENST00000330188 FOXD2O60548 495 aaPredicted RBP13.98□□□□□ -0.17
TPM3-206ENST00000330188 NFATC1O95644 943 aa13.98□□□□□ -0.17
TPM3-206ENST00000330188 C6orf47O95873 294 aa13.98□□□□□ -0.17
TPM3-206ENST00000330188 ITIH1P19827 911 aa13.98□□□□□ -0.17
TPM3-206ENST00000330188 PDE7AQ13946 482 aa13.98□□□□□ -0.17
TPM3-206ENST00000330188 MPEG1Q2M385 716 aa13.98□□□□□ -0.17
TPM3-206ENST00000330188 COX20Q5RI15 118 aa13.98□□□□□ -0.17
TPM3-206ENST00000330188 C11orf96Q7Z7L8 435 aa13.98□□□□□ -0.17
TPM3-206ENST00000330188 B3GNT8Q7Z7M8 397 aa13.98□□□□□ -0.17
TPM3-206ENST00000330188 ZC3H7AQ8IWR0 971 aaKnown RBP13.98□□□□□ -0.17
TPM3-206ENST00000330188 C12orf76Q8N812 135 aaPredicted RBP13.98□□□□□ -0.17
TPM3-206ENST00000330188 SMG7Q92540 1137 aaKnown RBP13.98□□□□□ -0.17
TPM3-206ENST00000330188 FKBP10Q96AY3 582 aa13.98□□□□□ -0.17
TPM3-206ENST00000330188 PPP1R16AQ96I34 528 aa13.98□□□□□ -0.17
TPM3-206ENST00000330188 CSF3RQ99062 836 aa13.98□□□□□ -0.17
TPM3-206ENST00000330188 OR52A5Q9H2C5 316 aa13.98□□□□□ -0.17
TPM3-206ENST00000330188 GPN2Q9H9Y4 310 aaPredicted RBP13.98□□□□□ -0.17
TPM3-206ENST00000330188 ADPRHL2Q9NX46 363 aa13.98□□□□□ -0.17
TPM3-206ENST00000330188 RAPGEFL1Q9UHV5 662 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms