RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 NATD1Q8N6N6 113 aa17.09■□□□□ 0.33
RAB39A-201ENST00000320578 C16orf78Q8WTQ4 265 aa17.09■□□□□ 0.33
RAB39A-201ENST00000320578 CENPKQ9BS16 269 aa17.09■□□□□ 0.33
RAB39A-201ENST00000320578 IER2Q9BTL4 223 aa17.09■□□□□ 0.33
RAB39A-201ENST00000320578 FOXQ1Q9C009 403 aa17.09■□□□□ 0.33
RAB39A-201ENST00000320578 KAT8Q9H7Z6 458 aaKnown RBP17.09■□□□□ 0.33
RAB39A-201ENST00000320578 PRM3Q9NNZ6 103 aa17.09■□□□□ 0.33
RAB39A-201ENST00000320578 POT1Q9NUX5 634 aa17.09■□□□□ 0.33
RAB39A-201ENST00000320578 GMPR2Q9P2T1 348 aaKnown RBP17.09■□□□□ 0.33
RAB39A-201ENST00000320578 RIMS3Q9UJD0 308 aa17.09■□□□□ 0.33
RAB39A-201ENST00000320578 PCDHGA2Q9Y5H1 932 aa17.09■□□□□ 0.33
RAB39A-201ENST00000320578 RNASET2O00584 256 aaKnown RBP17.08■□□□□ 0.33
RAB39A-201ENST00000320578 KLHL18O94889 574 aa17.08■□□□□ 0.33
RAB39A-201ENST00000320578 DDX5P17844 614 aaKnown RBP17.08■□□□□ 0.33
RAB39A-201ENST00000320578 PEBP1P30086 187 aaKnown RBP17.08■□□□□ 0.33
RAB39A-201ENST00000320578 GRIA3P42263 894 aa17.08■□□□□ 0.33
RAB39A-201ENST00000320578 MTPNP58546 118 aa17.08■□□□□ 0.33
RAB39A-201ENST00000320578 SELPLGQ14242 412 aa17.08■□□□□ 0.33
RAB39A-201ENST00000320578 ZIC1Q15915 447 aa17.08■□□□□ 0.33
RAB39A-201ENST00000320578 MUM1Q2TAK8 710 aa17.08■□□□□ 0.33
RAB39A-201ENST00000320578 OGFRL1Q5TC84 451 aaPredicted RBP17.08■□□□□ 0.33
RAB39A-201ENST00000320578 ZNF425Q6IV72 752 aa17.08■□□□□ 0.33
RAB39A-201ENST00000320578 CYP2R1Q6VVX0 501 aa17.08■□□□□ 0.33
RAB39A-201ENST00000320578 CALHM3Q86XJ0 350 aa17.08■□□□□ 0.33
RAB39A-201ENST00000320578 SIX5Q8N196 739 aa17.08■□□□□ 0.33
RAB39A-201ENST00000320578 MFSD2AQ8NA29 543 aa17.08■□□□□ 0.33
RAB39A-201ENST00000320578 CATSPER1Q8NEC5 780 aa17.08■□□□□ 0.33
RAB39A-201ENST00000320578 CREB3L4Q8TEY5 395 aa17.08■□□□□ 0.33
RAB39A-201ENST00000320578 GFM2Q969S9 779 aaKnown RBP17.08■□□□□ 0.33
RAB39A-201ENST00000320578 ZNF764Q96H86 408 aaPredicted RBP17.08■□□□□ 0.33
RAB39A-201ENST00000320578 THUMPD3Q9BV44 507 aaKnown RBP17.08■□□□□ 0.33
RAB39A-201ENST00000320578 GORASP2Q9H8Y8 452 aa17.08■□□□□ 0.33
RAB39A-201ENST00000320578 UNC80Q8N2C7 3258 aa17.08■□□□□ 0.32
RAB39A-201ENST00000320578 SCAMP1O15126 338 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 OR1F1O43749 312 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 NDUFS2O75306 463 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 LAMP1P11279 417 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 PIM1P11309 404 aaPredicted RBP17.07■□□□□ 0.32
RAB39A-201ENST00000320578 ACADSP16219 412 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 ATXN3P54252 364 aaPredicted RBP17.07■□□□□ 0.32
RAB39A-201ENST00000320578 TRA2BP62995 288 aaKnown RBP17.07■□□□□ 0.32
RAB39A-201ENST00000320578 HKDC1Q2TB90 917 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 PARGQ86W56 976 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 RBM12BQ8IXT5 1001 aaKnown RBP17.07■□□□□ 0.32
RAB39A-201ENST00000320578 ADGRF3Q8IZF5 1079 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 DEFB123Q8N688 67 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 WDR48Q8TAF3 677 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 RGMAQ96B86 450 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 SLCO4A1Q96BD0 722 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 ZNF184Q99676 751 aaPredicted RBP17.07■□□□□ 0.32
RAB39A-201ENST00000320578 INPP5KQ9BT40 448 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 ZNF717Q9BY31 904 aaPredicted RBP17.07■□□□□ 0.32
RAB39A-201ENST00000320578 KLHL4Q9C0H6 718 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 SRMSQ9H3Y6 488 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 SLC6A20Q9NP91 592 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 TAAR2Q9P1P5 351 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 EGFL7Q9UHF1 273 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 EXO1Q9UQ84 846 aaKnown RBP17.07■□□□□ 0.32
RAB39A-201ENST00000320578 AP1M2Q9Y6Q5 423 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 PRAMEF33A0A0G2JMD5 474 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 TCRBV5S2A0A599 114 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 FAM220BPB1ANY3 271 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 PLPP1O14494 284 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 CAPN5O15484 640 aaPredicted RBP17.07■□□□□ 0.32
RAB39A-201ENST00000320578 KLK1P06870 262 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 FURINP09958 794 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 GGT1P19440 569 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 TPP2P29144 1249 aaPredicted RBP17.07■□□□□ 0.32
RAB39A-201ENST00000320578 BSGP35613 385 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 OR4D2P58180 307 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 UBE2IP63279 158 aaKnown RBP17.07■□□□□ 0.32
RAB39A-201ENST00000320578 ABHD18Q0P651 414 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 SF1Q15637 639 aaKnown RBP17.07■□□□□ 0.32
RAB39A-201ENST00000320578 IFNEQ86WN2 208 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 SPPL2CQ8IUH8 684 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 PAPD5Q8NDF8 572 aaKnown RBP17.07■□□□□ 0.32
RAB39A-201ENST00000320578 TRPV3Q8NET8 790 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 ADCY4Q8NFM4 1077 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 OR2T12Q8NG77 320 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 GOT1L1Q8NHS2 421 aaPredicted RBP17.07■□□□□ 0.32
RAB39A-201ENST00000320578 TPSD1Q9BZJ3 242 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 TRIM8Q9BZR9 551 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 TBC1D17Q9HA65 648 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 SPHK1Q9NYA1 384 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 ANKMY1Q9P2S6 941 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 INVSQ9Y283 1065 aa17.07■□□□□ 0.32
RAB39A-201ENST00000320578 LRP4O75096 1905 aa17.06■□□□□ 0.32
RAB39A-201ENST00000320578 DHRS12A0PJE2 317 aa17.06■□□□□ 0.32
RAB39A-201ENST00000320578 HNRNPRO43390 633 aaKnown RBP17.06■□□□□ 0.32
RAB39A-201ENST00000320578 LCMT2O60294 686 aaKnown RBP17.06■□□□□ 0.32
RAB39A-201ENST00000320578 SH3BGRLO75368 114 aa17.06■□□□□ 0.32
RAB39A-201ENST00000320578 GMNNO75496 209 aa17.06■□□□□ 0.32
RAB39A-201ENST00000320578 ATP6V1C1P21283 382 aa17.06■□□□□ 0.32
RAB39A-201ENST00000320578 IL10P22301 178 aa17.06■□□□□ 0.32
RAB39A-201ENST00000320578 PPIBP23284 216 aaKnown RBP17.06■□□□□ 0.32
RAB39A-201ENST00000320578 PSMA4P25789 261 aaKnown RBP17.06■□□□□ 0.32
RAB39A-201ENST00000320578 GZMMP51124 257 aa17.06■□□□□ 0.32
RAB39A-201ENST00000320578 PLIN5Q00G26 463 aa17.06■□□□□ 0.32
RAB39A-201ENST00000320578 RELAQ04206 551 aa17.06■□□□□ 0.32
RAB39A-201ENST00000320578 TAF11Q15544 211 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms