RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 RACK1P63244 317 aaKnown RBP12.16□□□□□ -0.46
PTPN6-201ENST00000318974 HMGCS1Q01581 520 aa12.16□□□□□ -0.46
PTPN6-201ENST00000318974 DMWDQ09019 674 aa12.16□□□□□ -0.46
PTPN6-201ENST00000318974 DOC2AQ14183 400 aa12.16□□□□□ -0.46
PTPN6-201ENST00000318974 FAM174BQ3ZCQ3 159 aa12.16□□□□□ -0.46
PTPN6-201ENST00000318974 PRAMEF14Q5SWL7 426 aa12.16□□□□□ -0.46
PTPN6-201ENST00000318974 PRAMEF13Q5VWM6 474 aa12.16□□□□□ -0.46
PTPN6-201ENST00000318974 LCTLQ6UWM7 567 aa12.16□□□□□ -0.46
PTPN6-201ENST00000318974 PARGQ86W56 976 aa12.16□□□□□ -0.46
PTPN6-201ENST00000318974 NRROSQ86YC3 692 aa12.16□□□□□ -0.46
PTPN6-201ENST00000318974 LIX1Q8N485 282 aa12.16□□□□□ -0.46
PTPN6-201ENST00000318974 TRIML2Q8N7C3 387 aa12.16□□□□□ -0.46
PTPN6-201ENST00000318974 ZFP28Q8NHY6 868 aa12.16□□□□□ -0.46
PTPN6-201ENST00000318974 SELENOMQ8WWX9 145 aa12.16□□□□□ -0.46
PTPN6-201ENST00000318974 HSPA12BQ96MM6 686 aa12.16□□□□□ -0.46
PTPN6-201ENST00000318974 CHID1Q9BWS9 393 aa12.16□□□□□ -0.46
PTPN6-201ENST00000318974 RAB11FIP5Q9BXF6 653 aa12.16□□□□□ -0.46
PTPN6-201ENST00000318974 GSDMCQ9BYG8 508 aa12.16□□□□□ -0.46
PTPN6-201ENST00000318974 ELOVL6Q9H5J4 265 aa12.16□□□□□ -0.46
PTPN6-201ENST00000318974 CAAP1Q9H8G2 361 aa12.16□□□□□ -0.46
PTPN6-201ENST00000318974 GORASP2Q9H8Y8 452 aa12.16□□□□□ -0.46
PTPN6-201ENST00000318974 VAPAQ9P0L0 249 aa12.16□□□□□ -0.46
PTPN6-201ENST00000318974 USP22Q9UPT9 525 aa12.16□□□□□ -0.46
PTPN6-201ENST00000318974 COLEC10Q9Y6Z7 277 aa12.16□□□□□ -0.46
PTPN6-201ENST00000318974 A0A1W2PR77 199 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 PLOD2O00469 737 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 KDM1AO60341 852 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 PGRP06401 933 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 ETS2P15036 469 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 NDUFS1P28331 727 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 HOXA6P31267 233 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 SELPLGQ14242 412 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 SGO1Q5FBB7 561 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 GRHL2Q6ISB3 625 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 TMPRSS11BQ86T26 416 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 IQCHQ86VS3 1027 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 RIMKLAQ8IXN7 391 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 PHACTR4Q8IZ21 702 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 C2orf73Q8N5S3 287 aaPredicted RBP12.15□□□□□ -0.46
PTPN6-201ENST00000318974 GPBAR1Q8TDU6 330 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 NEIL2Q969S2 332 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 MTFMTQ96DP5 389 aaKnown RBP12.15□□□□□ -0.46
PTPN6-201ENST00000318974 RNF145Q96MT1 663 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 ZNF583Q96ND8 569 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 SEPHS2Q99611 448 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 MIR1-1HGQ9H1L0 117 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 SMPD3Q9NY59 655 aaPredicted RBP12.15□□□□□ -0.46
PTPN6-201ENST00000318974 TUBA8Q9NY65 449 aaPredicted RBP12.15□□□□□ -0.46
PTPN6-201ENST00000318974 CCDC163A0A0D9SF12 145 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 EI24O14681 340 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 DFNA5O60443 496 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 EML2O95834 649 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 WNT1P04628 370 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 RAP2AP10114 183 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 CTSEP14091 401 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 CD22P20273 847 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 PRPH2P23942 346 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 SOX11P35716 441 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 E2F2Q14209 437 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 FAM98BQ52LJ0 330 aaKnown RBP12.15□□□□□ -0.46
PTPN6-201ENST00000318974 ZNF542PQ5EBM4 170 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 B3GNT6Q6ZMB0 384 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 SLCO4C1Q6ZQN7 724 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 LPCAT2Q7L5N7 544 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 OR2T12Q8NG77 320 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 OR52E4Q8NGH9 312 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 OR52E1Q8NGJ3 308 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 SLC5A11Q8WWX8 675 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 SMPDL3AQ92484 453 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 NMD3Q96D46 503 aaKnown RBP12.15□□□□□ -0.46
PTPN6-201ENST00000318974 SH3GL3Q99963 347 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 PCBD2Q9H0N5 130 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 TCEAL2Q9H3H9 227 aaPredicted RBP12.15□□□□□ -0.46
PTPN6-201ENST00000318974 PIF1Q9H611 641 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 TM9SF3Q9HD45 589 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 KLF15Q9UIH9 416 aa12.15□□□□□ -0.46
PTPN6-201ENST00000318974 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.14□□□□□ -0.47
PTPN6-201ENST00000318974 A6NCN8 305 aa12.14□□□□□ -0.47
PTPN6-201ENST00000318974 NPIPB8E9PQR5 432 aa12.14□□□□□ -0.47
PTPN6-201ENST00000318974 CLOCKO15516 846 aa12.14□□□□□ -0.47
PTPN6-201ENST00000318974 DEAF1O75398 565 aaPredicted RBP12.14□□□□□ -0.47
PTPN6-201ENST00000318974 BMP10O95393 424 aa12.14□□□□□ -0.47
PTPN6-201ENST00000318974 PDYNP01213 254 aa12.14□□□□□ -0.47
PTPN6-201ENST00000318974 C1GALT1C1LP0DN25 315 aa12.14□□□□□ -0.47
PTPN6-201ENST00000318974 BCKDHAP12694 445 aa12.14□□□□□ -0.47
PTPN6-201ENST00000318974 F3P13726 295 aa12.14□□□□□ -0.47
PTPN6-201ENST00000318974 PKLRP30613 574 aa12.14□□□□□ -0.47
PTPN6-201ENST00000318974 ALDH3B2P48448 385 aa12.14□□□□□ -0.47
PTPN6-201ENST00000318974 RAB28P51157 221 aa12.14□□□□□ -0.47
PTPN6-201ENST00000318974 ZNF33BQ06732 778 aa12.14□□□□□ -0.47
PTPN6-201ENST00000318974 CYP4F3Q08477 520 aa12.14□□□□□ -0.47
PTPN6-201ENST00000318974 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.14□□□□□ -0.47
PTPN6-201ENST00000318974 SPANXN4Q5MJ08 99 aa12.14□□□□□ -0.47
PTPN6-201ENST00000318974 FRG2Q64ET8 278 aa12.14□□□□□ -0.47
PTPN6-201ENST00000318974 ATG9BQ674R7 924 aa12.14□□□□□ -0.47
PTPN6-201ENST00000318974 TSSK4Q6SA08 328 aa12.14□□□□□ -0.47
PTPN6-201ENST00000318974 TMEFF1Q8IYR6 380 aa12.14□□□□□ -0.47
PTPN6-201ENST00000318974 DHRSXQ8N5I4 330 aa12.14□□□□□ -0.47
PTPN6-201ENST00000318974 SH3KBP1Q96B97 665 aa12.14□□□□□ -0.47
PTPN6-201ENST00000318974 CXorf40BQ96DE9 158 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms