RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 DEPDC1Q5TB30 811 aa26.2■■□□□ 1.79
CTDNEP1-201ENST00000318988 MCATQ8IVS2 390 aaKnown RBP26.2■■□□□ 1.79
CTDNEP1-201ENST00000318988 PARP9Q8IXQ6 854 aa26.2■■□□□ 1.79
CTDNEP1-201ENST00000318988 FAM60AQ9NP50 221 aa26.2■■□□□ 1.79
CTDNEP1-201ENST00000318988 NOP53Q9NZM5 478 aaKnown RBP26.2■■□□□ 1.79
CTDNEP1-201ENST00000318988 HEATR5BQ9P2D3 2071 aa26.2■■□□□ 1.78
CTDNEP1-201ENST00000318988 COL5A1P20908 1838 aaPredicted RBP26.2■■□□□ 1.78
CTDNEP1-201ENST00000318988 MUC6Q6W4X9 2439 aa26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 H0YGG7 62 aa26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 FCHO1O14526 889 aa26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 CBFA2T3O75081 653 aa26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 ETHE1O95571 254 aa26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 STATHP02808 62 aa26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 EIF2S1P05198 315 aaKnown RBP26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 ARF3P61204 181 aaPredicted RBP26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 RFTN2Q52LD8 501 aaPredicted RBP26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 DNAJC22Q8N4W6 341 aa26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 APIPQ96GX9 242 aa26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 MARK4Q96L34 752 aa26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 F2RL3Q96RI0 385 aa26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 C1orf50Q9BV19 199 aa26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 MRPL1Q9BYD6 325 aaKnown RBP26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 REXO4Q9GZR2 422 aaKnown RBP26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 SEMA5BQ9P283 1151 aa26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 URADA6NGE7 173 aa26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 SAP18O00422 153 aaKnown RBP26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 CASC3O15234 703 aaKnown RBP26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 SNRNP200O75643 2136 aaKnown RBP26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 SEMA3DO95025 777 aa26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 ACADVLP49748 655 aa26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 VSX2P58304 361 aaPredicted RBP26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 TGM3Q08188 693 aa26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 TOR1AIP1Q5JTV8 583 aa26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 FRMPD2BQ6IN97 320 aa26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 VN1R4Q7Z5H5 301 aa26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 RGMAQ96B86 450 aa26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 NMUR2Q9GZQ4 415 aa26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 PLCL2Q9UPR0 1127 aa26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 RUVBL1Q9Y265 456 aaKnown RBP26.19■■□□□ 1.78
CTDNEP1-201ENST00000318988 OTOGLQ3ZCN5 2332 aa26.18■■□□□ 1.78
CTDNEP1-201ENST00000318988 LOC105369274A0A096LPK9 316 aa26.18■■□□□ 1.78
CTDNEP1-201ENST00000318988 LOC102723532A0A0G2JNH3 316 aa26.18■■□□□ 1.78
CTDNEP1-201ENST00000318988 LRIT2A6NDA9 550 aa26.18■■□□□ 1.78
CTDNEP1-201ENST00000318988 TXNDC9O14530 226 aa26.18■■□□□ 1.78
CTDNEP1-201ENST00000318988 SRPX2O60687 465 aaPredicted RBP26.18■■□□□ 1.78
CTDNEP1-201ENST00000318988 IDO1P14902 403 aa26.18■■□□□ 1.78
CTDNEP1-201ENST00000318988 IRX1P78414 480 aaPredicted RBP26.18■■□□□ 1.78
CTDNEP1-201ENST00000318988 GSTA3Q16772 222 aa26.18■■□□□ 1.78
CTDNEP1-201ENST00000318988 DEFB110Q30KQ9 67 aa26.18■■□□□ 1.78
CTDNEP1-201ENST00000318988 IL23RQ5VWK5 629 aa26.18■■□□□ 1.78
CTDNEP1-201ENST00000318988 OR4N4Q8N0Y3 316 aa26.18■■□□□ 1.78
CTDNEP1-201ENST00000318988 C1orf52Q8N6N3 182 aaKnown RBP26.18■■□□□ 1.78
CTDNEP1-201ENST00000318988 SRFBP1Q8NEF9 429 aaKnown RBP26.18■■□□□ 1.78
CTDNEP1-201ENST00000318988 NT5CQ8TCD5 201 aa26.18■■□□□ 1.78
CTDNEP1-201ENST00000318988 KLHL6Q8WZ60 621 aa26.18■■□□□ 1.78
CTDNEP1-201ENST00000318988 MACROD1Q9BQ69 325 aa26.18■■□□□ 1.78
CTDNEP1-201ENST00000318988 ZNF768Q9H5H4 540 aaKnown RBP26.18■■□□□ 1.78
CTDNEP1-201ENST00000318988 IRAK4Q9NWZ3 460 aa26.18■■□□□ 1.78
CTDNEP1-201ENST00000318988 POLR3HQ9Y535 204 aaPredicted RBP26.18■■□□□ 1.78
CTDNEP1-201ENST00000318988 NTN3O00634 580 aaPredicted RBP26.17■■□□□ 1.78
CTDNEP1-201ENST00000318988 TBL3Q12788 808 aaKnown RBP26.17■■□□□ 1.78
CTDNEP1-201ENST00000318988 CCDC157Q569K6 752 aa26.17■■□□□ 1.78
CTDNEP1-201ENST00000318988 MANEAQ5SRI9 462 aa26.17■■□□□ 1.78
CTDNEP1-201ENST00000318988 ZNF574Q6ZN55 896 aaPredicted RBP26.17■■□□□ 1.78
CTDNEP1-201ENST00000318988 PAGE2Q7Z2X7 111 aa26.17■■□□□ 1.78
CTDNEP1-201ENST00000318988 CSNK1A1LQ8N752 337 aa26.17■■□□□ 1.78
CTDNEP1-201ENST00000318988 CHTF18Q8WVB6 975 aa26.17■■□□□ 1.78
CTDNEP1-201ENST00000318988 TM4SF19Q96DZ7 209 aa26.17■■□□□ 1.78
CTDNEP1-201ENST00000318988 SAR1AQ9NR31 198 aa26.17■■□□□ 1.78
CTDNEP1-201ENST00000318988 PDP2Q9P2J9 529 aa26.17■■□□□ 1.78
CTDNEP1-201ENST00000318988 RP1P56715 2156 aa26.16■■□□□ 1.78
CTDNEP1-201ENST00000318988 IGHV5-10-1A0A0J9YXX1 117 aa26.16■■□□□ 1.78
CTDNEP1-201ENST00000318988 LOC105378220A0A1B0GUY1 285 aaPredicted RBP26.16■■□□□ 1.78
CTDNEP1-201ENST00000318988 D6RAR5 112 aa26.16■■□□□ 1.78
CTDNEP1-201ENST00000318988 EBAG9O00559 213 aa26.16■■□□□ 1.78
CTDNEP1-201ENST00000318988 ZSCAN9O15535 394 aaPredicted RBP26.16■■□□□ 1.78
CTDNEP1-201ENST00000318988 ALDOCP09972 364 aaKnown RBP26.16■■□□□ 1.78
CTDNEP1-201ENST00000318988 ANKRD34CP0C6C1 535 aa26.16■■□□□ 1.78
CTDNEP1-201ENST00000318988 NELFEP18615 380 aaKnown RBP26.16■■□□□ 1.78
CTDNEP1-201ENST00000318988 HNRNPH1P31943 449 aaKnown RBP26.16■■□□□ 1.78
CTDNEP1-201ENST00000318988 E2F1Q01094 437 aa26.16■■□□□ 1.78
CTDNEP1-201ENST00000318988 ILKQ13418 452 aa26.16■■□□□ 1.78
CTDNEP1-201ENST00000318988 SQLEQ14534 574 aa26.16■■□□□ 1.78
CTDNEP1-201ENST00000318988 TRIM40Q6P9F5 258 aa26.16■■□□□ 1.78
CTDNEP1-201ENST00000318988 TRPM8Q7Z2W7 1104 aa26.16■■□□□ 1.78
CTDNEP1-201ENST00000318988 TMPRSS9Q7Z410 1059 aa26.16■■□□□ 1.78
CTDNEP1-201ENST00000318988 METTL4Q8N3J2 472 aa26.16■■□□□ 1.78
CTDNEP1-201ENST00000318988 ERP27Q96DN0 273 aa26.16■■□□□ 1.78
CTDNEP1-201ENST00000318988 SLC41A2Q96JW4 573 aa26.16■■□□□ 1.78
CTDNEP1-201ENST00000318988 QRFPRQ96P65 431 aa26.16■■□□□ 1.78
CTDNEP1-201ENST00000318988 ASXL3Q9C0F0 2248 aa26.15■■□□□ 1.78
CTDNEP1-201ENST00000318988 THRAP10827 490 aa26.15■■□□□ 1.78
CTDNEP1-201ENST00000318988 NHLH1Q02575 133 aa26.15■■□□□ 1.78
CTDNEP1-201ENST00000318988 KIAA0040Q15053 153 aa26.15■■□□□ 1.78
CTDNEP1-201ENST00000318988 PHF19Q5T6S3 580 aa26.15■■□□□ 1.78
CTDNEP1-201ENST00000318988 NOXRED1Q6NXP6 359 aa26.15■■□□□ 1.78
CTDNEP1-201ENST00000318988 ASCL5Q7RTU5 278 aa26.15■■□□□ 1.78
CTDNEP1-201ENST00000318988 COMMD6Q7Z4G1 85 aa26.15■■□□□ 1.78
CTDNEP1-201ENST00000318988 D2HGDHQ8N465 521 aa26.15■■□□□ 1.78
CTDNEP1-201ENST00000318988 CCDC74BQ96LY2 380 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms