RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 METTL21CQ5VZV1 264 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 FRMPD2BQ6IN97 320 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 OGFOD2Q6N063 350 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 RBM44Q6ZP01 1051 aaKnown RBP12.99□□□□□ -0.33
PRPF18-201ENST00000320054 CHSY3Q70JA7 882 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 ZFAND4Q86XD8 727 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 RNF175Q8N4F7 328 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 ZNF655Q8N720 491 aaPredicted RBP12.99□□□□□ -0.33
PRPF18-201ENST00000320054 ANKS4BQ8N8V4 417 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 DEFB124Q8NES8 71 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 SLC13A3Q8WWT9 602 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 PPP1R36Q96LQ0 422 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 CCDC74BQ96LY2 380 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 TMEM74Q96NL1 305 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 FCRL4Q96PJ5 515 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 OR52B2Q96RD2 323 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 EBF4Q9BQW3 602 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 SLC6A16Q9GZN6 736 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 AKTIPQ9H8T0 292 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 C1orf109Q9NX04 203 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 SIRT5Q9NXA8 310 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 SLC12A4Q9UP95 1085 aa12.99□□□□□ -0.33
PRPF18-201ENST00000320054 KIF26BQ2KJY2 2108 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 SCN3AQ9NY46 2000 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 LOC105369274A0A096LPK9 316 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 LOC102723532A0A0G2JNH3 316 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 GOLGA8QA0A0J9YX86 632 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 GOLGA8OA6NCC3 632 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 LRIT2A6NDA9 550 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 A8MU76 341 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 GOLGA8NF8WBI6 632 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 TMX2-CTNND1H3BSU7 103 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 DKK1O94907 266 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 ETHE1O95571 254 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 TGFB1P01137 390 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 LBPP18428 481 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 CCKBRP32239 447 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 SEPHS1P49903 392 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 STXBP1P61764 594 aaKnown RBP12.98□□□□□ -0.33
PRPF18-201ENST00000320054 IRX1P78414 480 aaPredicted RBP12.98□□□□□ -0.33
PRPF18-201ENST00000320054 RGS1Q08116 209 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 TBL3Q12788 808 aaKnown RBP12.98□□□□□ -0.33
PRPF18-201ENST00000320054 HYAL2Q12891 473 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 MAD2L1Q13257 205 aaPredicted RBP12.98□□□□□ -0.33
PRPF18-201ENST00000320054 NR6A1Q15406 480 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 LSM12Q3MHD2 195 aaKnown RBP12.98□□□□□ -0.33
PRPF18-201ENST00000320054 TCTE1Q5JU00 501 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 C6orf136Q5SQH8 315 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 CDCP2Q5VXM1 449 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 SPATA19Q7Z5L4 167 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 PARP9Q8IXQ6 854 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 KIAA2013Q8IYS2 634 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 OR4N4Q8N0Y3 316 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 FCRL1Q96LA6 429 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 RILPQ96NA2 401 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 CENPKQ9BS16 269 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 NLNQ9BYT8 704 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 OR51B5Q9H339 312 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 LRTM1Q9HBL6 345 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 TMED5Q9Y3A6 229 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 CEP250Q9BV73 2442 aa12.98□□□□□ -0.33
PRPF18-201ENST00000320054 URADA6NGE7 173 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 SLC30A4O14863 429 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 ZSCAN9O15535 394 aaPredicted RBP12.97□□□□□ -0.33
PRPF18-201ENST00000320054 NDUFS4O43181 175 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 HCRTR1O43613 425 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 PEX11AO75192 247 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 SERPIND1P05546 499 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 ACPPP15309 386 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 PCSK2P16519 638 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 HNRNPH1P31943 449 aaKnown RBP12.97□□□□□ -0.33
PRPF18-201ENST00000320054 TSFMP43897 325 aaKnown RBP12.97□□□□□ -0.33
PRPF18-201ENST00000320054 PDX1P52945 283 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 EMP3P54852 163 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 VSX2P58304 361 aaPredicted RBP12.97□□□□□ -0.33
PRPF18-201ENST00000320054 ERVK-8P63133 956 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 INSM1Q01101 510 aaPredicted RBP12.97□□□□□ -0.33
PRPF18-201ENST00000320054 ACY1Q03154 408 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 EMX2Q04743 252 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 SF3A3Q12874 501 aaKnown RBP eCLIP12.97□□□□□ -0.33
PRPF18-201ENST00000320054 KIAA0040Q15053 153 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 AP5B1Q2VPB7 878 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 PRTGQ2VWP7 1150 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 SPIN4Q56A73 249 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 TOR1AIP1Q5JTV8 583 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 SPDYAQ5MJ70 313 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 PHF19Q5T6S3 580 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 NXNQ6DKJ4 435 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 CACNA2D3Q8IZS8 1091 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 METTL4Q8N3J2 472 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 CSNK1A1LQ8N752 337 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 CCDC197Q8NCU1 140 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 SRFBP1Q8NEF9 429 aaKnown RBP12.97□□□□□ -0.33
PRPF18-201ENST00000320054 CHTF18Q8WVB6 975 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 GAL3ST3Q96A11 431 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 RGMAQ96B86 450 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 MS4A6EQ96DS6 147 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 C11orf24Q96F05 449 aaPredicted RBP12.97□□□□□ -0.33
PRPF18-201ENST00000320054 F2RL3Q96RI0 385 aa12.97□□□□□ -0.33
PRPF18-201ENST00000320054 PRM3Q9NNZ6 103 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms