RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 WDR48Q8TAF3 677 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 FANK1Q8TC84 345 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 TRMT61AQ96FX7 289 aaKnown RBP8.1□□□□□ -1.11
SKA2-201ENST00000330137 OR2M2Q96R28 347 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 USB1Q9BQ65 265 aaKnown RBP8.1□□□□□ -1.11
SKA2-201ENST00000330137 PRRG3Q9BZD7 231 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 MED28Q9H204 178 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 TNKS2Q9H2K2 1166 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 EVA1BQ9NVM1 165 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 CLN6Q9NWW5 311 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 NUDT4Q9NZJ9 180 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 TRPM5Q9NZQ8 1165 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 PCDH10Q9P2E7 1040 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 PLEKHB1Q9UF11 243 aaPredicted RBP8.1□□□□□ -1.11
SKA2-201ENST00000330137 OR12D3Q9UGF7 316 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 CCL27Q9Y4X3 112 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 MFSD2BA6NFX1 497 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 LRRC14BA6NHZ5 514 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 CASC3O15234 703 aaKnown RBP8.1□□□□□ -1.11
SKA2-201ENST00000330137 OTCP00480 354 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 CYP17A1P05093 508 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 HSMCR30P0CW71 290 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 RPS12P25398 132 aaKnown RBP8.1□□□□□ -1.11
SKA2-201ENST00000330137 KDELR2P33947 212 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 ATP12AP54707 1039 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 WNT3AP56704 352 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 SP2Q02086 613 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 COX10Q12887 443 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 ZNF169Q14929 603 aaPredicted RBP8.1□□□□□ -1.11
SKA2-201ENST00000330137 FAM214AQ32MH5 1076 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 EML3Q32P44 896 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 FAM174BQ3ZCQ3 159 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 IQCCQ4KMZ1 466 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 DBX2Q6ZNG2 339 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 USP50Q70EL3 339 aaPredicted RBP8.1□□□□□ -1.11
SKA2-201ENST00000330137 TRIM46Q7Z4K8 759 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 ADGRF3Q8IZF5 1079 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 OR6B3Q8NGW1 331 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 UBE2FQ969M7 185 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 UPRTQ96BW1 309 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 ZBED6CLQ96FA7 236 aaPredicted RBP8.1□□□□□ -1.11
SKA2-201ENST00000330137 WBP1Q96G27 269 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 SCMH1Q96GD3 660 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 TRIM62Q9BVG3 475 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 ZNF408Q9H9D4 720 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 BAIAP2Q9UQB8 552 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 COMMD10Q9Y6G5 202 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 GBF1Q92538 1859 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 A0A1B0GTL3 188 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 LOC285095A0A1B0GVY8 99 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 A0A1W2PPL8 197 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 A8MXK9 166 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 GFRA2O00451 464 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 GMDSO60547 372 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 PRAMEF1O95521 474 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 CSF2P04141 144 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 PEPDP12955 493 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 AZGP1P25311 298 aaKnown RBP8.09□□□□□ -1.11
SKA2-201ENST00000330137 SLC6A1P30531 599 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 EVI2BP34910 448 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 PNPLA4P41247 253 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 MAP2K6P52564 334 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 HTRA3P83110 453 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 HOXC5Q00444 222 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 ADIGQ0VDE8 80 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 C1DQ13901 141 aaKnown RBP8.09□□□□□ -1.11
SKA2-201ENST00000330137 DSG2Q14126 1118 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 DUSP6Q16828 381 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 VMACQ2NL98 169 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 TMEM201Q5SNT2 666 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 AFMIDQ63HM1 303 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 KRT74Q7RTS7 529 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 PIM3Q86V86 326 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 Q8N402 240 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 NETO2Q8NC67 525 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 METTL6Q8TCB7 284 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 EXT2Q93063 718 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 MYLPFQ96A32 169 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 NXPE2Q96DL1 559 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 IMP4Q96G21 291 aaKnown RBP8.09□□□□□ -1.11
SKA2-201ENST00000330137 OR52E6Q96RD3 313 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 RTP3Q9BQQ7 232 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 COLEC11Q9BWP8 271 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 IMPAD1Q9NX62 359 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 MS4A12Q9NXJ0 267 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 RDH8Q9NYR8 311 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 ERAP1Q9NZ08 941 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 COPZ2Q9P299 210 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 ZNF112Q9UJU3 913 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 TMCC3Q9ULS5 477 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 ADAMTS5Q9UNA0 930 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 POLR3HQ9Y535 204 aaPredicted RBP8.09□□□□□ -1.11
SKA2-201ENST00000330137 NME7Q9Y5B8 376 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 ACTL7AQ9Y615 435 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 KCNMB2Q9Y691 235 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 CFAP20Q9Y6A4 193 aaKnown RBP8.09□□□□□ -1.11
SKA2-201ENST00000330137 GLYATL1P3A0A0U1RQE8 302 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 PQLC2LA1A4F0 135 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 MPTX1A8MV57 137 aa8.09□□□□□ -1.11
SKA2-201ENST00000330137 TPST2O60704 377 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms