RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 GTF2A2P52657 109 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 POU6F2P78424 691 aaPredicted RBP6.85□□□□□ -1.31
SMC1A-201ENST00000322213 SF3A2Q15428 464 aaKnown RBP6.85□□□□□ -1.31
SMC1A-201ENST00000322213 BCL2A1Q16548 175 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 METTL11BQ5VVY1 283 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 ATG9BQ674R7 924 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 PAPD5Q8NDF8 572 aaKnown RBP6.85□□□□□ -1.31
SMC1A-201ENST00000322213 DNAJB3Q8WWF6 145 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 TRIM43Q96BQ3 446 aaPredicted RBP6.85□□□□□ -1.31
SMC1A-201ENST00000322213 APOLD1Q96LR9 279 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 GPR21Q99679 349 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 FN3KQ9H479 309 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 ZNF408Q9H9D4 720 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 COQ3Q9NZJ6 369 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 UGT2A1Q9Y4X1 527 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 SGCEO43556 437 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 RPS17P08708 135 aaKnown RBP6.85□□□□□ -1.31
SMC1A-201ENST00000322213 EMX2Q04743 252 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 SETMARQ53H47 684 aaPredicted RBP6.85□□□□□ -1.31
SMC1A-201ENST00000322213 CRB2Q5IJ48 1285 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 STEAP3Q658P3 488 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 RAP1GAP2Q684P5 730 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 SMARCD3Q6STE5 483 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 C3P1Q6ZMU1 363 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 JAZF1Q86VZ6 243 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 RAVER1Q8IY67 606 aaKnown RBP6.85□□□□□ -1.31
SMC1A-201ENST00000322213 HS3ST5Q8IZT8 346 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 BRSK1Q8TDC3 778 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 CDADC1Q9BWV3 514 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 EBPLQ9BY08 206 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 DERL2Q9GZP9 239 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 METTL8Q9H825 291 aaKnown RBP6.85□□□□□ -1.31
SMC1A-201ENST00000322213 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.85□□□□□ -1.316e-7■■□□□ 13.7
SMC1A-201ENST00000322213 TRPV2Q9Y5S1 764 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 SSC5DA1L4H1 1573 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 CRTAPO75718 401 aaPredicted RBP6.85□□□□□ -1.31
SMC1A-201ENST00000322213 GATBO75879 557 aaKnown RBP6.85□□□□□ -1.31
SMC1A-201ENST00000322213 OAZ2O95190 189 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 KHKP50053 298 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 PIGFQ07326 219 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 CDK5R2Q13319 367 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 INTS6LQ5JSJ4 861 aaKnown RBP6.85□□□□□ -1.31
SMC1A-201ENST00000322213 PRAMEF13Q5VWM6 474 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 C9orf57Q5W0N0 161 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 ZDHHC20Q5W0Z9 365 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 C22orf42Q6IC83 251 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 FAM151BQ6UXP7 276 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 BEND5Q7L4P6 421 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 REPS2Q8NFH8 660 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 FAM163AQ96GL9 167 aaPredicted RBP6.85□□□□□ -1.31
SMC1A-201ENST00000322213 RBCK1Q9BYM8 510 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 ERVMER34-1Q9H9K5 563 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 NTN4Q9HB63 628 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 SCP2D1Q9UJQ7 156 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 ZNF780BQ9Y6R6 833 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.84□□□□□ -1.31
SMC1A-201ENST00000322213 GOT2P00505 430 aaKnown RBP6.84□□□□□ -1.31
SMC1A-201ENST00000322213 FGBP02675 491 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 MAN2A2P49641 1150 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 APLP1P51693 650 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 PLD1Q13393 1074 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 RCAN2Q14206 197 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 LARS2Q15031 903 aaKnown RBP6.84□□□□□ -1.31
SMC1A-201ENST00000322213 UGCGQ16739 394 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 EIF2S3LQ2VIR3 472 aaKnown RBP6.84□□□□□ -1.31
SMC1A-201ENST00000322213 FAM205BPQ63HN1 556 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 ENPP6Q6UWR7 440 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 CERS6Q6ZMG9 384 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 DENND1CQ8IV53 801 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 GHDCQ8N2G8 530 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 YIPF7Q8N8F6 280 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 NAT16Q8N8M0 369 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 BEST4Q8NFU0 473 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 TTLL2Q9BWV7 592 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 BTBD1Q9H0C5 482 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 MMP28Q9H239 520 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 MFSD1Q9H3U5 465 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 CAPN10Q9HC96 672 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 HCN4Q9Y3Q4 1203 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 PRSS51A0A1B0GVH4 220 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 ECI2O75521 394 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 CATP04040 527 aaKnown RBP6.84□□□□□ -1.31
SMC1A-201ENST00000322213 BCL2L1Q07817 233 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 HSPA14Q0VDF9 509 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 HSDL2Q6YN16 418 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 CPNE8Q86YQ8 564 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 PHACTR4Q8IZ21 702 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 ZNF382Q96SR6 550 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 ZNF471Q9BX82 626 aaPredicted RBP6.84□□□□□ -1.31
SMC1A-201ENST00000322213 TMPRSS4Q9NRS4 437 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 OLAHQ9NV23 265 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 C14orf105Q9NVL8 296 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 EXOSC1Q9Y3B2 195 aaKnown RBP6.84□□□□□ -1.31
SMC1A-201ENST00000322213 GRXCR2A6NFK2 248 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 LYRM1O43325 122 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 NRIP1P48552 1158 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 PNLIPRP1P54315 467 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 MS4A2Q01362 244 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 TCEAL5Q5H9L2 206 aa6.84□□□□□ -1.31
SMC1A-201ENST00000322213 MTSS1LQ765P7 747 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms