RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 OR2W5A6NFC9 320 aa13.39□□□□□ -0.27
RPP40-201ENST00000319533 CCDC188H7C350 402 aa13.39□□□□□ -0.27
RPP40-201ENST00000319533 SGK494L7N484 410 aa13.39□□□□□ -0.27
RPP40-201ENST00000319533 DNALI1O14645 258 aaPredicted RBP13.39□□□□□ -0.27
RPP40-201ENST00000319533 MLYCDO95822 493 aa13.39□□□□□ -0.27
RPP40-201ENST00000319533 STATHP02808 62 aa13.39□□□□□ -0.27
RPP40-201ENST00000319533 IL1RNP18510 177 aa13.39□□□□□ -0.27
RPP40-201ENST00000319533 MAGEA3P43357 314 aa13.39□□□□□ -0.27
RPP40-201ENST00000319533 SMSP52788 366 aa13.39□□□□□ -0.27
RPP40-201ENST00000319533 TBPL1P62380 186 aa13.39□□□□□ -0.27
RPP40-201ENST00000319533 DR1Q01658 176 aa13.39□□□□□ -0.27
RPP40-201ENST00000319533 RHAGQ02094 409 aa13.39□□□□□ -0.27
RPP40-201ENST00000319533 CTBP1Q13363 440 aa13.39□□□□□ -0.27
RPP40-201ENST00000319533 OR1C1Q15619 314 aa13.39□□□□□ -0.27
RPP40-201ENST00000319533 FCRLBQ6BAA4 426 aa13.39□□□□□ -0.27
RPP40-201ENST00000319533 UBE2R2Q712K3 238 aaPredicted RBP13.39□□□□□ -0.27
RPP40-201ENST00000319533 PIWIL4Q7Z3Z4 852 aaKnown RBP13.39□□□□□ -0.27
RPP40-201ENST00000319533 SIAH3Q8IW03 269 aa13.39□□□□□ -0.27
RPP40-201ENST00000319533 AFAP1L2Q8N4X5 818 aa13.39□□□□□ -0.27
RPP40-201ENST00000319533 CCDC138Q96M89 665 aa13.39□□□□□ -0.27
RPP40-201ENST00000319533 FRMD6Q96NE9 622 aa13.39□□□□□ -0.27
RPP40-201ENST00000319533 OR1F2PQ96R84 312 aa13.39□□□□□ -0.27
RPP40-201ENST00000319533 GPR21Q99679 349 aa13.39□□□□□ -0.27
RPP40-201ENST00000319533 UTP23Q9BRU9 249 aaKnown RBP13.39□□□□□ -0.27
RPP40-201ENST00000319533 CCDC68Q9H2F9 335 aa13.39□□□□□ -0.27
RPP40-201ENST00000319533 FBXO6Q9NRD1 293 aaPredicted RBP13.39□□□□□ -0.27
RPP40-201ENST00000319533 LANCL2Q9NS86 450 aa13.39□□□□□ -0.27
RPP40-201ENST00000319533 ABCF3Q9NUQ8 709 aa13.39□□□□□ -0.27
RPP40-201ENST00000319533 HCN3Q9P1Z3 774 aa13.39□□□□□ -0.27
RPP40-201ENST00000319533 SH3BGRL2Q9UJC5 107 aa13.39□□□□□ -0.27
RPP40-201ENST00000319533 TINAGQ9UJW2 476 aa13.39□□□□□ -0.27
RPP40-201ENST00000319533 SLC22A7Q9Y694 548 aa13.39□□□□□ -0.27
RPP40-201ENST00000319533 HIVEP1P15822 2718 aa13.39□□□□□ -0.27
RPP40-201ENST00000319533 C2CD3Q4AC94 2353 aa13.38□□□□□ -0.27
RPP40-201ENST00000319533 MAGEB17A8MXT2 336 aa13.38□□□□□ -0.27
RPP40-201ENST00000319533 KIF2AO00139 706 aaPredicted RBP13.38□□□□□ -0.27
RPP40-201ENST00000319533 LCMT2O60294 686 aaKnown RBP13.38□□□□□ -0.27
RPP40-201ENST00000319533 MAN1A2O60476 641 aa13.38□□□□□ -0.27
RPP40-201ENST00000319533 NEURL1O76050 574 aa13.38□□□□□ -0.27
RPP40-201ENST00000319533 CD46P15529 392 aa13.38□□□□□ -0.27
RPP40-201ENST00000319533 EEF1DP29692 281 aaKnown RBP13.38□□□□□ -0.27
RPP40-201ENST00000319533 SLC1A2P43004 574 aa13.38□□□□□ -0.27
RPP40-201ENST00000319533 RIPPLY3P57055 190 aa13.38□□□□□ -0.27
RPP40-201ENST00000319533 TIAL1Q01085 375 aaKnown RBP eCLIP13.38□□□□□ -0.27
RPP40-201ENST00000319533 ALDH6A1Q02252 535 aaKnown RBP13.38□□□□□ -0.27
RPP40-201ENST00000319533 CDSNQ15517 529 aa13.38□□□□□ -0.27
RPP40-201ENST00000319533 MFSD4BQ5TF39 518 aa13.38□□□□□ -0.27
RPP40-201ENST00000319533 SPINK14Q6IE38 97 aa13.38□□□□□ -0.27
RPP40-201ENST00000319533 PAPD4Q6PIY7 484 aaKnown RBP13.38□□□□□ -0.27
RPP40-201ENST00000319533 ASPGQ86U10 573 aa13.38□□□□□ -0.27
RPP40-201ENST00000319533 CPNE9Q8IYJ1 553 aa13.38□□□□□ -0.27
RPP40-201ENST00000319533 TMEM178AQ8NBL3 297 aa13.38□□□□□ -0.27
RPP40-201ENST00000319533 ACBD4Q8NC06 268 aa13.38□□□□□ -0.27
RPP40-201ENST00000319533 KCT2Q8NC54 265 aa13.38□□□□□ -0.27
RPP40-201ENST00000319533 CALML6Q8TD86 181 aa13.38□□□□□ -0.27
RPP40-201ENST00000319533 ZNF592Q92610 1267 aa13.38□□□□□ -0.27
RPP40-201ENST00000319533 MAGED4Q96JG8 741 aa13.38□□□□□ -0.27
RPP40-201ENST00000319533 MACROD1Q9BQ69 325 aa13.38□□□□□ -0.27
RPP40-201ENST00000319533 TRIM51Q9BSJ1 452 aa13.38□□□□□ -0.27
RPP40-201ENST00000319533 SARGQ9BW04 601 aa13.38□□□□□ -0.27
RPP40-201ENST00000319533 SGPP1Q9BX95 441 aa13.38□□□□□ -0.27
RPP40-201ENST00000319533 HES7Q9BYE0 225 aa13.38□□□□□ -0.27
RPP40-201ENST00000319533 ANKHQ9HCJ1 492 aa13.38□□□□□ -0.27
RPP40-201ENST00000319533 SH2B3Q9UQQ2 575 aa13.38□□□□□ -0.27
RPP40-201ENST00000319533 MEMO1Q9Y316 297 aa13.38□□□□□ -0.27
RPP40-201ENST00000319533 C19orf84I3L1E1 186 aa13.37□□□□□ -0.27
RPP40-201ENST00000319533 RDH16O75452 317 aa13.37□□□□□ -0.27
RPP40-201ENST00000319533 CLDN14O95500 239 aa13.37□□□□□ -0.27
RPP40-201ENST00000319533 SP1P08047 785 aa13.37□□□□□ -0.27
RPP40-201ENST00000319533 F7P08709 466 aaPredicted RBP13.37□□□□□ -0.27
RPP40-201ENST00000319533 ESRRAP11474 423 aaPredicted RBP13.37□□□□□ -0.27
RPP40-201ENST00000319533 PGAM1P18669 254 aa13.37□□□□□ -0.27
RPP40-201ENST00000319533 CCND1P24385 295 aa13.37□□□□□ -0.27
RPP40-201ENST00000319533 CASQ1P31415 396 aa13.37□□□□□ -0.27
RPP40-201ENST00000319533 USP10Q14694 798 aaKnown RBP13.37□□□□□ -0.27
RPP40-201ENST00000319533 MORF4L2Q15014 288 aa13.37□□□□□ -0.27
RPP40-201ENST00000319533 ABRAXAS2Q15018 415 aa13.37□□□□□ -0.27
RPP40-201ENST00000319533 NSDHLQ15738 373 aa13.37□□□□□ -0.27
RPP40-201ENST00000319533 SFT2D3Q587I9 215 aa13.37□□□□□ -0.27
RPP40-201ENST00000319533 CAPN13Q6MZZ7 669 aaPredicted RBP13.37□□□□□ -0.27
RPP40-201ENST00000319533 LRRC8EQ6NSJ5 796 aa13.37□□□□□ -0.27
RPP40-201ENST00000319533 SLC26A11Q86WA9 606 aa13.37□□□□□ -0.27
RPP40-201ENST00000319533 CHERPQ8IWX8 916 aaKnown RBP13.37□□□□□ -0.27
RPP40-201ENST00000319533 SLC5A8Q8N695 610 aa13.37□□□□□ -0.27
RPP40-201ENST00000319533 HORMAD2Q8N7B1 307 aa13.37□□□□□ -0.27
RPP40-201ENST00000319533 MFSD9Q8NBP5 474 aa13.37□□□□□ -0.27
RPP40-201ENST00000319533 GABPB2Q8TAK5 448 aaPredicted RBP13.37□□□□□ -0.27
RPP40-201ENST00000319533 ELP5Q8TE02 316 aa13.37□□□□□ -0.27
RPP40-201ENST00000319533 PHF10Q8WUB8 498 aaKnown RBP13.37□□□□□ -0.27
RPP40-201ENST00000319533 SLC13A3Q8WWT9 602 aa13.37□□□□□ -0.27
RPP40-201ENST00000319533 MTFMTQ96DP5 389 aaKnown RBP13.37□□□□□ -0.27
RPP40-201ENST00000319533 LPAR4Q99677 370 aa13.37□□□□□ -0.27
RPP40-201ENST00000319533 NAT9Q9BTE0 207 aa13.37□□□□□ -0.27
RPP40-201ENST00000319533 AARSD1Q9BTE6 412 aaKnown RBP13.37□□□□□ -0.27
RPP40-201ENST00000319533 TRIM45Q9H8W5 580 aaPredicted RBP13.37□□□□□ -0.27
RPP40-201ENST00000319533 KLHL1Q9NR64 748 aa13.37□□□□□ -0.27
RPP40-201ENST00000319533 C20orf96Q9NUD7 363 aaPredicted RBP13.37□□□□□ -0.27
RPP40-201ENST00000319533 ADAMTS6Q9UKP5 1117 aa13.37□□□□□ -0.27
RPP40-201ENST00000319533 FBXO5Q9UKT4 447 aa13.37□□□□□ -0.27
RPP40-201ENST00000319533 PDE10AQ9Y233 779 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms