RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 CHRNB1P11230 501 aa14.31□□□□□ -0.12
TPM3-205ENST00000328159 EFNA1P20827 205 aaPredicted RBP14.31□□□□□ -0.12
TPM3-205ENST00000328159 RPL3P39023 403 aaKnown RBP14.31□□□□□ -0.12
TPM3-205ENST00000328159 HSPA13P48723 471 aa14.31□□□□□ -0.12
TPM3-205ENST00000328159 PRKCQQ04759 706 aa14.31□□□□□ -0.12
TPM3-205ENST00000328159 C2orf80Q0P641 193 aa14.31□□□□□ -0.12
TPM3-205ENST00000328159 MED21Q13503 144 aa14.31□□□□□ -0.12
TPM3-205ENST00000328159 FAM71E1Q6IPT2 247 aa14.31□□□□□ -0.12
TPM3-205ENST00000328159 R3HCC1LQ7Z5L2 792 aaKnown RBP14.31□□□□□ -0.12
TPM3-205ENST00000328159 TMEM145Q8NBT3 493 aa14.31□□□□□ -0.12
TPM3-205ENST00000328159 REXO5Q96IC2 774 aaKnown RBP14.31□□□□□ -0.12
TPM3-205ENST00000328159 SEPHS2Q99611 448 aa14.31□□□□□ -0.12
TPM3-205ENST00000328159 CIB1Q99828 191 aa14.31□□□□□ -0.12
TPM3-205ENST00000328159 CENPKQ9BS16 269 aa14.31□□□□□ -0.12
TPM3-205ENST00000328159 SORBS1Q9BX66 1292 aaKnown RBP14.31□□□□□ -0.12
TPM3-205ENST00000328159 C6orf106Q9H6K1 298 aaPredicted RBP14.31□□□□□ -0.12
TPM3-205ENST00000328159 RAB26Q9ULW5 256 aa14.31□□□□□ -0.12
TPM3-205ENST00000328159 CYP8B1Q9UNU6 501 aa14.31□□□□□ -0.12
TPM3-205ENST00000328159 ERVK-11Q9UQG0 969 aa14.31□□□□□ -0.12
TPM3-205ENST00000328159 V9GYQ6 96 aa14.31□□□□□ -0.12
TPM3-205ENST00000328159 PLXND1Q9Y4D7 1925 aa14.31□□□□□ -0.12
TPM3-205ENST00000328159 SPTBN5Q9NRC6 3674 aaKnown RBP14.3□□□□□ -0.12
TPM3-205ENST00000328159 FAM149AA5PLN7 773 aa14.3□□□□□ -0.12
TPM3-205ENST00000328159 EIF4E1BA6NMX2 242 aaKnown RBP14.3□□□□□ -0.12
TPM3-205ENST00000328159 TXNDC9O14530 226 aa14.3□□□□□ -0.12
TPM3-205ENST00000328159 OR1F1O43749 312 aa14.3□□□□□ -0.12
TPM3-205ENST00000328159 PRICKLE3O43900 615 aaPredicted RBP14.3□□□□□ -0.12
TPM3-205ENST00000328159 RASGRP1O95267 797 aa14.3□□□□□ -0.12
TPM3-205ENST00000328159 IGHV4-34P06331 123 aa14.3□□□□□ -0.12
TPM3-205ENST00000328159 FURINP09958 794 aa14.3□□□□□ -0.12
TPM3-205ENST00000328159 ENGP17813 658 aa14.3□□□□□ -0.12
TPM3-205ENST00000328159 CCR5P51681 352 aa14.3□□□□□ -0.12
TPM3-205ENST00000328159 TAS2R50P59544 299 aa14.3□□□□□ -0.12
TPM3-205ENST00000328159 SRP54P61011 504 aaKnown RBP14.3□□□□□ -0.12
TPM3-205ENST00000328159 LRRC74AQ0VAA2 488 aa14.3□□□□□ -0.12
TPM3-205ENST00000328159 SLC14A1Q13336 389 aa14.3□□□□□ -0.12
TPM3-205ENST00000328159 PDE7AQ13946 482 aa14.3□□□□□ -0.12
TPM3-205ENST00000328159 TCEA2Q15560 299 aa14.3□□□□□ -0.12
TPM3-205ENST00000328159 ALG11Q2TAA5 492 aa14.3□□□□□ -0.12
TPM3-205ENST00000328159 ZNF385BQ569K4 471 aa14.3□□□□□ -0.12
TPM3-205ENST00000328159 KIAA0895LQ68EN5 471 aa14.3□□□□□ -0.12
TPM3-205ENST00000328159 ZNF852Q6ZMS4 543 aa14.3□□□□□ -0.12
TPM3-205ENST00000328159 IKBIPQ70UQ0 350 aa14.3□□□□□ -0.12
TPM3-205ENST00000328159 ADCK2Q7Z695 626 aa14.3□□□□□ -0.12
TPM3-205ENST00000328159 OR52E4Q8NGH9 312 aa14.3□□□□□ -0.12
TPM3-205ENST00000328159 GATA6Q92908 595 aa14.3□□□□□ -0.12
TPM3-205ENST00000328159 FAM162AQ96A26 154 aa14.3□□□□□ -0.12
TPM3-205ENST00000328159 CENPNQ96H22 339 aaPredicted RBP14.3□□□□□ -0.12
TPM3-205ENST00000328159 PHF12Q96QT6 1004 aa14.3□□□□□ -0.12
TPM3-205ENST00000328159 F2RL3Q96RI0 385 aa14.3□□□□□ -0.12
TPM3-205ENST00000328159 TMEM168Q9H0V1 697 aa14.3□□□□□ -0.12
TPM3-205ENST00000328159 BATF3Q9NR55 127 aa14.3□□□□□ -0.12
TPM3-205ENST00000328159 PCOLCE2Q9UKZ9 415 aa14.3□□□□□ -0.12
TPM3-205ENST00000328159 PNMA8BQ9ULN7 279 aaPredicted RBP14.3□□□□□ -0.12
TPM3-205ENST00000328159 AK5Q9Y6K8 562 aa14.3□□□□□ -0.12
TPM3-205ENST00000328159 IGKV1-8A0A0C4DH67 115 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 A0A1W2PPC1 479 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 SAC3D1A6NKF1 404 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 CHURC1-FNTBB4DL54 471 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 PRAMEF26H0Y7S4 382 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 RNASET2O00584 256 aaKnown RBP14.29□□□□□ -0.12
TPM3-205ENST00000328159 PLPP1O14494 284 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 TOR1BO14657 336 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 C1QCP02747 245 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 ZCCHC18P0CG32 403 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 NDUFS1P28331 727 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 TPP2P29144 1249 aaPredicted RBP14.29□□□□□ -0.12
TPM3-205ENST00000328159 ACTR1BP42025 376 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 ACTR1AP61163 376 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 ABATP80404 500 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 MRPS35P82673 323 aaKnown RBP14.29□□□□□ -0.12
TPM3-205ENST00000328159 MC1RQ01726 317 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 ATP6AP1Q15904 470 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 Q6ZSR6 202 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 SYT13Q7L8C5 426 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 ZNF551Q7Z340 670 aaPredicted RBP14.29□□□□□ -0.12
TPM3-205ENST00000328159 SERPINA11Q86U17 422 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 CCL4L1Q8NHW4 92 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 NCLNQ969V3 563 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 PPCDCQ96CD2 204 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 MTERF3Q96E29 417 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 TOE1Q96GM8 510 aaKnown RBP14.29□□□□□ -0.12
TPM3-205ENST00000328159 RNF145Q96MT1 663 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 SLC29A1Q99808 456 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 ZNF717Q9BY31 904 aaPredicted RBP14.29□□□□□ -0.12
TPM3-205ENST00000328159 Q9H521 79 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 MRPS30Q9NP92 439 aaKnown RBP14.29□□□□□ -0.12
TPM3-205ENST00000328159 ATAD3AQ9NVI7 634 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.29□□□□□ -0.12
TPM3-205ENST00000328159 FANCMQ8IYD8 2048 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 TRBC2A0A5B9 178 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 MAGEA13PA6NCF6 341 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 DENRO43583 198 aaKnown RBP14.29□□□□□ -0.12
TPM3-205ENST00000328159 LCMT2O60294 686 aaKnown RBP14.29□□□□□ -0.12
TPM3-205ENST00000328159 CREG1O75629 220 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 SNRNP200O75643 2136 aaKnown RBP14.29□□□□□ -0.12
TPM3-205ENST00000328159 LDLRP01130 860 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 IL3P08700 152 aa14.29□□□□□ -0.12
TPM3-205ENST00000328159 UBTFL6P0CB48 400 aaPredicted RBP14.29□□□□□ -0.12
TPM3-205ENST00000328159 RAP2AP10114 183 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms